RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 HSD52Q0P140 79 aa5.56□□□□□ -1.52
LINC01238-201ENST00000416204 BVES-AS1Q5T3Y7 98 aa5.56□□□□□ -1.52
LINC01238-201ENST00000416204 C5orf38Q86SI9 138 aa5.56□□□□□ -1.52
LINC01238-201ENST00000416204 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
LINC01238-201ENST00000416204 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
LINC01238-201ENST00000416204 PYGO1Q9Y3Y4 419 aa5.56□□□□□ -1.52
LINC01238-201ENST00000416204 H7C423 109 aa5.55□□□□□ -1.52
LINC01238-201ENST00000416204 ZNF25P17030 456 aaPredicted RBP5.55□□□□□ -1.52
LINC01238-201ENST00000416204 HERVK_113P61574 105 aa5.55□□□□□ -1.52
LINC01238-201ENST00000416204 TAL2Q16559 108 aa5.55□□□□□ -1.52
LINC01238-201ENST00000416204 ORAOV1Q8WV07 137 aa5.55□□□□□ -1.52
LINC01238-201ENST00000416204 CST9LQ9H4G1 147 aa5.55□□□□□ -1.52
LINC01238-201ENST00000416204 CDC42SE2Q9NRR3 84 aa5.55□□□□□ -1.52
LINC01238-201ENST00000416204 TRAV13-1A0A0B4J241 112 aa5.54□□□□□ -1.52
LINC01238-201ENST00000416204 A6NDN8 102 aa5.54□□□□□ -1.52
LINC01238-201ENST00000416204 E9PLD3 99 aa5.54□□□□□ -1.52
LINC01238-201ENST00000416204 UBE2BP63146 152 aa5.54□□□□□ -1.52
LINC01238-201ENST00000416204 SPAG11BQ08648 103 aa5.54□□□□□ -1.52
LINC01238-201ENST00000416204 GAGE2EQ4V326 116 aa5.54□□□□□ -1.52
LINC01238-201ENST00000416204 GAGE2DQ9UEU5 116 aa5.54□□□□□ -1.52
LINC01238-201ENST00000416204 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
LINC01238-201ENST00000416204 IGKV2D-26A0A0A0MRZ7 120 aa5.53□□□□□ -1.52
LINC01238-201ENST00000416204 C11orf86A6NJI1 115 aa5.53□□□□□ -1.52
LINC01238-201ENST00000416204 RPL13AP40429 203 aaKnown RBP5.53□□□□□ -1.52
LINC01238-201ENST00000416204 RPL39P62891 51 aaKnown RBP5.53□□□□□ -1.52
LINC01238-201ENST00000416204 SMAGPQ0VAQ4 97 aa5.53□□□□□ -1.52
LINC01238-201ENST00000416204 C21orf62-AS1Q17RA5 79 aa5.53□□□□□ -1.52
LINC01238-201ENST00000416204 C10orf25Q5T742 122 aa5.53□□□□□ -1.52
LINC01238-201ENST00000416204 KRTAP7-1Q8IUC3 87 aa5.53□□□□□ -1.52
LINC01238-201ENST00000416204 PCP2Q8IVA1 136 aa5.53□□□□□ -1.52
LINC01238-201ENST00000416204 LINC00469Q8N7U9 141 aa5.53□□□□□ -1.52
LINC01238-201ENST00000416204 SPANXA1Q9NS26 97 aa5.53□□□□□ -1.52
LINC01238-201ENST00000416204 MYMXA0A1B0GTQ4 84 aa5.52□□□□□ -1.53
LINC01238-201ENST00000416204 M0QXV9 152 aa5.52□□□□□ -1.53
LINC01238-201ENST00000416204 C2orf48Q96LS8 159 aa5.52□□□□□ -1.53
LINC01238-201ENST00000416204 TIMM21Q9BVV7 248 aa5.52□□□□□ -1.53
LINC01238-201ENST00000416204 VCX2Q9H322 139 aa5.52□□□□□ -1.53
LINC01238-201ENST00000416204 IGLV4-3A0A075B6K6 122 aa5.51□□□□□ -1.53
LINC01238-201ENST00000416204 A0A087X002 238 aa5.51□□□□□ -1.53
LINC01238-201ENST00000416204 TMEM238LA0A1B0GVL6 79 aa5.51□□□□□ -1.53
LINC01238-201ENST00000416204 H3BRM9 83 aa5.51□□□□□ -1.53
LINC01238-201ENST00000416204 TAX1BP3O14907 124 aa5.51□□□□□ -1.53
LINC01238-201ENST00000416204 AMELXQ99217 191 aa5.51□□□□□ -1.53
LINC01238-201ENST00000416204 TP73-AS1Q9UF72 201 aa5.51□□□□□ -1.53
LINC01238-201ENST00000416204 MRPS36P82909 103 aaKnown RBP5.5□□□□□ -1.53
LINC01238-201ENST00000416204 UNQ6190/PRO20217Q6UXQ8 127 aa5.5□□□□□ -1.53
LINC01238-201ENST00000416204 Q6ZUT4 128 aa5.5□□□□□ -1.53
LINC01238-201ENST00000416204 CDIP1Q9H305 208 aa5.5□□□□□ -1.53
LINC01238-201ENST00000416204 ANAPC11Q9NYG5 84 aa5.5□□□□□ -1.53
LINC01238-201ENST00000416204 CEND1Q8N111 149 aa5.49□□□□□ -1.53
LINC01238-201ENST00000416204 C6orf48Q9UBA6 75 aa5.49□□□□□ -1.53
LINC01238-201ENST00000416204 UBE2D4Q9Y2X8 147 aa5.49□□□□□ -1.53
LINC01238-201ENST00000416204 CSDC2Q9Y534 153 aaKnown RBP5.49□□□□□ -1.53
LINC01238-201ENST00000416204 TINCRA0A1B0GVN0 87 aa5.48□□□□□ -1.53
LINC01238-201ENST00000416204 TMEM223A0PJW6 202 aa5.48□□□□□ -1.53
LINC01238-201ENST00000416204 LEPROTO15243 131 aa5.48□□□□□ -1.53
LINC01238-201ENST00000416204 SMIM13P0DJ93 91 aa5.48□□□□□ -1.53
LINC01238-201ENST00000416204 UBE2V1Q13404 147 aa5.48□□□□□ -1.53
LINC01238-201ENST00000416204 RNF151Q2KHN1 245 aa5.48□□□□□ -1.53
LINC01238-201ENST00000416204 TMEM170BQ5T4T1 132 aa5.48□□□□□ -1.53
LINC01238-201ENST00000416204 TYMSOSQ8TAI1 123 aa5.48□□□□□ -1.53
LINC01238-201ENST00000416204 PLEKHB2Q96CS7 222 aa5.48□□□□□ -1.53
LINC01238-201ENST00000416204 C9orf118A6NHY6 69 aa5.47□□□□□ -1.53
LINC01238-201ENST00000416204 ZNF815PA8K554 130 aa5.47□□□□□ -1.53
LINC01238-201ENST00000416204 NDUFA1O15239 70 aa5.47□□□□□ -1.53
LINC01238-201ENST00000416204 ZNF861PO60384 105 aa5.47□□□□□ -1.53
LINC01238-201ENST00000416204 ZNF22P17026 224 aaPredicted RBP5.47□□□□□ -1.53
LINC01238-201ENST00000416204 LGALS3P17931 250 aaKnown RBP5.47□□□□□ -1.53
LINC01238-201ENST00000416204 SPANXB1Q9NS25 103 aaPredicted RBP5.47□□□□□ -1.53
LINC01238-201ENST00000416204 J3QQQ9 107 aa5.46□□□□□ -1.54
LINC01238-201ENST00000416204 VAMP3Q15836 100 aa5.46□□□□□ -1.54
LINC01238-201ENST00000416204 C9orf129Q5T035 196 aaKnown RBP5.46□□□□□ -1.54
LINC01238-201ENST00000416204 SCGB1D4Q6XE38 83 aa5.46□□□□□ -1.54
LINC01238-201ENST00000416204 FAM19A3Q7Z5A8 133 aa5.46□□□□□ -1.54
LINC01238-201ENST00000416204 FAM104AQ969W3 186 aa5.46□□□□□ -1.54
LINC01238-201ENST00000416204 HIST1H4GQ99525 98 aa5.46□□□□□ -1.54
LINC01238-201ENST00000416204 TTTY13Q9BZ97 58 aa5.46□□□□□ -1.54
LINC01238-201ENST00000416204 C2orf82Q6UX34 121 aa5.45□□□□□ -1.54
LINC01238-201ENST00000416204 GTF2H5Q6ZYL4 71 aa5.45□□□□□ -1.54
LINC01238-201ENST00000416204 IGLV7-46A0A075B6I9 117 aa5.44□□□□□ -1.54
LINC01238-201ENST00000416204 IGLV5-45A0A087WSX0 123 aa5.44□□□□□ -1.54
LINC01238-201ENST00000416204 A0A1B0GWB2 263 aa5.44□□□□□ -1.54
LINC01238-201ENST00000416204 CRYGAP11844 174 aa5.44□□□□□ -1.54
LINC01238-201ENST00000416204 FXYD2P54710 66 aa5.44□□□□□ -1.54
LINC01238-201ENST00000416204 KRTAP13-2Q52LG2 175 aa5.44□□□□□ -1.54
LINC01238-201ENST00000416204 GEMIN7Q9H840 131 aaKnown RBP5.44□□□□□ -1.54
LINC01238-201ENST00000416204 TLX1NBP0CAT3 122 aa5.43□□□□□ -1.54
LINC01238-201ENST00000416204 HERVK_113P63121 156 aa5.43□□□□□ -1.54
LINC01238-201ENST00000416204 LINC00242Q5T6M2 205 aa5.43□□□□□ -1.54
LINC01238-201ENST00000416204 IGHV3OR16-9A0A0B4J2B5 98 aa5.42□□□□□ -1.54
LINC01238-201ENST00000416204 GAGE10A6NGK3 116 aa5.42□□□□□ -1.54
LINC01238-201ENST00000416204 TMEM238C9JI98 176 aa5.42□□□□□ -1.54
LINC01238-201ENST00000416204 H3BUT2 72 aa5.42□□□□□ -1.54
LINC01238-201ENST00000416204 FABP2P12104 132 aa5.42□□□□□ -1.54
LINC01238-201ENST00000416204 LINC01547P58512 204 aaPredicted RBP5.42□□□□□ -1.54
LINC01238-201ENST00000416204 Q6ZVH6 145 aa5.42□□□□□ -1.54
LINC01238-201ENST00000416204 NHP2Q9NX24 153 aaKnown RBP5.42□□□□□ -1.54
LINC01238-201ENST00000416204 A0A1W2PPM0 123 aa5.41□□□□□ -1.54
LINC01238-201ENST00000416204 TIMM17BO60830 172 aa5.41□□□□□ -1.54
LINC01238-201ENST00000416204 TSPEAR-AS2P59090 65 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms