RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 H0Y9J4 135 aa12.99□□□□□ -0.33
CPNE1-211ENST00000420363 IGKCP01834 107 aa12.98□□□□□ -0.33
CPNE1-211ENST00000420363 LINC00167Q96N53 147 aa12.98□□□□□ -0.33
CPNE1-211ENST00000420363 VPREB1P12018 145 aa12.97□□□□□ -0.33
CPNE1-211ENST00000420363 HERVK_113P61574 105 aa12.97□□□□□ -0.33
CPNE1-211ENST00000420363 NDUFA12Q9UI09 145 aa12.97□□□□□ -0.33
CPNE1-211ENST00000420363 LINC00587B1AMM8 73 aa12.96□□□□□ -0.33
CPNE1-211ENST00000420363 LEPROTO15243 131 aa12.96□□□□□ -0.33
CPNE1-211ENST00000420363 RPL24P83731 157 aaKnown RBP12.96□□□□□ -0.33
CPNE1-211ENST00000420363 COA6Q5JTJ3 125 aaKnown RBP12.96□□□□□ -0.33
CPNE1-211ENST00000420363 PLEKHB2Q96CS7 222 aa12.96□□□□□ -0.33
CPNE1-211ENST00000420363 MYMXA0A1B0GTQ4 84 aa12.95□□□□□ -0.34
CPNE1-211ENST00000420363 ZNF861PO60384 105 aa12.95□□□□□ -0.34
CPNE1-211ENST00000420363 LINC00158P58513 81 aa12.95□□□□□ -0.34
CPNE1-211ENST00000420363 BCE1O60756 84 aa12.94□□□□□ -0.34
CPNE1-211ENST00000420363 KRTAP10-8P60410 259 aa12.94□□□□□ -0.34
CPNE1-211ENST00000420363 PMCHL2Q9BQD1 86 aa12.94□□□□□ -0.34
CPNE1-211ENST00000420363 SYS1-DBNDD2H3BUS1 97 aa12.93□□□□□ -0.34
CPNE1-211ENST00000420363 TSPEAR-AS2P59090 65 aa12.93□□□□□ -0.34
CPNE1-211ENST00000420363 MEIG1Q5JSS6 88 aa12.93□□□□□ -0.34
CPNE1-211ENST00000420363 GAGE10A6NGK3 116 aa12.92□□□□□ -0.34
CPNE1-211ENST00000420363 RPL37AP8A6NKH3 93 aa12.92□□□□□ -0.34
CPNE1-211ENST00000420363 NMUP48645 174 aa12.92□□□□□ -0.34
CPNE1-211ENST00000420363 J3QQQ9 107 aa12.91□□□□□ -0.34
CPNE1-211ENST00000420363 SMIM13P0DJ93 91 aa12.91□□□□□ -0.34
CPNE1-211ENST00000420363 S100A1P23297 94 aa12.91□□□□□ -0.34
CPNE1-211ENST00000420363 LRP2P98164 4655 aa12.9□□□□□ -0.34
CPNE1-211ENST00000420363 Q8NDZ9 215 aa12.9□□□□□ -0.34
CPNE1-211ENST00000420363 A0A0U1RRA0 63 aa12.89□□□□□ -0.35
CPNE1-211ENST00000420363 ATP6V1G1O75348 118 aa12.89□□□□□ -0.35
CPNE1-211ENST00000420363 RPL28P46779 137 aaKnown RBP12.89□□□□□ -0.35
CPNE1-211ENST00000420363 LINC01545Q5VT33 79 aa12.89□□□□□ -0.35
CPNE1-211ENST00000420363 IGLV1-50A0A075B6I6 118 aa12.88□□□□□ -0.35
CPNE1-211ENST00000420363 KRTAP1-4P0C5Y4 121 aa12.88□□□□□ -0.35
CPNE1-211ENST00000420363 PET117Q6UWS5 81 aa12.88□□□□□ -0.35
CPNE1-211ENST00000420363 MIR7-3HGQ8N6C7 128 aa12.88□□□□□ -0.35
CPNE1-211ENST00000420363 IGKV2-28A0A075B6P5 120 aa12.87□□□□□ -0.35
CPNE1-211ENST00000420363 E9PLD3 99 aa12.87□□□□□ -0.35
CPNE1-211ENST00000420363 IGKV2D-28P01615 120 aa12.87□□□□□ -0.35
CPNE1-211ENST00000420363 LGALS3P17931 250 aaKnown RBP12.87□□□□□ -0.35
CPNE1-211ENST00000420363 KRTAP13-1Q8IUC0 172 aa12.85□□□□□ -0.35
CPNE1-211ENST00000420363 IGKV2D-26A0A0A0MRZ7 120 aa12.83□□□□□ -0.36
CPNE1-211ENST00000420363 LOC107984156A0A0G2JMH3 177 aa12.83□□□□□ -0.36
CPNE1-211ENST00000420363 C3orf79P0CE67 100 aa12.83□□□□□ -0.36
CPNE1-211ENST00000420363 ARL17AQ8IVW1 177 aa12.83□□□□□ -0.36
CPNE1-211ENST00000420363 BOD1L2Q8IYS8 172 aa12.83□□□□□ -0.36
CPNE1-211ENST00000420363 TMEM126AQ9H061 195 aa12.83□□□□□ -0.36
CPNE1-211ENST00000420363 RNF213Q63HN8 5207 aa12.83□□□□□ -0.36
CPNE1-211ENST00000420363 M0R378 163 aa12.82□□□□□ -0.36
CPNE1-211ENST00000420363 UBE2AP49459 152 aa12.81□□□□□ -0.36
CPNE1-211ENST00000420363 PRR26Q8N8Z3 221 aa12.8□□□□□ -0.36
CPNE1-211ENST00000420363 RPL13AP40429 203 aaKnown RBP12.79□□□□□ -0.36
CPNE1-211ENST00000420363 TMEM238C9JI98 176 aa12.78□□□□□ -0.36
CPNE1-211ENST00000420363 KRTDAPP60985 99 aa12.77□□□□□ -0.37
CPNE1-211ENST00000420363 A0A0J9YXY3 114 aa12.76□□□□□ -0.37
CPNE1-211ENST00000420363 C20orf202A1L168 122 aa12.76□□□□□ -0.37
CPNE1-211ENST00000420363 DAND5Q8N907 189 aa12.76□□□□□ -0.37
CPNE1-211ENST00000420363 PRYO14603 147 aa12.75□□□□□ -0.37
CPNE1-211ENST00000420363 NCR3O14931 201 aa12.75□□□□□ -0.37
CPNE1-211ENST00000420363 FAM19A1Q7Z5A9 133 aa12.75□□□□□ -0.37
CPNE1-211ENST00000420363 MIEN1Q9BRT3 115 aa12.75□□□□□ -0.37
CPNE1-211ENST00000420363 TRBV10-2A0A0K0K1G8 114 aa12.74□□□□□ -0.37
CPNE1-211ENST00000420363 AKR1D1P51857 326 aa12.74□□□□□ -0.37
CPNE1-211ENST00000420363 PRLHP81277 87 aa12.74□□□□□ -0.37
CPNE1-211ENST00000420363 KCNQ1DNQ9H478 68 aa12.73□□□□□ -0.37
CPNE1-211ENST00000420363 NDUFC2O95298 119 aa12.72□□□□□ -0.37
CPNE1-211ENST00000420363 SPANXB1Q9NS25 103 aaPredicted RBP12.72□□□□□ -0.37
CPNE1-211ENST00000420363 TIMM17BO60830 172 aa12.71□□□□□ -0.37
CPNE1-211ENST00000420363 SPRR1AP35321 89 aa12.7□□□□□ -0.38
CPNE1-211ENST00000420363 LINC00337Q8N6G1 96 aa12.7□□□□□ -0.38
CPNE1-211ENST00000420363 TRBV10-3A0A0K0K1G6 114 aa12.69□□□□□ -0.38
CPNE1-211ENST00000420363 S100A12P80511 92 aa12.69□□□□□ -0.38
CPNE1-211ENST00000420363 ZNF815PA8K554 130 aa12.68□□□□□ -0.38
CPNE1-211ENST00000420363 FAM229BQ4G0N7 80 aa12.68□□□□□ -0.38
CPNE1-211ENST00000420363 ADAMTSL4-AS1Q5T5F5 129 aa12.68□□□□□ -0.38
CPNE1-211ENST00000420363 HIST3H2BBQ8N257 126 aa12.68□□□□□ -0.38
CPNE1-211ENST00000420363 LITAFQ99732 161 aa12.68□□□□□ -0.38
CPNE1-211ENST00000420363 CRYGAP11844 174 aa12.67□□□□□ -0.38
CPNE1-211ENST00000420363 SOSTDC1Q6X4U4 206 aa12.67□□□□□ -0.38
CPNE1-211ENST00000420363 A0A087X002 238 aa12.66□□□□□ -0.38
CPNE1-211ENST00000420363 KRTAP4-16G5E9R7 235 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-211ENST00000420363 DDTP30046 118 aa12.66□□□□□ -0.38
CPNE1-211ENST00000420363 S100A2P29034 98 aa12.64□□□□□ -0.39
CPNE1-211ENST00000420363 HIST1H2BLQ99880 126 aa12.64□□□□□ -0.39
CPNE1-211ENST00000420363 ETDCA0A1B0GVM5 59 aa12.63□□□□□ -0.39
CPNE1-211ENST00000420363 IGLV6-57P01721 117 aa12.63□□□□□ -0.39
CPNE1-211ENST00000420363 HIGD2AQ9BW72 106 aa12.63□□□□□ -0.39
CPNE1-211ENST00000420363 EIF4EBP3O60516 100 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-211ENST00000420363 S100A6P06703 90 aa12.62□□□□□ -0.39
CPNE1-211ENST00000420363 NPC2P61916 151 aa12.62□□□□□ -0.39
CPNE1-211ENST00000420363 ANKRD39Q53RE8 183 aa12.62□□□□□ -0.39
CPNE1-211ENST00000420363 LINC00308Q8TCZ7 52 aa12.62□□□□□ -0.39
CPNE1-211ENST00000420363 TTTY13Q9BZ97 58 aa12.62□□□□□ -0.39
CPNE1-211ENST00000420363 SPANXCQ9NY87 97 aa12.62□□□□□ -0.39
CPNE1-211ENST00000420363 SNRPEP62304 92 aaKnown RBP12.61□□□□□ -0.39
CPNE1-211ENST00000420363 S100A7L2Q5SY68 101 aa12.6□□□□□ -0.39
CPNE1-211ENST00000420363 ATOH7Q8N100 152 aa12.6□□□□□ -0.39
CPNE1-211ENST00000420363 TYMSOSQ8TAI1 123 aa12.6□□□□□ -0.39
CPNE1-211ENST00000420363 ZNF706Q9Y5V0 76 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-211ENST00000420363 KRTAP13-2Q52LG2 175 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms