RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 IGLC3P0DOY3 106 aa8.41□□□□□ -1.06
PAF1-202ENST00000416728 PRLHP81277 87 aa8.41□□□□□ -1.06
PAF1-202ENST00000416728 RETNLBQ9BQ08 111 aa8.41□□□□□ -1.06
PAF1-202ENST00000416728 A0A1B0GV90 55 aa8.4□□□□□ -1.06
PAF1-202ENST00000416728 VPREB1P12018 145 aa8.4□□□□□ -1.06
PAF1-202ENST00000416728 NDUFA6P56556 154 aa8.4□□□□□ -1.06
PAF1-202ENST00000416728 FAM19A1Q7Z5A9 133 aa8.4□□□□□ -1.06
PAF1-202ENST00000416728 TMEM126AQ9H061 195 aa8.4□□□□□ -1.06
PAF1-202ENST00000416728 SND1-IT1Q9HBX3 110 aa8.4□□□□□ -1.06
PAF1-202ENST00000416728 TSTD3H0UI37 97 aa8.39□□□□□ -1.07
PAF1-202ENST00000416728 S100A2P29034 98 aa8.39□□□□□ -1.07
PAF1-202ENST00000416728 RPL24P83731 157 aaKnown RBP8.39□□□□□ -1.07
PAF1-202ENST00000416728 ERG28Q9UKR5 140 aa8.39□□□□□ -1.07
PAF1-202ENST00000416728 TMEM238C9JI98 176 aa8.38□□□□□ -1.07
PAF1-202ENST00000416728 ZNF22P17026 224 aaPredicted RBP8.38□□□□□ -1.07
PAF1-202ENST00000416728 DDTP30046 118 aa8.37□□□□□ -1.07
PAF1-202ENST00000416728 COX17Q14061 63 aa8.37□□□□□ -1.07
PAF1-202ENST00000416728 RHEBQ15382 184 aa8.37□□□□□ -1.07
PAF1-202ENST00000416728 ZNF625Q96I27 306 aaPredicted RBP8.37□□□□□ -1.07
PAF1-202ENST00000416728 A0A096LNJ9 63 aa8.36□□□□□ -1.07
PAF1-202ENST00000416728 PYY3Q5JQD4 70 aa8.36□□□□□ -1.07
PAF1-202ENST00000416728 M0R378 163 aa8.35□□□□□ -1.07
PAF1-202ENST00000416728 SFTA2Q6UW10 78 aa8.35□□□□□ -1.07
PAF1-202ENST00000416728 CDIP1Q9H305 208 aa8.35□□□□□ -1.07
PAF1-202ENST00000416728 HBDP02042 147 aa8.35□□□□□ -1.07
PAF1-202ENST00000416728 TPRXLQ17RH7 258 aa8.35□□□□□ -1.07
PAF1-202ENST00000416728 PLEKHB2Q96CS7 222 aa8.35□□□□□ -1.07
PAF1-202ENST00000416728 IGLV7-46A0A075B6I9 117 aa8.34□□□□□ -1.07
PAF1-202ENST00000416728 LINC00614P0C842 121 aa8.34□□□□□ -1.07
PAF1-202ENST00000416728 TMEM170BQ5T4T1 132 aa8.34□□□□□ -1.07
PAF1-202ENST00000416728 Q8NDZ9 215 aa8.34□□□□□ -1.07
PAF1-202ENST00000416728 C11orf86A6NJI1 115 aa8.33□□□□□ -1.08
PAF1-202ENST00000416728 PMCHL1Q16048 86 aa8.33□□□□□ -1.08
PAF1-202ENST00000416728 BAGE3Q86Y29 109 aa8.33□□□□□ -1.08
PAF1-202ENST00000416728 C18orf32Q8TCD1 76 aa8.33□□□□□ -1.08
PAF1-202ENST00000416728 URB1-AS1Q96HZ7 61 aa8.33□□□□□ -1.08
PAF1-202ENST00000416728 HIGD2AQ9BW72 106 aa8.33□□□□□ -1.08
PAF1-202ENST00000416728 RPS10P5Q9NQ39 176 aa8.33□□□□□ -1.08
PAF1-202ENST00000416728 C3orf22Q8N5N4 141 aa8.32□□□□□ -1.08
PAF1-202ENST00000416728 LINC00158P58513 81 aa8.31□□□□□ -1.08
PAF1-202ENST00000416728 YPEL4Q96NS1 127 aa8.31□□□□□ -1.08
PAF1-202ENST00000416728 TRAPPC1Q9Y5R8 145 aa8.31□□□□□ -1.08
PAF1-202ENST00000416728 LCE2AQ5TA79 106 aaPredicted RBP8.3□□□□□ -1.08
PAF1-202ENST00000416728 KRTAP9-2Q9BYQ4 174 aa8.3□□□□□ -1.08
PAF1-202ENST00000416728 PCP4P48539 62 aa8.29□□□□□ -1.08
PAF1-202ENST00000416728 SPAG11AQ6PDA7 123 aa8.29□□□□□ -1.08
PAF1-202ENST00000416728 A0A0U1RRA0 63 aa8.28□□□□□ -1.08
PAF1-202ENST00000416728 HIST3H2BBQ8N257 126 aa8.28□□□□□ -1.08
PAF1-202ENST00000416728 SPRR4Q96PI1 79 aa8.28□□□□□ -1.08
PAF1-202ENST00000416728 PPDPFQ9H3Y8 114 aa8.28□□□□□ -1.08
PAF1-202ENST00000416728 CHTOPQ9Y3Y2 248 aaKnown RBP8.28□□□□□ -1.08
PAF1-202ENST00000416728 FAT4Q6V0I7 4981 aa8.27□□□□□ -1.08
PAF1-202ENST00000416728 ZNF706Q9Y5V0 76 aaPredicted RBP8.27□□□□□ -1.09
PAF1-202ENST00000416728 JOSD1Q15040 202 aaPredicted RBP8.25□□□□□ -1.09
PAF1-202ENST00000416728 C4orf48Q5BLP8 95 aa8.25□□□□□ -1.09
PAF1-202ENST00000416728 TMEM223A0PJW6 202 aa8.24□□□□□ -1.09
PAF1-202ENST00000416728 PRYO14603 147 aa8.24□□□□□ -1.09
PAF1-202ENST00000416728 BOD1L2Q8IYS8 172 aa8.24□□□□□ -1.09
PAF1-202ENST00000416728 DLEU1O43261 78 aa8.23□□□□□ -1.09
PAF1-202ENST00000416728 SMIM13P0DJ93 91 aa8.23□□□□□ -1.09
PAF1-202ENST00000416728 MEIG1Q5JSS6 88 aa8.23□□□□□ -1.09
PAF1-202ENST00000416728 FP248Q71RG6 208 aaPredicted RBP8.23□□□□□ -1.09
PAF1-202ENST00000416728 TRAV12-1A0A0B4J245 112 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 M0R143 59 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 NCR3O14931 201 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 HIST1H2BKO60814 126 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 HIST1H2BJP06899 126 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 HIST1H2BOP23527 126 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 HIST1H2BBP33778 126 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 HIST1H2BDP58876 126 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 HIST1H2BCP62807 126 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 HIST2H2BEQ16778 126 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.22□□□□□ -1.09
PAF1-202ENST00000416728 MIR7-3HGQ8N6C7 128 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 LINC00337Q8N6G1 96 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 Q8NBF4 154 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 HIST1H2BHQ93079 126 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 IFI27L1Q96BM0 104 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 HIST1H2BNQ99877 126 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 HIST1H2BMQ99879 126 aa8.22□□□□□ -1.09
PAF1-202ENST00000416728 MUC17Q685J3 4493 aa8.21□□□□□ -1.09
PAF1-202ENST00000416728 ETDCA0A1B0GVM5 59 aa8.21□□□□□ -1.1
PAF1-202ENST00000416728 SPRR1AP35321 89 aa8.21□□□□□ -1.1
PAF1-202ENST00000416728 HERV-K104P63124 156 aa8.21□□□□□ -1.1
PAF1-202ENST00000416728 C21orf62-AS1Q17RA5 79 aa8.21□□□□□ -1.1
PAF1-202ENST00000416728 COA6Q5JTJ3 125 aaKnown RBP8.21□□□□□ -1.1
PAF1-202ENST00000416728 DAND5Q8N907 189 aa8.21□□□□□ -1.1
PAF1-202ENST00000416728 KCNQ1DNQ9H478 68 aa8.21□□□□□ -1.1
PAF1-202ENST00000416728 SVIPQ8NHG7 77 aa8.2□□□□□ -1.1
PAF1-202ENST00000416728 SMCR5Q8TEV8 140 aa8.2□□□□□ -1.1
PAF1-202ENST00000416728 CHCHD1Q96BP2 118 aaKnown RBP8.2□□□□□ -1.1
PAF1-202ENST00000416728 PRO1933Q9H354 126 aa8.2□□□□□ -1.1
PAF1-202ENST00000416728 HIST1H2BLQ99880 126 aa8.19□□□□□ -1.1
PAF1-202ENST00000416728 TRBV10-3A0A0K0K1G6 114 aa8.18□□□□□ -1.1
PAF1-202ENST00000416728 KRTAP4-16G5E9R7 235 aaPredicted RBP8.18□□□□□ -1.1
PAF1-202ENST00000416728 SPINK1P00995 79 aa8.18□□□□□ -1.1
PAF1-202ENST00000416728 NDUFA12Q9UI09 145 aa8.18□□□□□ -1.1
PAF1-202ENST00000416728 FABP4P15090 132 aa8.17□□□□□ -1.1
PAF1-202ENST00000416728 KRTAP13-3Q3SY46 172 aa8.17□□□□□ -1.1
PAF1-202ENST00000416728 SNHG12Q9BXW3 62 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms