RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 C6orf48Q9UBA6 75 aa11.35□□□□□ -0.59
CRTC3-202ENST00000420329 LRCOL1A6NCL2 159 aa11.35□□□□□ -0.59
CRTC3-202ENST00000420329 WDFY4Q6ZS81 3184 aa11.34□□□□□ -0.59
CRTC3-202ENST00000420329 MGAQ8IWI9 3026 aa11.34□□□□□ -0.59
CRTC3-202ENST00000420329 PLAC8L1A1L4L8 177 aa11.34□□□□□ -0.59
CRTC3-202ENST00000420329 V9GYY9 64 aa11.34□□□□□ -0.59
CRTC3-202ENST00000420329 F8WDY8 70 aa11.32□□□□□ -0.6
CRTC3-202ENST00000420329 LINC00208Q96KT6 92 aa11.31□□□□□ -0.6
CRTC3-202ENST00000420329 VPS13AQ96RL7 3174 aa11.31□□□□□ -0.6
CRTC3-202ENST00000420329 C4orf48Q5BLP8 95 aa11.31□□□□□ -0.6
CRTC3-202ENST00000420329 MRPL55Q7Z7F7 128 aaKnown RBP11.31□□□□□ -0.6
CRTC3-202ENST00000420329 NHLRC4P0CG21 123 aaPredicted RBP11.31□□□□□ -0.6
CRTC3-202ENST00000420329 Q6ZQT0 140 aa11.3□□□□□ -0.6
CRTC3-202ENST00000420329 IGLV9-49A0A0B4J1Y8 123 aa11.3□□□□□ -0.6
CRTC3-202ENST00000420329 SPINK6Q6UWN8 80 aa11.29□□□□□ -0.6
CRTC3-202ENST00000420329 IL17DQ8TAD2 202 aa11.29□□□□□ -0.6
CRTC3-202ENST00000420329 A0A087WSZ3 146 aa11.28□□□□□ -0.6
CRTC3-202ENST00000420329 M0R2N4 97 aa11.28□□□□□ -0.6
CRTC3-202ENST00000420329 KIAA0087Q14695 138 aa11.27□□□□□ -0.61
CRTC3-202ENST00000420329 DEFB116Q30KQ4 102 aa11.27□□□□□ -0.61
CRTC3-202ENST00000420329 C7orf33Q8WU49 177 aa11.27□□□□□ -0.61
CRTC3-202ENST00000420329 CENPEQ02224 2701 aa11.25□□□□□ -0.61
CRTC3-202ENST00000420329 ELOF1P60002 83 aaKnown RBP11.25□□□□□ -0.61
CRTC3-202ENST00000420329 LOC110117498A0A087WWA1 95 aa11.25□□□□□ -0.61
CRTC3-202ENST00000420329 TRBV7-6A0A0J9YX20 115 aa11.25□□□□□ -0.61
CRTC3-202ENST00000420329 ESRGQ1W209 222 aa11.25□□□□□ -0.61
CRTC3-202ENST00000420329 RPS28P62857 69 aaKnown RBP11.24□□□□□ -0.61
CRTC3-202ENST00000420329 Q9BRP9 147 aa11.24□□□□□ -0.61
CRTC3-202ENST00000420329 BCE1O60756 84 aa11.23□□□□□ -0.61
CRTC3-202ENST00000420329 C22orf24Q9Y442 160 aa11.23□□□□□ -0.61
CRTC3-202ENST00000420329 ZNF706Q9Y5V0 76 aaPredicted RBP11.23□□□□□ -0.61
CRTC3-202ENST00000420329 SVIPQ8NHG7 77 aa11.23□□□□□ -0.61
CRTC3-202ENST00000420329 LINC00474Q9P2X8 69 aa11.23□□□□□ -0.61
CRTC3-202ENST00000420329 CSNK1G2-AS1Q8NCQ2 148 aa11.23□□□□□ -0.61
CRTC3-202ENST00000420329 LINC01556Q5JQF7 62 aa11.22□□□□□ -0.61
CRTC3-202ENST00000420329 PRLHP81277 87 aa11.22□□□□□ -0.61
CRTC3-202ENST00000420329 A6NED7 52 aa11.22□□□□□ -0.61
CRTC3-202ENST00000420329 CASC2Q6XLA1 102 aa11.22□□□□□ -0.61
CRTC3-202ENST00000420329 A0A096LNT2 108 aa11.21□□□□□ -0.61
CRTC3-202ENST00000420329 C1orf195Q5TG92 126 aa11.21□□□□□ -0.61
CRTC3-202ENST00000420329 SMIM29Q86T20 159 aa11.2□□□□□ -0.62
CRTC3-202ENST00000420329 HCG22E2RYF7 251 aa11.2□□□□□ -0.62
CRTC3-202ENST00000420329 Q8NAQ8 132 aa11.2□□□□□ -0.62
CRTC3-202ENST00000420329 GIG44P09565 113 aaPredicted RBP11.19□□□□□ -0.62
CRTC3-202ENST00000420329 DNAH14Q0VDD8 3507 aa11.18□□□□□ -0.62
CRTC3-202ENST00000420329 LINC00167Q96N53 147 aa11.18□□□□□ -0.62
CRTC3-202ENST00000420329 LAMA1P25391 3075 aa11.18□□□□□ -0.62
CRTC3-202ENST00000420329 IGLV6-57P01721 117 aa11.17□□□□□ -0.62
CRTC3-202ENST00000420329 C4orf26Q17RF5 130 aa11.16□□□□□ -0.62
CRTC3-202ENST00000420329 TM2D3Q9BRN9 247 aa11.16□□□□□ -0.62
CRTC3-202ENST00000420329 PSPHP1O15172 72 aa11.16□□□□□ -0.62
CRTC3-202ENST00000420329 VCANP13611 3396 aa11.15□□□□□ -0.62
CRTC3-202ENST00000420329 GVQW2A0A096LPI5 108 aaPredicted RBP11.15□□□□□ -0.63
CRTC3-202ENST00000420329 H0Y9P7 68 aa11.15□□□□□ -0.63
CRTC3-202ENST00000420329 H3BNG1 76 aa11.14□□□□□ -0.63
CRTC3-202ENST00000420329 ZNF292O60281 2723 aa11.14□□□□□ -0.63
CRTC3-202ENST00000420329 SEC61GP60059 68 aa11.13□□□□□ -0.63
CRTC3-202ENST00000420329 C19orf73Q9NVV2 129 aa11.13□□□□□ -0.63
CRTC3-202ENST00000420329 F8P00451 2351 aa11.13□□□□□ -0.63
CRTC3-202ENST00000420329 DSPP15924 2871 aaKnown RBP11.12□□□□□ -0.63
CRTC3-202ENST00000420329 SZT2Q5T011 3432 aa11.12□□□□□ -0.63
CRTC3-202ENST00000420329 VPREB1P12018 145 aa11.12□□□□□ -0.63
CRTC3-202ENST00000420329 PRR15LQ9BU68 103 aa11.12□□□□□ -0.63
CRTC3-202ENST00000420329 CELSR3Q9NYQ7 3312 aa11.12□□□□□ -0.63
CRTC3-202ENST00000420329 FLNAP21333 2647 aaKnown RBP11.12□□□□□ -0.63
CRTC3-202ENST00000420329 IGHV6-1A0A0B4J1U7 121 aa11.11□□□□□ -0.63
CRTC3-202ENST00000420329 C9orf129Q5T035 196 aaKnown RBP11.11□□□□□ -0.63
CRTC3-202ENST00000420329 PCOTHQ58A44 107 aa11.11□□□□□ -0.63
CRTC3-202ENST00000420329 Q6ZRX8 168 aa11.11□□□□□ -0.63
CRTC3-202ENST00000420329 HECTD1Q9ULT8 2610 aa11.1□□□□□ -0.63
CRTC3-202ENST00000420329 Q8NBF4 154 aa11.1□□□□□ -0.63
CRTC3-202ENST00000420329 Q6ZRP5 223 aa11.09□□□□□ -0.63
CRTC3-202ENST00000420329 USP24Q9UPU5 2620 aa11.08□□□□□ -0.64
CRTC3-202ENST00000420329 A0A1B0GW54 56 aa11.08□□□□□ -0.64
CRTC3-202ENST00000420329 FRYQ5TBA9 3013 aa11.08□□□□□ -0.64
CRTC3-202ENST00000420329 ST20-AS1Q8NBB2 130 aa11.07□□□□□ -0.64
CRTC3-202ENST00000420329 PRO0628Q9UI54 55 aa11.07□□□□□ -0.64
CRTC3-202ENST00000420329 FAM104AQ969W3 186 aa11.07□□□□□ -0.64
CRTC3-202ENST00000420329 hDV103S1A0JD37 113 aa11.06□□□□□ -0.64
CRTC3-202ENST00000420329 NBEAQ8NFP9 2946 aa11.06□□□□□ -0.64
CRTC3-202ENST00000420329 PMAIP1Q13794 54 aa11.05□□□□□ -0.64
CRTC3-202ENST00000420329 LINC00476Q8WZB0 136 aa11.04□□□□□ -0.64
CRTC3-202ENST00000420329 LINC01600Q96MT4 127 aa11.04□□□□□ -0.64
CRTC3-202ENST00000420329 NUPR2A6NF83 97 aa11.04□□□□□ -0.64
CRTC3-202ENST00000420329 FLNBO75369 2602 aaKnown RBP11.04□□□□□ -0.64
CRTC3-202ENST00000420329 LINC00612Q8N6U2 182 aa11.03□□□□□ -0.64
CRTC3-202ENST00000420329 CIRBP-AS1Q8TBR5 109 aa11.03□□□□□ -0.64
CRTC3-202ENST00000420329 MAP1AP78559 2803 aaPredicted RBP11.03□□□□□ -0.64
CRTC3-202ENST00000420329 C1orf64Q8NEQ6 169 aa11.03□□□□□ -0.64
CRTC3-202ENST00000420329 PRR34Q9NV39 138 aa11.03□□□□□ -0.64
CRTC3-202ENST00000420329 ITPR3Q14573 2671 aa11.02□□□□□ -0.65
CRTC3-202ENST00000420329 LINC00528Q8N1L1 170 aa11.02□□□□□ -0.65
CRTC3-202ENST00000420329 LY6G6CO95867 125 aa11.01□□□□□ -0.65
CRTC3-202ENST00000420329 SERTAD4-AS1Q5TG53 156 aa10.99□□□□□ -0.65
CRTC3-202ENST00000420329 AKAP13Q12802 2813 aa10.99□□□□□ -0.65
CRTC3-202ENST00000420329 LINC00588Q9Y4M8 146 aa10.99□□□□□ -0.65
CRTC3-202ENST00000420329 FAM168BA1KXE4 195 aa10.97□□□□□ -0.65
CRTC3-202ENST00000420329 KCNQ1DNQ9H478 68 aa10.96□□□□□ -0.66
CRTC3-202ENST00000420329 TRBV7-4A0A0J9YYF1 115 aa10.95□□□□□ -0.66
CRTC3-202ENST00000420329 IGLV5-52A0A0A0MRZ9 124 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms