RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 LCE2DQ5TA82 110 aaPredicted RBP8.67□□□□□ -1.02
CPNE1-209ENST00000415920 SPACA4Q8TDM5 124 aa8.67□□□□□ -1.02
CPNE1-209ENST00000415920 XAGE1AQ9HD64 81 aa8.67□□□□□ -1.02
CPNE1-209ENST00000415920 COX17Q14061 63 aa8.66□□□□□ -1.02
CPNE1-209ENST00000415920 DAND5Q8N907 189 aa8.66□□□□□ -1.02
CPNE1-209ENST00000415920 LINC00587B1AMM8 73 aa8.65□□□□□ -1.02
CPNE1-209ENST00000415920 S100A12P80511 92 aa8.65□□□□□ -1.02
CPNE1-209ENST00000415920 Q6ZSA8 131 aa8.65□□□□□ -1.02
CPNE1-209ENST00000415920 LINC00528Q8N1L1 170 aa8.65□□□□□ -1.02
CPNE1-209ENST00000415920 MIR7-3HGQ8N6C7 128 aa8.65□□□□□ -1.02
CPNE1-209ENST00000415920 DPH3Q96FX2 82 aa8.65□□□□□ -1.02
CPNE1-209ENST00000415920 LINC00474Q9P2X8 69 aa8.65□□□□□ -1.02
CPNE1-209ENST00000415920 UBR4Q5T4S7 5183 aa8.64□□□□□ -1.03
CPNE1-209ENST00000415920 COX8AP10176 69 aa8.64□□□□□ -1.03
CPNE1-209ENST00000415920 CIRBPQ14011 172 aaKnown RBP8.64□□□□□ -1.03
CPNE1-209ENST00000415920 C9orf129Q5T035 196 aaKnown RBP8.64□□□□□ -1.03
CPNE1-209ENST00000415920 FAM19A5Q7Z5A7 132 aaPredicted RBP8.64□□□□□ -1.03
CPNE1-209ENST00000415920 C14orf144Q96I85 54 aa8.64□□□□□ -1.03
CPNE1-209ENST00000415920 SND1-IT1Q9HBX3 110 aa8.64□□□□□ -1.03
CPNE1-209ENST00000415920 FAT3Q8TDW7 4589 aa8.64□□□□□ -1.03
CPNE1-209ENST00000415920 KRTAP29-1A8MX34 341 aaPredicted RBP8.63□□□□□ -1.03
CPNE1-209ENST00000415920 TMEM238C9JI98 176 aa8.63□□□□□ -1.03
CPNE1-209ENST00000415920 NPC2P61916 151 aa8.63□□□□□ -1.03
CPNE1-209ENST00000415920 SCXQ7RTU7 201 aa8.63□□□□□ -1.03
CPNE1-209ENST00000415920 FAM168BA1KXE4 195 aa8.62□□□□□ -1.03
CPNE1-209ENST00000415920 MIEN1Q9BRT3 115 aa8.62□□□□□ -1.03
CPNE1-209ENST00000415920 A0A087WYN8 130 aa8.61□□□□□ -1.03
CPNE1-209ENST00000415920 TIMM17BO60830 172 aa8.61□□□□□ -1.03
CPNE1-209ENST00000415920 KRTAP10-4P60372 401 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-209ENST00000415920 BOD1L2Q8IYS8 172 aa8.61□□□□□ -1.03
CPNE1-209ENST00000415920 PLA2G1BP04054 148 aaKnown RBP8.6□□□□□ -1.03
CPNE1-209ENST00000415920 SLC25A34Q6PIV7 304 aa8.6□□□□□ -1.03
CPNE1-209ENST00000415920 CIRBP-AS1Q8TBR5 109 aa8.6□□□□□ -1.03
CPNE1-209ENST00000415920 LITAFQ99732 161 aa8.6□□□□□ -1.03
CPNE1-209ENST00000415920 ADAMTSL4-AS1Q5T5F5 129 aa8.59□□□□□ -1.03
CPNE1-209ENST00000415920 SERTAD4-AS1Q5TG53 156 aa8.59□□□□□ -1.03
CPNE1-209ENST00000415920 PKHD1L1Q86WI1 4243 aa8.59□□□□□ -1.04
CPNE1-209ENST00000415920 M0QXV9 152 aa8.58□□□□□ -1.04
CPNE1-209ENST00000415920 A0A1W2PNN7 141 aa8.57□□□□□ -1.04
CPNE1-209ENST00000415920 DLEU1O43261 78 aa8.57□□□□□ -1.04
CPNE1-209ENST00000415920 NKAPP1Q8N9T2 125 aa8.57□□□□□ -1.04
CPNE1-209ENST00000415920 C12orf57Q99622 126 aa8.57□□□□□ -1.04
CPNE1-209ENST00000415920 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
CPNE1-209ENST00000415920 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
CPNE1-209ENST00000415920 PLAC8Q9NZF1 115 aa8.57□□□□□ -1.04
CPNE1-209ENST00000415920 NCR3O14931 201 aa8.56□□□□□ -1.04
CPNE1-209ENST00000415920 SOSTDC1Q6X4U4 206 aa8.56□□□□□ -1.04
CPNE1-209ENST00000415920 PRO1933Q9H354 126 aa8.56□□□□□ -1.04
CPNE1-209ENST00000415920 RPL24P83731 157 aaKnown RBP8.55□□□□□ -1.04
CPNE1-209ENST00000415920 SRSF9Q13242 221 aaKnown RBP eCLIP8.55□□□□□ -1.04
CPNE1-209ENST00000415920 KRTAP7-1Q8IUC3 87 aa8.55□□□□□ -1.04
CPNE1-209ENST00000415920 Q8NDZ9 215 aa8.55□□□□□ -1.04
CPNE1-209ENST00000415920 LINC00308Q8TCZ7 52 aa8.55□□□□□ -1.04
CPNE1-209ENST00000415920 SPANXB1Q9NS25 103 aaPredicted RBP8.55□□□□□ -1.04
CPNE1-209ENST00000415920 EIF4EBP3O60516 100 aaPredicted RBP8.54□□□□□ -1.04
CPNE1-209ENST00000415920 VPREB1P12018 145 aa8.54□□□□□ -1.04
CPNE1-209ENST00000415920 C2orf91Q6ZV80 131 aa8.54□□□□□ -1.04
CPNE1-209ENST00000415920 PHF5AQ7RTV0 110 aaKnown RBP8.54□□□□□ -1.04
CPNE1-209ENST00000415920 UQCR10Q9UDW1 63 aa8.54□□□□□ -1.04
CPNE1-209ENST00000415920 PLA2G2DQ9UNK4 145 aa8.54□□□□□ -1.04
CPNE1-209ENST00000415920 UBE2BP63146 152 aa8.53□□□□□ -1.04
CPNE1-209ENST00000415920 COPS9Q8WXC6 57 aa8.53□□□□□ -1.04
CPNE1-209ENST00000415920 HIST1H4GQ99525 98 aa8.53□□□□□ -1.04
CPNE1-209ENST00000415920 GAGE10A6NGK3 116 aa8.52□□□□□ -1.05
CPNE1-209ENST00000415920 Q6ZVH6 145 aa8.52□□□□□ -1.05
CPNE1-209ENST00000415920 MRPL55Q7Z7F7 128 aaKnown RBP8.52□□□□□ -1.05
CPNE1-209ENST00000415920 C7orf33Q8WU49 177 aa8.52□□□□□ -1.05
CPNE1-209ENST00000415920 HIGD1BQ9P298 99 aa8.52□□□□□ -1.05
CPNE1-209ENST00000415920 C22orf24Q9Y442 160 aa8.52□□□□□ -1.05
CPNE1-209ENST00000415920 IGLV5-37A0A075B6J1 123 aa8.51□□□□□ -1.05
CPNE1-209ENST00000415920 IFITM1P13164 125 aa8.51□□□□□ -1.05
CPNE1-209ENST00000415920 HNRNPA3P51991 378 aaKnown RBP8.51□□□□□ -1.05
CPNE1-209ENST00000415920 MUSTN1Q8IVN3 82 aa8.51□□□□□ -1.05
CPNE1-209ENST00000415920 LOC107984156A0A0G2JMH3 177 aa8.5□□□□□ -1.05
CPNE1-209ENST00000415920 ARL17AQ8IVW1 177 aa8.5□□□□□ -1.05
CPNE1-209ENST00000415920 LINC00518Q8N0U6 118 aa8.5□□□□□ -1.05
CPNE1-209ENST00000415920 TSTD3H0UI37 97 aa8.49□□□□□ -1.05
CPNE1-209ENST00000415920 NDUFC2O95298 119 aa8.49□□□□□ -1.05
CPNE1-209ENST00000415920 PRR3P79522 188 aaKnown RBP8.49□□□□□ -1.05
CPNE1-209ENST00000415920 LBHQ53QV2 105 aaPredicted RBP8.49□□□□□ -1.05
CPNE1-209ENST00000415920 IGKV2-28A0A075B6P5 120 aa8.48□□□□□ -1.05
CPNE1-209ENST00000415920 RPL37AP8A6NKH3 93 aa8.48□□□□□ -1.05
CPNE1-209ENST00000415920 IGKV2D-28P01615 120 aa8.48□□□□□ -1.05
CPNE1-209ENST00000415920 M0R378 163 aa8.47□□□□□ -1.05
CPNE1-209ENST00000415920 OXTP01178 125 aa8.47□□□□□ -1.05
CPNE1-209ENST00000415920 LINC00167Q96N53 147 aa8.47□□□□□ -1.05
CPNE1-209ENST00000415920 HSD52Q0P140 79 aa8.46□□□□□ -1.06
CPNE1-209ENST00000415920 S100A7L2Q5SY68 101 aa8.46□□□□□ -1.06
CPNE1-209ENST00000415920 TRBV10-2A0A0K0K1G8 114 aa8.45□□□□□ -1.06
CPNE1-209ENST00000415920 A4D1N5 150 aa8.45□□□□□ -1.06
CPNE1-209ENST00000415920 RPL37AP61513 92 aaKnown RBP8.45□□□□□ -1.06
CPNE1-209ENST00000415920 TAL2Q16559 108 aa8.45□□□□□ -1.06
CPNE1-209ENST00000415920 KRTAP11-1Q8IUC1 163 aa8.45□□□□□ -1.06
CPNE1-209ENST00000415920 PPDPFQ9H3Y8 114 aa8.45□□□□□ -1.06
CPNE1-209ENST00000415920 DDTP30046 118 aa8.44□□□□□ -1.06
CPNE1-209ENST00000415920 OR13C6PQ8NH95 151 aa8.44□□□□□ -1.06
CPNE1-209ENST00000415920 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
CPNE1-209ENST00000415920 CEND1Q8N111 149 aa8.43□□□□□ -1.06
CPNE1-209ENST00000415920 IGLV1-50A0A075B6I6 118 aa8.42□□□□□ -1.06
CPNE1-209ENST00000415920 TMEM238LA0A1B0GVL6 79 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms