RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 HMSDA8MTL9 139 aa4.04□□□□□ -1.76
HLA-DQA1-204ENST00000422863 PFN2P35080 140 aa4.04□□□□□ -1.76
HLA-DQA1-204ENST00000422863 TCTE3Q8IZS6 198 aa4.04□□□□□ -1.76
HLA-DQA1-204ENST00000422863 COX7B2Q8TF08 81 aa4.04□□□□□ -1.76
HLA-DQA1-204ENST00000422863 AMELXQ99217 191 aa4.04□□□□□ -1.76
HLA-DQA1-204ENST00000422863 OSTCQ9NRP0 149 aa4.04□□□□□ -1.76
HLA-DQA1-204ENST00000422863 V9GYV3 84 aa4.04□□□□□ -1.76
HLA-DQA1-204ENST00000422863 RAB14P61106 215 aa4.03□□□□□ -1.76
HLA-DQA1-204ENST00000422863 MOBPQ13875 183 aa4.03□□□□□ -1.76
HLA-DQA1-204ENST00000422863 LINC01551Q86U37 167 aa4.03□□□□□ -1.76
HLA-DQA1-204ENST00000422863 SMCR5Q8TEV8 140 aa4.03□□□□□ -1.76
HLA-DQA1-204ENST00000422863 SLC25A20O43772 301 aa4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 SNAPINO95295 136 aa4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 VPREB1P12018 145 aa4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 CXCL5P42830 114 aa4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 HERVK_113P63121 156 aa4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 FAM74A3Q4VXF1 159 aa4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 MRPL54Q6P161 138 aaKnown RBP4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 FAM19A3Q7Z5A8 133 aa4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 FAM19A2Q8N3H0 131 aa4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 Q8NDZ9 215 aa4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 SMIM7Q9BQ49 75 aa4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 GEMIN7Q9H840 131 aaKnown RBP4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 NAT8BQ9UHF3 227 aa4.02□□□□□ -1.77
HLA-DQA1-204ENST00000422863 TMEM250H0YL14 139 aa4.01□□□□□ -1.77
HLA-DQA1-204ENST00000422863 SPINK8P0C7L1 97 aa4.01□□□□□ -1.77
HLA-DQA1-204ENST00000422863 TAGLN2P37802 199 aaKnown RBP4.01□□□□□ -1.77
HLA-DQA1-204ENST00000422863 GAGE2AQ6NT46 116 aa4.01□□□□□ -1.77
HLA-DQA1-204ENST00000422863 CYSLTR1Q9Y271 337 aa4.01□□□□□ -1.77
HLA-DQA1-204ENST00000422863 ZNF706Q9Y5V0 76 aaPredicted RBP4.01□□□□□ -1.77
HLA-DQA1-204ENST00000422863 PCP4L1A6NKN8 68 aa4□□□□□ -1.77
HLA-DQA1-204ENST00000422863 SMIM1B2RUZ4 78 aa4□□□□□ -1.77
HLA-DQA1-204ENST00000422863 PDZD11Q5EBL8 140 aa4□□□□□ -1.77
HLA-DQA1-204ENST00000422863 CLLU1Q5K131 121 aa4□□□□□ -1.77
HLA-DQA1-204ENST00000422863 TMEM136Q6ZRR5 245 aa4□□□□□ -1.77
HLA-DQA1-204ENST00000422863 PRELID3AQ96N28 172 aa4□□□□□ -1.77
HLA-DQA1-204ENST00000422863 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
HLA-DQA1-204ENST00000422863 SND1-IT1Q9HBX3 110 aa4□□□□□ -1.77
HLA-DQA1-204ENST00000422863 SMIM27A0A1W2PRY6 76 aa3.99□□□□□ -1.77
HLA-DQA1-204ENST00000422863 IGIPA6NJ69 53 aa3.99□□□□□ -1.77
HLA-DQA1-204ENST00000422863 RPL24P83731 157 aaKnown RBP3.99□□□□□ -1.77
HLA-DQA1-204ENST00000422863 TIMM17AQ99595 171 aa3.99□□□□□ -1.77
HLA-DQA1-204ENST00000422863 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
HLA-DQA1-204ENST00000422863 F8W036 122 aa3.98□□□□□ -1.77
HLA-DQA1-204ENST00000422863 NPSP0C0P6 89 aa3.98□□□□□ -1.77
HLA-DQA1-204ENST00000422863 RPS29P62273 56 aaKnown RBP3.98□□□□□ -1.77
HLA-DQA1-204ENST00000422863 SEC11AP67812 179 aa3.98□□□□□ -1.77
HLA-DQA1-204ENST00000422863 ANKRD39Q53RE8 183 aa3.98□□□□□ -1.77
HLA-DQA1-204ENST00000422863 Q6Q795 121 aa3.98□□□□□ -1.77
HLA-DQA1-204ENST00000422863 SSBP3-AS1Q7Z2R9 100 aa3.98□□□□□ -1.77
HLA-DQA1-204ENST00000422863 ORMDL3Q8N138 153 aa3.98□□□□□ -1.77
HLA-DQA1-204ENST00000422863 ZNF625Q96I27 306 aaPredicted RBP3.98□□□□□ -1.77
HLA-DQA1-204ENST00000422863 A0A1B0GW15 77 aa3.97□□□□□ -1.77
HLA-DQA1-204ENST00000422863 ATP5LO75964 103 aa3.97□□□□□ -1.77
HLA-DQA1-204ENST00000422863 PPBPP02775 128 aa3.97□□□□□ -1.77
HLA-DQA1-204ENST00000422863 RPL23P62829 140 aaKnown RBP3.97□□□□□ -1.77
HLA-DQA1-204ENST00000422863 HRCT1Q6UXD1 115 aa3.97□□□□□ -1.77
HLA-DQA1-204ENST00000422863 COMMD7Q86VX2 200 aa3.97□□□□□ -1.77
HLA-DQA1-204ENST00000422863 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
HLA-DQA1-204ENST00000422863 A0A1B0GXF2 115 aa3.96□□□□□ -1.78
HLA-DQA1-204ENST00000422863 ERC2-IT1O76042 136 aa3.96□□□□□ -1.78
HLA-DQA1-204ENST00000422863 IGLV6-57P01721 117 aa3.96□□□□□ -1.78
HLA-DQA1-204ENST00000422863 SRP19P09132 144 aaKnown RBP3.96□□□□□ -1.78
HLA-DQA1-204ENST00000422863 ADIRFQ15847 76 aa3.96□□□□□ -1.78
HLA-DQA1-204ENST00000422863 LINC00483Q53H64 154 aa3.96□□□□□ -1.78
HLA-DQA1-204ENST00000422863 Q8N8P6 123 aa3.96□□□□□ -1.78
HLA-DQA1-204ENST00000422863 C12orf57Q99622 126 aa3.96□□□□□ -1.78
HLA-DQA1-204ENST00000422863 MAP1LC3AQ9H492 121 aa3.96□□□□□ -1.78
HLA-DQA1-204ENST00000422863 TINCRA0A1B0GVN0 87 aa3.95□□□□□ -1.78
HLA-DQA1-204ENST00000422863 S100A8P05109 93 aa3.95□□□□□ -1.78
HLA-DQA1-204ENST00000422863 SMIM6P0DI80 62 aa3.95□□□□□ -1.78
HLA-DQA1-204ENST00000422863 ADCYAP1P18509 176 aa3.95□□□□□ -1.78
HLA-DQA1-204ENST00000422863 S100PP25815 95 aa3.95□□□□□ -1.78
HLA-DQA1-204ENST00000422863 ORMDL2Q53FV1 153 aa3.95□□□□□ -1.78
HLA-DQA1-204ENST00000422863 C9orf153Q5TBE3 101 aa3.95□□□□□ -1.78
HLA-DQA1-204ENST00000422863 ERG28Q9UKR5 140 aa3.95□□□□□ -1.78
HLA-DQA1-204ENST00000422863 A0A0U1RRA0 63 aa3.94□□□□□ -1.78
HLA-DQA1-204ENST00000422863 ETDCA0A1B0GVM5 59 aa3.94□□□□□ -1.78
HLA-DQA1-204ENST00000422863 PRSS47A8MTI9 375 aa3.94□□□□□ -1.78
HLA-DQA1-204ENST00000422863 CFC1P0CG37 223 aa3.94□□□□□ -1.78
HLA-DQA1-204ENST00000422863 IGLV5-45A0A087WSX0 123 aa3.93□□□□□ -1.78
HLA-DQA1-204ENST00000422863 PRYO14603 147 aa3.93□□□□□ -1.78
HLA-DQA1-204ENST00000422863 NCR3O14931 201 aa3.93□□□□□ -1.78
HLA-DQA1-204ENST00000422863 BLOC1S1P78537 153 aa3.93□□□□□ -1.78
HLA-DQA1-204ENST00000422863 PAPPA-AS1Q5QFB9 102 aa3.93□□□□□ -1.78
HLA-DQA1-204ENST00000422863 ALKAL2Q6UX46 152 aa3.93□□□□□ -1.78
HLA-DQA1-204ENST00000422863 SCGB3A1Q96QR1 104 aa3.93□□□□□ -1.78
HLA-DQA1-204ENST00000422863 AKR1D1P51857 326 aa3.92□□□□□ -1.78
HLA-DQA1-204ENST00000422863 TOMM6Q96B49 74 aa3.92□□□□□ -1.78
HLA-DQA1-204ENST00000422863 CBY1Q9Y3M2 126 aa3.92□□□□□ -1.78
HLA-DQA1-204ENST00000422863 SPRR1AP35321 89 aa3.91□□□□□ -1.78
HLA-DQA1-204ENST00000422863 LINC00158P58513 81 aa3.91□□□□□ -1.78
HLA-DQA1-204ENST00000422863 RPL37P61927 97 aaKnown RBP3.91□□□□□ -1.78
HLA-DQA1-204ENST00000422863 CST9LQ9H4G1 147 aa3.91□□□□□ -1.78
HLA-DQA1-204ENST00000422863 TRBV10-3A0A0K0K1G6 114 aa3.9□□□□□ -1.79
HLA-DQA1-204ENST00000422863 LINC00587B1AMM8 73 aa3.9□□□□□ -1.79
HLA-DQA1-204ENST00000422863 B5MCH6 92 aa3.9□□□□□ -1.79
HLA-DQA1-204ENST00000422863 C9JQL5 133 aa3.9□□□□□ -1.79
HLA-DQA1-204ENST00000422863 COX17Q14061 63 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms