RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ENHOQ6UWT2 76 aa9.78□□□□□ -0.84
HDAC9-208ENST00000417496 WFDC9Q8NEX5 89 aa9.78□□□□□ -0.84
HDAC9-208ENST00000417496 IGHV4-30-4P0DP06 118 aa9.78□□□□□ -0.84
HDAC9-208ENST00000417496 XAGE1AQ9HD64 81 aa9.78□□□□□ -0.84
HDAC9-208ENST00000417496 TMEM256-PLSCR3K7ERE1 68 aa9.77□□□□□ -0.85
HDAC9-208ENST00000417496 MIFP14174 115 aa9.77□□□□□ -0.85
HDAC9-208ENST00000417496 LELP1Q5T871 98 aa9.77□□□□□ -0.85
HDAC9-208ENST00000417496 UQCRQO14949 82 aa9.76□□□□□ -0.85
HDAC9-208ENST00000417496 HIST1H4AP62805 103 aaKnown RBP9.76□□□□□ -0.85
HDAC9-208ENST00000417496 Q6JHZ5 121 aa9.76□□□□□ -0.85
HDAC9-208ENST00000417496 LINC00575Q6W349 94 aa9.76□□□□□ -0.85
HDAC9-208ENST00000417496 C2orf48Q96LS8 159 aa9.76□□□□□ -0.85
HDAC9-208ENST00000417496 A0A1B0GX51 115 aa9.74□□□□□ -0.85
HDAC9-208ENST00000417496 JMJD7-PLA2G4BH0Y9G9 81 aa9.74□□□□□ -0.85
HDAC9-208ENST00000417496 PRR34Q9NV39 138 aa9.74□□□□□ -0.85
HDAC9-208ENST00000417496 COX7CP15954 63 aa9.74□□□□□ -0.85
HDAC9-208ENST00000417496 LYPD5Q6UWN5 251 aa9.74□□□□□ -0.85
HDAC9-208ENST00000417496 CYSTM1Q9H1C7 97 aa9.74□□□□□ -0.85
HDAC9-208ENST00000417496 RETNQ9HD89 108 aa9.73□□□□□ -0.85
HDAC9-208ENST00000417496 C6orf48Q9UBA6 75 aa9.73□□□□□ -0.85
HDAC9-208ENST00000417496 A0A0J9YWU9 116 aa9.73□□□□□ -0.85
HDAC9-208ENST00000417496 hADV29S1A0JD25 119 aa9.73□□□□□ -0.85
HDAC9-208ENST00000417496 HIGD2BQ4VC39 106 aa9.73□□□□□ -0.85
HDAC9-208ENST00000417496 ANK2Q01484 3957 aa9.72□□□□□ -0.85
HDAC9-208ENST00000417496 TENM3Q9P273 2699 aa9.72□□□□□ -0.85
HDAC9-208ENST00000417496 M0R2N4 97 aa9.72□□□□□ -0.85
HDAC9-208ENST00000417496 WFDC10BQ8IUB3 73 aa9.72□□□□□ -0.85
HDAC9-208ENST00000417496 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.85
HDAC9-208ENST00000417496 ATOX1O00244 68 aa9.71□□□□□ -0.85
HDAC9-208ENST00000417496 IGLV6-57P01721 117 aa9.71□□□□□ -0.86
HDAC9-208ENST00000417496 FAM19A1Q7Z5A9 133 aa9.71□□□□□ -0.86
HDAC9-208ENST00000417496 LAMTOR3Q9UHA4 124 aa9.71□□□□□ -0.86
HDAC9-208ENST00000417496 Q6ZQY7 126 aa9.7□□□□□ -0.86
HDAC9-208ENST00000417496 USP17L23D6RBM5 183 aa9.7□□□□□ -0.86
HDAC9-208ENST00000417496 OXLD1Q5BKU9 147 aa9.69□□□□□ -0.86
HDAC9-208ENST00000417496 RBM3P98179 157 aaKnown RBP9.68□□□□□ -0.86
HDAC9-208ENST00000417496 TRAV23DV6A0A075B6W5 121 aa9.66□□□□□ -0.86
HDAC9-208ENST00000417496 KPRPQ5T749 579 aaPredicted RBP9.66□□□□□ -0.86
HDAC9-208ENST00000417496 Q6ZQT0 140 aa9.66□□□□□ -0.86
HDAC9-208ENST00000417496 STAB1Q9NY15 2570 aa9.66□□□□□ -0.86
HDAC9-208ENST00000417496 Q6ZTC4 211 aa9.65□□□□□ -0.86
HDAC9-208ENST00000417496 ZNF561-AS1K7EIQ3 104 aa9.65□□□□□ -0.86
HDAC9-208ENST00000417496 CRYGAP11844 174 aa9.64□□□□□ -0.87
HDAC9-208ENST00000417496 CAMK2N2Q96S95 79 aa9.64□□□□□ -0.87
HDAC9-208ENST00000417496 UBL5Q9BZL1 73 aa9.64□□□□□ -0.87
HDAC9-208ENST00000417496 SERP2Q8N6R1 65 aa9.64□□□□□ -0.87
HDAC9-208ENST00000417496 GVQW2A0A096LPI5 108 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-208ENST00000417496 LOC107984640A0A0U1RRK4 108 aa9.63□□□□□ -0.87
HDAC9-208ENST00000417496 ZNF73O43830 326 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-208ENST00000417496 Q6ZRU5 148 aa9.63□□□□□ -0.87
HDAC9-208ENST00000417496 MAST4O15021 2626 aa9.63□□□□□ -0.87
HDAC9-208ENST00000417496 KRTAP10-11P60412 298 aa9.62□□□□□ -0.87
HDAC9-208ENST00000417496 DIRC1Q969H9 104 aa9.62□□□□□ -0.87
HDAC9-208ENST00000417496 NOTCH1P46531 2555 aa9.62□□□□□ -0.87
HDAC9-208ENST00000417496 FLNBO75369 2602 aaKnown RBP9.62□□□□□ -0.87
HDAC9-208ENST00000417496 FBN1P35555 2871 aaKnown RBP9.61□□□□□ -0.87
HDAC9-208ENST00000417496 ESRGQ1W209 222 aa9.61□□□□□ -0.87
HDAC9-208ENST00000417496 KRTAP26-1Q6PEX3 210 aa9.61□□□□□ -0.87
HDAC9-208ENST00000417496 DSCR8Q96T75 97 aa9.61□□□□□ -0.87
HDAC9-208ENST00000417496 HAMPP81172 84 aa9.6□□□□□ -0.87
HDAC9-208ENST00000417496 MUC7Q8TAX7 377 aa9.6□□□□□ -0.87
HDAC9-208ENST00000417496 UPK3BQ9BT76 320 aa9.6□□□□□ -0.87
HDAC9-208ENST00000417496 GHRHP01286 108 aa9.59□□□□□ -0.87
HDAC9-208ENST00000417496 VPREB1P12018 145 aa9.59□□□□□ -0.87
HDAC9-208ENST00000417496 C15orf56Q8N910 161 aa9.59□□□□□ -0.87
HDAC9-208ENST00000417496 F8P00451 2351 aa9.59□□□□□ -0.87
HDAC9-208ENST00000417496 LOC110117498A0A087WWA1 95 aa9.59□□□□□ -0.87
HDAC9-208ENST00000417496 COX7BP24311 80 aa9.58□□□□□ -0.88
HDAC9-208ENST00000417496 WIPF1O43516 503 aa9.57□□□□□ -0.88
HDAC9-208ENST00000417496 LINC01547P58512 204 aaPredicted RBP9.57□□□□□ -0.88
HDAC9-208ENST00000417496 ATP5EP2Q5VTU8 51 aa9.57□□□□□ -0.88
HDAC9-208ENST00000417496 Q6ZVQ6 151 aa9.57□□□□□ -0.88
HDAC9-208ENST00000417496 Q6ZRP5 223 aa9.57□□□□□ -0.88
HDAC9-208ENST00000417496 ELOF1P60002 83 aaKnown RBP9.56□□□□□ -0.88
HDAC9-208ENST00000417496 IGKV2D-24A0A075B6R9 120 aa9.56□□□□□ -0.88
HDAC9-208ENST00000417496 EGFEM1PQ0D2K5 195 aa9.55□□□□□ -0.88
HDAC9-208ENST00000417496 SCXQ7RTU7 201 aa9.55□□□□□ -0.88
HDAC9-208ENST00000417496 NDUFC2-KCTD14E9PQ53 114 aa9.54□□□□□ -0.88
HDAC9-208ENST00000417496 C1orf43Q9BWL3 253 aa9.54□□□□□ -0.88
HDAC9-208ENST00000417496 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-208ENST00000417496 M0R378 163 aa9.53□□□□□ -0.88
HDAC9-208ENST00000417496 TRAV10A0A0B4J240 114 aa9.51□□□□□ -0.89
HDAC9-208ENST00000417496 TRBV7-4A0A0J9YYF1 115 aa9.51□□□□□ -0.89
HDAC9-208ENST00000417496 H3BNG1 76 aa9.51□□□□□ -0.89
HDAC9-208ENST00000417496 DEFB131BA0A096LNP1 70 aa9.51□□□□□ -0.89
HDAC9-208ENST00000417496 C20orf197Q8N268 126 aa9.51□□□□□ -0.89
HDAC9-208ENST00000417496 LINC00528Q8N1L1 170 aa9.5□□□□□ -0.89
HDAC9-208ENST00000417496 SERTAD4-AS1Q5TG53 156 aa9.49□□□□□ -0.89
HDAC9-208ENST00000417496 BAHCC1Q9P281 2608 aa9.49□□□□□ -0.89
HDAC9-208ENST00000417496 DEFB105AQ8NG35 78 aa9.49□□□□□ -0.89
HDAC9-208ENST00000417496 SYCNQ0VAF6 134 aa9.48□□□□□ -0.89
HDAC9-208ENST00000417496 J3KT08 172 aa9.48□□□□□ -0.89
HDAC9-208ENST00000417496 PDE6GP18545 87 aa9.48□□□□□ -0.89
HDAC9-208ENST00000417496 C11orf45Q8TAV5 145 aa9.48□□□□□ -0.89
HDAC9-208ENST00000417496 NBEAL1Q6ZS30 2694 aa9.47□□□□□ -0.89
HDAC9-208ENST00000417496 DPH3Q96FX2 82 aa9.47□□□□□ -0.89
HDAC9-208ENST00000417496 TMEM258P61165 79 aa9.47□□□□□ -0.89
HDAC9-208ENST00000417496 LINC01556Q5JQF7 62 aa9.47□□□□□ -0.89
HDAC9-208ENST00000417496 TRBV7-6A0A0J9YX20 115 aa9.46□□□□□ -0.9
HDAC9-208ENST00000417496 PRB2P02812 416 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms