RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 ARL17AQ8IVW1 177 aa7.94□□□□□ -1.14
TMEM53-206ENST00000420706 LINC00474Q9P2X8 69 aa7.94□□□□□ -1.14
TMEM53-206ENST00000420706 EIF4EBP3O60516 100 aaPredicted RBP7.93□□□□□ -1.14
TMEM53-206ENST00000420706 NPC2P61916 151 aa7.93□□□□□ -1.14
TMEM53-206ENST00000420706 SRSF9Q13242 221 aaKnown RBP eCLIP7.93□□□□□ -1.14
TMEM53-206ENST00000420706 LINC00308Q8TCZ7 52 aa7.93□□□□□ -1.14
TMEM53-206ENST00000420706 SPACA4Q8TDM5 124 aa7.93□□□□□ -1.14
TMEM53-206ENST00000420706 A0A1W2PNN7 141 aa7.92□□□□□ -1.14
TMEM53-206ENST00000420706 IFITM1P13164 125 aa7.92□□□□□ -1.14
TMEM53-206ENST00000420706 Q6ZSA8 131 aa7.92□□□□□ -1.14
TMEM53-206ENST00000420706 MUSTN1Q8IVN3 82 aa7.92□□□□□ -1.14
TMEM53-206ENST00000420706 DPH3Q96FX2 82 aa7.92□□□□□ -1.14
TMEM53-206ENST00000420706 PLA2G2DQ9UNK4 145 aa7.92□□□□□ -1.14
TMEM53-206ENST00000420706 FAM168BA1KXE4 195 aa7.91□□□□□ -1.14
TMEM53-206ENST00000420706 TSTD3H0UI37 97 aa7.91□□□□□ -1.14
TMEM53-206ENST00000420706 KRTAP7-1Q8IUC3 87 aa7.91□□□□□ -1.14
TMEM53-206ENST00000420706 A0A087WYN8 130 aa7.9□□□□□ -1.14
TMEM53-206ENST00000420706 HNRNPA3P51991 378 aaKnown RBP7.9□□□□□ -1.14
TMEM53-206ENST00000420706 SERTAD4-AS1Q5TG53 156 aa7.9□□□□□ -1.14
TMEM53-206ENST00000420706 Q8NDZ9 215 aa7.9□□□□□ -1.14
TMEM53-206ENST00000420706 HIST1H4GQ99525 98 aa7.9□□□□□ -1.14
TMEM53-206ENST00000420706 PPDPFQ9H3Y8 114 aa7.9□□□□□ -1.14
TMEM53-206ENST00000420706 DYNC1H1Q14204 4646 aaKnown RBP7.9□□□□□ -1.15
TMEM53-206ENST00000420706 EPM2AB3EWF7 344 aa7.89□□□□□ -1.15
TMEM53-206ENST00000420706 TAL2Q16559 108 aa7.89□□□□□ -1.15
TMEM53-206ENST00000420706 COPS9Q8WXC6 57 aa7.89□□□□□ -1.15
TMEM53-206ENST00000420706 VPREB1P12018 145 aa7.88□□□□□ -1.15
TMEM53-206ENST00000420706 RPL24P83731 157 aaKnown RBP7.88□□□□□ -1.15
TMEM53-206ENST00000420706 FAM19A5Q7Z5A7 132 aaPredicted RBP7.88□□□□□ -1.15
TMEM53-206ENST00000420706 PLAC8Q9NZF1 115 aa7.88□□□□□ -1.15
TMEM53-206ENST00000420706 LRP1BQ9NZR2 4599 aa7.87□□□□□ -1.15
TMEM53-206ENST00000420706 IGLV5-37A0A075B6J1 123 aa7.87□□□□□ -1.15
TMEM53-206ENST00000420706 NDUFC2O95298 119 aa7.87□□□□□ -1.15
TMEM53-206ENST00000420706 PRR3P79522 188 aaKnown RBP7.87□□□□□ -1.15
TMEM53-206ENST00000420706 CIRBP-AS1Q8TBR5 109 aa7.87□□□□□ -1.15
TMEM53-206ENST00000420706 C22orf24Q9Y442 160 aa7.87□□□□□ -1.15
TMEM53-206ENST00000420706 XGP55808 180 aa7.86□□□□□ -1.15
TMEM53-206ENST00000420706 HSD52Q0P140 79 aa7.86□□□□□ -1.15
TMEM53-206ENST00000420706 SCXQ7RTU7 201 aa7.86□□□□□ -1.15
TMEM53-206ENST00000420706 CEND1Q8N111 149 aa7.86□□□□□ -1.15
TMEM53-206ENST00000420706 CTAG1AP78358 180 aa7.85□□□□□ -1.15
TMEM53-206ENST00000420706 A4D1N5 150 aa7.84□□□□□ -1.15
TMEM53-206ENST00000420706 M0R378 163 aa7.84□□□□□ -1.15
TMEM53-206ENST00000420706 HAMPP81172 84 aa7.84□□□□□ -1.15
TMEM53-206ENST00000420706 PHF5AQ7RTV0 110 aaKnown RBP7.84□□□□□ -1.15
TMEM53-206ENST00000420706 NKAPP1Q8N9T2 125 aa7.84□□□□□ -1.15
TMEM53-206ENST00000420706 IGKV2-28A0A075B6P5 120 aa7.83□□□□□ -1.16
TMEM53-206ENST00000420706 TRBV10-2A0A0K0K1G8 114 aa7.83□□□□□ -1.16
TMEM53-206ENST00000420706 M0QXV9 152 aa7.83□□□□□ -1.16
TMEM53-206ENST00000420706 NCR3O14931 201 aa7.83□□□□□ -1.16
TMEM53-206ENST00000420706 IGKV2D-28P01615 120 aa7.83□□□□□ -1.16
TMEM53-206ENST00000420706 DDTP30046 118 aa7.83□□□□□ -1.16
TMEM53-206ENST00000420706 C7orf33Q8WU49 177 aa7.83□□□□□ -1.16
TMEM53-206ENST00000420706 LINC00167Q96N53 147 aa7.83□□□□□ -1.16
TMEM53-206ENST00000420706 FXYD2P54710 66 aa7.82□□□□□ -1.16
TMEM53-206ENST00000420706 LBHQ53QV2 105 aaPredicted RBP7.82□□□□□ -1.16
TMEM53-206ENST00000420706 MRPL55Q7Z7F7 128 aaKnown RBP7.82□□□□□ -1.16
TMEM53-206ENST00000420706 PKHD1P08F94 4074 aa7.81□□□□□ -1.16
TMEM53-206ENST00000420706 GAGE10A6NGK3 116 aa7.8□□□□□ -1.16
TMEM53-206ENST00000420706 BVES-AS1Q5T3Y7 98 aa7.8□□□□□ -1.16
TMEM53-206ENST00000420706 LINC00337Q8N6G1 96 aa7.8□□□□□ -1.16
TMEM53-206ENST00000420706 CDK2AP2O75956 126 aa7.79□□□□□ -1.16
TMEM53-206ENST00000420706 CFC1BP0CG36 223 aa7.79□□□□□ -1.16
TMEM53-206ENST00000420706 CFC1P0CG37 223 aa7.79□□□□□ -1.16
TMEM53-206ENST00000420706 HINT1P49773 126 aaPredicted RBP7.79□□□□□ -1.16
TMEM53-206ENST00000420706 IGLV1-50A0A075B6I6 118 aa7.78□□□□□ -1.16
TMEM53-206ENST00000420706 TRBV10-3A0A0K0K1G6 114 aa7.78□□□□□ -1.16
TMEM53-206ENST00000420706 TMEM238LA0A1B0GVL6 79 aa7.78□□□□□ -1.16
TMEM53-206ENST00000420706 A6NJY4 79 aa7.78□□□□□ -1.16
TMEM53-206ENST00000420706 RPL37AP8A6NKH3 93 aa7.78□□□□□ -1.16
TMEM53-206ENST00000420706 IGLV6-57P01721 117 aa7.78□□□□□ -1.16
TMEM53-206ENST00000420706 S100A7L2Q5SY68 101 aa7.78□□□□□ -1.16
TMEM53-206ENST00000420706 KRTAP11-1Q8IUC1 163 aa7.78□□□□□ -1.16
TMEM53-206ENST00000420706 OR13C6PQ8NH95 151 aa7.78□□□□□ -1.16
TMEM53-206ENST00000420706 TRAV13-2A0A0B4J235 113 aa7.77□□□□□ -1.17
TMEM53-206ENST00000420706 PCP4L1A6NKN8 68 aa7.77□□□□□ -1.17
TMEM53-206ENST00000420706 M0R143 59 aa7.77□□□□□ -1.17
TMEM53-206ENST00000420706 UBE2BP63146 152 aa7.77□□□□□ -1.17
TMEM53-206ENST00000420706 TMEM126AQ9H061 195 aa7.77□□□□□ -1.17
TMEM53-206ENST00000420706 APOBP04114 4563 aaKnown RBP7.76□□□□□ -1.17
TMEM53-206ENST00000420706 A0A0B4J2C4 111 aa7.76□□□□□ -1.17
TMEM53-206ENST00000420706 A6NDN8 102 aa7.76□□□□□ -1.17
TMEM53-206ENST00000420706 A0A1B0GWB2 263 aa7.75□□□□□ -1.17
TMEM53-206ENST00000420706 SMR3BP02814 79 aaPredicted RBP7.75□□□□□ -1.17
TMEM53-206ENST00000420706 RAB37Q96AX2 223 aa7.75□□□□□ -1.17
TMEM53-206ENST00000420706 KCNQ1DNQ9H478 68 aa7.75□□□□□ -1.17
TMEM53-206ENST00000420706 NHP2Q9NX24 153 aaKnown RBP7.75□□□□□ -1.17
TMEM53-206ENST00000420706 KIAA1109Q2LD37 5005 aa7.75□□□□□ -1.17
TMEM53-206ENST00000420706 PRYO14603 147 aa7.73□□□□□ -1.17
TMEM53-206ENST00000420706 PRO1854Q9UHT4 67 aa7.73□□□□□ -1.17
TMEM53-206ENST00000420706 PSORS1C2Q9UIG4 136 aa7.73□□□□□ -1.17
TMEM53-206ENST00000420706 HERC2O95714 4834 aa7.73□□□□□ -1.17
TMEM53-206ENST00000420706 RYR1P21817 5038 aa7.72□□□□□ -1.17
TMEM53-206ENST00000420706 TRAV23DV6A0A075B6W5 121 aa7.72□□□□□ -1.17
TMEM53-206ENST00000420706 K7ERJ3 54 aa7.72□□□□□ -1.17
TMEM53-206ENST00000420706 RPL13AP40429 203 aaKnown RBP7.72□□□□□ -1.17
TMEM53-206ENST00000420706 BATFQ16520 125 aa7.72□□□□□ -1.17
TMEM53-206ENST00000420706 REG3GQ6UW15 175 aa7.72□□□□□ -1.17
TMEM53-206ENST00000420706 LINC00528Q8N1L1 170 aa7.72□□□□□ -1.17
TMEM53-206ENST00000420706 SPRR1AP35321 89 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms