RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 TMEM170BQ5T4T1 132 aa12.67□□□□□ -0.38
ACTB-203ENST00000417101 A0A0U1RQV1 116 aa12.64□□□□□ -0.39
ACTB-203ENST00000417101 SFTA2Q6UW10 78 aa12.64□□□□□ -0.39
ACTB-203ENST00000417101 PLEKHB2Q96CS7 222 aa12.63□□□□□ -0.39
ACTB-203ENST00000417101 CBLN2Q8IUK8 224 aa12.62□□□□□ -0.39
ACTB-203ENST00000417101 LINC00158P58513 81 aa12.61□□□□□ -0.39
ACTB-203ENST00000417101 HIGD2AQ9BW72 106 aa12.61□□□□□ -0.39
ACTB-203ENST00000417101 CHTOPQ9Y3Y2 248 aaKnown RBP12.61□□□□□ -0.39
ACTB-203ENST00000417101 A0A0U1RRA0 63 aa12.59□□□□□ -0.39
ACTB-203ENST00000417101 C3orf22Q8N5N4 141 aa12.59□□□□□ -0.39
ACTB-203ENST00000417101 FAT4Q6V0I7 4981 aa12.57□□□□□ -0.4
ACTB-203ENST00000417101 IGLV7-46A0A075B6I9 117 aa12.56□□□□□ -0.4
ACTB-203ENST00000417101 MUC17Q685J3 4493 aa12.56□□□□□ -0.4
ACTB-203ENST00000417101 TMEM223A0PJW6 202 aa12.55□□□□□ -0.4
ACTB-203ENST00000417101 APOC3P02656 99 aa12.55□□□□□ -0.4
ACTB-203ENST00000417101 CDIP1Q9H305 208 aa12.55□□□□□ -0.4
ACTB-203ENST00000417101 CTAG1AP78358 180 aa12.54□□□□□ -0.4
ACTB-203ENST00000417101 TPRXLQ17RH7 258 aa12.54□□□□□ -0.4
ACTB-203ENST00000417101 SPRR4Q96PI1 79 aa12.53□□□□□ -0.4
ACTB-203ENST00000417101 TRAV12-1A0A0B4J245 112 aa12.52□□□□□ -0.41
ACTB-203ENST00000417101 ATP6V1G1O75348 118 aa12.52□□□□□ -0.41
ACTB-203ENST00000417101 SMIM13P0DJ93 91 aa12.52□□□□□ -0.41
ACTB-203ENST00000417101 IFI27L1Q96BM0 104 aa12.52□□□□□ -0.41
ACTB-203ENST00000417101 BOD1L2Q8IYS8 172 aa12.51□□□□□ -0.41
ACTB-203ENST00000417101 SNAPINO95295 136 aa12.5□□□□□ -0.41
ACTB-203ENST00000417101 MEIG1Q5JSS6 88 aa12.5□□□□□ -0.41
ACTB-203ENST00000417101 CHCHD1Q96BP2 118 aaKnown RBP12.5□□□□□ -0.41
ACTB-203ENST00000417101 SVBPQ8N300 66 aa12.49□□□□□ -0.41
ACTB-203ENST00000417101 PRYO14603 147 aa12.48□□□□□ -0.41
ACTB-203ENST00000417101 NCR3O14931 201 aa12.48□□□□□ -0.41
ACTB-203ENST00000417101 NDUFA5Q16718 116 aa12.48□□□□□ -0.41
ACTB-203ENST00000417101 SPAG11AQ6PDA7 123 aa12.48□□□□□ -0.41
ACTB-203ENST00000417101 MIR7-3HGQ8N6C7 128 aa12.48□□□□□ -0.41
ACTB-203ENST00000417101 ZNF706Q9Y5V0 76 aaPredicted RBP12.48□□□□□ -0.41
ACTB-203ENST00000417101 PPDPFQ9H3Y8 114 aa12.47□□□□□ -0.41
ACTB-203ENST00000417101 HERV-K104P63124 156 aa12.46□□□□□ -0.41
ACTB-203ENST00000417101 LINC00337Q8N6G1 96 aa12.45□□□□□ -0.42
ACTB-203ENST00000417101 YPEL4Q96NS1 127 aa12.45□□□□□ -0.42
ACTB-203ENST00000417101 SPRR1AP35321 89 aa12.44□□□□□ -0.42
ACTB-203ENST00000417101 C4orf48Q5BLP8 95 aa12.44□□□□□ -0.42
ACTB-203ENST00000417101 KCNQ1DNQ9H478 68 aa12.44□□□□□ -0.42
ACTB-203ENST00000417101 NDUFA12Q9UI09 145 aa12.44□□□□□ -0.42
ACTB-203ENST00000417101 ETDCA0A1B0GVM5 59 aa12.43□□□□□ -0.42
ACTB-203ENST00000417101 LCE2AQ5TA79 106 aaPredicted RBP12.43□□□□□ -0.42
ACTB-203ENST00000417101 FAM19A2Q8N3H0 131 aa12.43□□□□□ -0.42
ACTB-203ENST00000417101 DAND5Q8N907 189 aa12.43□□□□□ -0.42
ACTB-203ENST00000417101 SMCR5Q8TEV8 140 aa12.43□□□□□ -0.42
ACTB-203ENST00000417101 TRBV10-3A0A0K0K1G6 114 aa12.41□□□□□ -0.42
ACTB-203ENST00000417101 LINC00587B1AMM8 73 aa12.41□□□□□ -0.42
ACTB-203ENST00000417101 KRTAP4-16G5E9R7 235 aaPredicted RBP12.41□□□□□ -0.42
ACTB-203ENST00000417101 HSBP1O75506 76 aa12.41□□□□□ -0.42
ACTB-203ENST00000417101 Q8NBF4 154 aa12.41□□□□□ -0.42
ACTB-203ENST00000417101 MYMXA0A1B0GTQ4 84 aa12.4□□□□□ -0.42
ACTB-203ENST00000417101 H0Y8G0 127 aa12.4□□□□□ -0.42
ACTB-203ENST00000417101 MAP1LC3CQ9BXW4 147 aa12.39□□□□□ -0.43
ACTB-203ENST00000417101 FP248Q71RG6 208 aaPredicted RBP12.38□□□□□ -0.43
ACTB-203ENST00000417101 KRTAP9-2Q9BYQ4 174 aa12.38□□□□□ -0.43
ACTB-203ENST00000417101 TSPEAR-AS2P59090 65 aa12.37□□□□□ -0.43
ACTB-203ENST00000417101 S100A12P80511 92 aa12.36□□□□□ -0.43
ACTB-203ENST00000417101 LINC00483Q53H64 154 aa12.35□□□□□ -0.43
ACTB-203ENST00000417101 B5MCH6 92 aa12.34□□□□□ -0.43
ACTB-203ENST00000417101 GAGE2AQ6NT46 116 aa12.34□□□□□ -0.43
ACTB-203ENST00000417101 LEPROTO15243 131 aa12.33□□□□□ -0.44
ACTB-203ENST00000417101 LEPROTL1O95214 131 aa12.33□□□□□ -0.44
ACTB-203ENST00000417101 SPINK1P00995 79 aa12.33□□□□□ -0.44
ACTB-203ENST00000417101 ERC2-IT1O76042 136 aa12.32□□□□□ -0.44
ACTB-203ENST00000417101 DDTP30046 118 aa12.32□□□□□ -0.44
ACTB-203ENST00000417101 LOC107984156A0A0G2JMH3 177 aa12.31□□□□□ -0.44
ACTB-203ENST00000417101 KRTAP13-3Q3SY46 172 aa12.31□□□□□ -0.44
ACTB-203ENST00000417101 ARL17AQ8IVW1 177 aa12.31□□□□□ -0.44
ACTB-203ENST00000417101 TRBV10-2A0A0K0K1G8 114 aa12.3□□□□□ -0.44
ACTB-203ENST00000417101 TRGC2P03986 189 aa12.3□□□□□ -0.44
ACTB-203ENST00000417101 IGLV9-49A0A0B4J1Y8 123 aa12.29□□□□□ -0.44
ACTB-203ENST00000417101 J3QQQ9 107 aa12.29□□□□□ -0.44
ACTB-203ENST00000417101 SERF1AO75920 110 aa12.29□□□□□ -0.44
ACTB-203ENST00000417101 PLNP26678 52 aa12.29□□□□□ -0.44
ACTB-203ENST00000417101 LINC00310P59036 64 aa12.29□□□□□ -0.44
ACTB-203ENST00000417101 MOBPQ13875 183 aa12.29□□□□□ -0.44
ACTB-203ENST00000417101 Q9BRP9 147 aa12.28□□□□□ -0.44
ACTB-203ENST00000417101 DPM2O94777 84 aa12.27□□□□□ -0.45
ACTB-203ENST00000417101 PMCHL2Q9BQD1 86 aa12.27□□□□□ -0.45
ACTB-203ENST00000417101 MIEN1Q9BRT3 115 aa12.27□□□□□ -0.45
ACTB-203ENST00000417101 SPANXB1Q9NS25 103 aaPredicted RBP12.27□□□□□ -0.45
ACTB-203ENST00000417101 HERVK_113P61574 105 aa12.26□□□□□ -0.45
ACTB-203ENST00000417101 Q6ZRX8 168 aa12.26□□□□□ -0.45
ACTB-203ENST00000417101 FABP4P15090 132 aa12.25□□□□□ -0.45
ACTB-203ENST00000417101 HSPB8Q9UJY1 196 aa12.25□□□□□ -0.45
ACTB-203ENST00000417101 LGALS3P17931 250 aaKnown RBP12.24□□□□□ -0.45
ACTB-203ENST00000417101 NMUP48645 174 aa12.24□□□□□ -0.45
ACTB-203ENST00000417101 S100A7L2Q5SY68 101 aa12.24□□□□□ -0.45
ACTB-203ENST00000417101 SSBP3-AS1Q7Z2R9 100 aa12.24□□□□□ -0.45
ACTB-203ENST00000417101 IGLV6-57P01721 117 aa12.23□□□□□ -0.45
ACTB-203ENST00000417101 ASB16-AS1Q495Z4 193 aa12.23□□□□□ -0.45
ACTB-203ENST00000417101 NDUFC2O95298 119 aa12.22□□□□□ -0.45
ACTB-203ENST00000417101 IGKCP01834 107 aa12.22□□□□□ -0.45
ACTB-203ENST00000417101 Q8N377 158 aa12.22□□□□□ -0.45
ACTB-203ENST00000417101 RPS29P62273 56 aaKnown RBP12.21□□□□□ -0.45
ACTB-203ENST00000417101 TRAV23DV6A0A075B6W5 121 aa12.19□□□□□ -0.46
ACTB-203ENST00000417101 NPC2P61916 151 aa12.19□□□□□ -0.46
ACTB-203ENST00000417101 SOSTDC1Q6X4U4 206 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms