RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 FAM236AA0A1B0GUQ0 79 aa7.45□□□□□ -1.22
DDX56-203ENST00000421223 FAM236BA0A1B0GV22 79 aa7.45□□□□□ -1.22
DDX56-203ENST00000421223 NCR3O14931 201 aa7.45□□□□□ -1.22
DDX56-203ENST00000421223 HIGD2BQ4VC39 106 aa7.45□□□□□ -1.22
DDX56-203ENST00000421223 PRO0628Q9UI54 55 aa7.45□□□□□ -1.22
DDX56-203ENST00000421223 A0A087WYN8 130 aa7.44□□□□□ -1.22
DDX56-203ENST00000421223 CYSRT1A8MQ03 144 aa7.44□□□□□ -1.22
DDX56-203ENST00000421223 KIAA0087Q14695 138 aa7.44□□□□□ -1.22
DDX56-203ENST00000421223 ENHOQ6UWT2 76 aa7.44□□□□□ -1.22
DDX56-203ENST00000421223 LECT2O14960 151 aa7.44□□□□□ -1.22
DDX56-203ENST00000421223 DEFB131BA0A096LNP1 70 aa7.42□□□□□ -1.22
DDX56-203ENST00000421223 RPL28P46779 137 aaKnown RBP7.42□□□□□ -1.22
DDX56-203ENST00000421223 C1orf195Q5TG92 126 aa7.42□□□□□ -1.22
DDX56-203ENST00000421223 C11orf45Q8TAV5 145 aa7.42□□□□□ -1.22
DDX56-203ENST00000421223 XAGE1AQ9HD64 81 aa7.42□□□□□ -1.22
DDX56-203ENST00000421223 A0A0U1RQV1 116 aa7.42□□□□□ -1.22
DDX56-203ENST00000421223 SNCGO76070 127 aa7.42□□□□□ -1.22
DDX56-203ENST00000421223 C15orf53Q8NAA6 179 aa7.42□□□□□ -1.22
DDX56-203ENST00000421223 FAM240AA0A1B0GVK7 77 aa7.41□□□□□ -1.22
DDX56-203ENST00000421223 S100A7L2Q5SY68 101 aa7.41□□□□□ -1.22
DDX56-203ENST00000421223 ESRGQ1W209 222 aa7.41□□□□□ -1.22
DDX56-203ENST00000421223 Q6Q795 121 aa7.4□□□□□ -1.22
DDX56-203ENST00000421223 C2orf48Q96LS8 159 aa7.4□□□□□ -1.22
DDX56-203ENST00000421223 C9orf153Q5TBE3 101 aa7.4□□□□□ -1.23
DDX56-203ENST00000421223 IGKV2D-24A0A075B6R9 120 aa7.39□□□□□ -1.23
DDX56-203ENST00000421223 TRACP01848 142 aa7.39□□□□□ -1.23
DDX56-203ENST00000421223 ANK2Q01484 3957 aa7.39□□□□□ -1.23
DDX56-203ENST00000421223 RPL18AQ02543 176 aaKnown RBP7.39□□□□□ -1.23
DDX56-203ENST00000421223 CXCL5P42830 114 aa7.38□□□□□ -1.23
DDX56-203ENST00000421223 Q8NDZ9 215 aa7.38□□□□□ -1.23
DDX56-203ENST00000421223 C22orf24Q9Y442 160 aa7.38□□□□□ -1.23
DDX56-203ENST00000421223 GAGE2AQ6NT46 116 aa7.38□□□□□ -1.23
DDX56-203ENST00000421223 LINC00336Q6ZUF6 198 aa7.38□□□□□ -1.23
DDX56-203ENST00000421223 EGFEM1PQ0D2K5 195 aa7.37□□□□□ -1.23
DDX56-203ENST00000421223 CAMK2N2Q96S95 79 aa7.37□□□□□ -1.23
DDX56-203ENST00000421223 PRR34Q9NV39 138 aa7.37□□□□□ -1.23
DDX56-203ENST00000421223 H0YGX0 51 aa7.37□□□□□ -1.23
DDX56-203ENST00000421223 C6orf99Q4VX62 202 aa7.37□□□□□ -1.23
DDX56-203ENST00000421223 C9orf129Q5T035 196 aaKnown RBP7.37□□□□□ -1.23
DDX56-203ENST00000421223 A0A1B0GX51 115 aa7.36□□□□□ -1.23
DDX56-203ENST00000421223 C14orf132Q9NPU4 83 aa7.36□□□□□ -1.23
DDX56-203ENST00000421223 LINC01561Q8N1V8 128 aa7.35□□□□□ -1.23
DDX56-203ENST00000421223 COX17Q14061 63 aa7.35□□□□□ -1.23
DDX56-203ENST00000421223 C6orf48Q9UBA6 75 aa7.35□□□□□ -1.23
DDX56-203ENST00000421223 ACYP1P07311 99 aa7.34□□□□□ -1.23
DDX56-203ENST00000421223 Q5XG85 94 aa7.33□□□□□ -1.24
DDX56-203ENST00000421223 TRBV7-7A0A0K0K1E9 115 aa7.33□□□□□ -1.24
DDX56-203ENST00000421223 STAB2Q8WWQ8 2551 aa7.33□□□□□ -1.24
DDX56-203ENST00000421223 SDIM1Q6ZPB5 146 aa7.32□□□□□ -1.24
DDX56-203ENST00000421223 Q6ZRU5 148 aa7.32□□□□□ -1.24
DDX56-203ENST00000421223 ORMDL1Q9P0S3 153 aa7.32□□□□□ -1.24
DDX56-203ENST00000421223 SMCR5Q8TEV8 140 aa7.31□□□□□ -1.24
DDX56-203ENST00000421223 RPS28P62857 69 aaKnown RBP7.31□□□□□ -1.24
DDX56-203ENST00000421223 TRBV10-3A0A0K0K1G6 114 aa7.3□□□□□ -1.24
DDX56-203ENST00000421223 NDUFC2O95298 119 aa7.3□□□□□ -1.24
DDX56-203ENST00000421223 OXTP01178 125 aa7.3□□□□□ -1.24
DDX56-203ENST00000421223 H3BNG1 76 aa7.3□□□□□ -1.24
DDX56-203ENST00000421223 K7EIL1 84 aa7.3□□□□□ -1.24
DDX56-203ENST00000421223 INAFM2P0DMQ5 153 aa7.3□□□□□ -1.24
DDX56-203ENST00000421223 Q8N814 137 aa7.29□□□□□ -1.24
DDX56-203ENST00000421223 FAM19A1Q7Z5A9 133 aa7.28□□□□□ -1.24
DDX56-203ENST00000421223 DSCR8Q96T75 97 aa7.28□□□□□ -1.24
DDX56-203ENST00000421223 C15orf56Q8N910 161 aa7.28□□□□□ -1.24
DDX56-203ENST00000421223 IMUPQ9GZP8 106 aa7.27□□□□□ -1.24
DDX56-203ENST00000421223 TRAV10A0A0B4J240 114 aa7.27□□□□□ -1.25
DDX56-203ENST00000421223 LINC00643Q86TS7 51 aa7.27□□□□□ -1.25
DDX56-203ENST00000421223 OBSCN-AS1Q96MR7 158 aa7.27□□□□□ -1.25
DDX56-203ENST00000421223 LAMTOR3Q9UHA4 124 aa7.27□□□□□ -1.25
DDX56-203ENST00000421223 LINC00588Q9Y4M8 146 aa7.27□□□□□ -1.25
DDX56-203ENST00000421223 LINC01556Q5JQF7 62 aa7.26□□□□□ -1.25
DDX56-203ENST00000421223 CASC10Q5T4H9 136 aa7.26□□□□□ -1.25
DDX56-203ENST00000421223 C3orf22Q8N5N4 141 aa7.26□□□□□ -1.25
DDX56-203ENST00000421223 TENM2Q9NT68 2774 aa7.26□□□□□ -1.25
DDX56-203ENST00000421223 KRTAP26-1Q6PEX3 210 aa7.26□□□□□ -1.25
DDX56-203ENST00000421223 DPH3Q96FX2 82 aa7.25□□□□□ -1.25
DDX56-203ENST00000421223 CMYA5Q8N3K9 4069 aa7.25□□□□□ -1.25
DDX56-203ENST00000421223 hADV29S1A0JD25 119 aa7.25□□□□□ -1.25
DDX56-203ENST00000421223 SYCNQ0VAF6 134 aa7.25□□□□□ -1.25
DDX56-203ENST00000421223 TRAV23DV6A0A075B6W5 121 aa7.25□□□□□ -1.25
DDX56-203ENST00000421223 IGKV3D-7A0A0C4DH55 119 aa7.25□□□□□ -1.25
DDX56-203ENST00000421223 Q6ZQY7 126 aa7.25□□□□□ -1.25
DDX56-203ENST00000421223 Q6ZRP5 223 aa7.24□□□□□ -1.25
DDX56-203ENST00000421223 BRK1Q8WUW1 75 aa7.24□□□□□ -1.25
DDX56-203ENST00000421223 LINC00575Q6W349 94 aa7.24□□□□□ -1.25
DDX56-203ENST00000421223 DIRC1Q969H9 104 aa7.23□□□□□ -1.25
DDX56-203ENST00000421223 NDUFC2-KCTD14E9PQ53 114 aa7.23□□□□□ -1.25
DDX56-203ENST00000421223 TMEM256-PLSCR3K7ERE1 68 aa7.23□□□□□ -1.25
DDX56-203ENST00000421223 GVQW2A0A096LPI5 108 aaPredicted RBP7.22□□□□□ -1.25
DDX56-203ENST00000421223 IGLV6-57P01721 117 aa7.22□□□□□ -1.25
DDX56-203ENST00000421223 LINC00846Q9NV44 126 aa7.22□□□□□ -1.25
DDX56-203ENST00000421223 ZNF73O43830 326 aaPredicted RBP7.22□□□□□ -1.25
DDX56-203ENST00000421223 LINC00167Q96N53 147 aa7.22□□□□□ -1.25
DDX56-203ENST00000421223 MDFIQ99750 246 aa7.22□□□□□ -1.25
DDX56-203ENST00000421223 TM2D3Q9BRN9 247 aa7.22□□□□□ -1.25
DDX56-203ENST00000421223 USP17L23D6RBM5 183 aa7.21□□□□□ -1.25
DDX56-203ENST00000421223 H3BS24 57 aa7.21□□□□□ -1.26
DDX56-203ENST00000421223 UQCRQO14949 82 aa7.21□□□□□ -1.26
DDX56-203ENST00000421223 DNAH10OSP0CZ25 163 aa7.21□□□□□ -1.26
DDX56-203ENST00000421223 VPREB1P12018 145 aa7.21□□□□□ -1.26
DDX56-203ENST00000421223 NKAPP1Q8N9T2 125 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms