RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 LINC00587B1AMM8 73 aa8.33□□□□□ -1.08
CNOT4-204ENST00000414802 SMCPP49901 116 aaPredicted RBP8.33□□□□□ -1.08
CNOT4-204ENST00000414802 CIRBPQ14011 172 aaKnown RBP8.33□□□□□ -1.08
CNOT4-204ENST00000414802 TIMM17BO60830 172 aa8.32□□□□□ -1.08
CNOT4-204ENST00000414802 FAM19A5Q7Z5A7 132 aaPredicted RBP8.32□□□□□ -1.08
CNOT4-204ENST00000414802 DPH3Q96FX2 82 aa8.32□□□□□ -1.08
CNOT4-204ENST00000414802 TMEM238C9JI98 176 aa8.31□□□□□ -1.08
CNOT4-204ENST00000414802 DLEU1O43261 78 aa8.31□□□□□ -1.08
CNOT4-204ENST00000414802 EIF4EBP3O60516 100 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-204ENST00000414802 SOSTDC1Q6X4U4 206 aa8.31□□□□□ -1.08
CNOT4-204ENST00000414802 FAT1Q14517 4588 aa8.31□□□□□ -1.08
CNOT4-204ENST00000414802 A0A087WYN8 130 aa8.3□□□□□ -1.08
CNOT4-204ENST00000414802 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
CNOT4-204ENST00000414802 SERTAD4-AS1Q5TG53 156 aa8.3□□□□□ -1.08
CNOT4-204ENST00000414802 C2orf91Q6ZV80 131 aa8.3□□□□□ -1.08
CNOT4-204ENST00000414802 SCXQ7RTU7 201 aa8.3□□□□□ -1.08
CNOT4-204ENST00000414802 Q8NDZ9 215 aa8.3□□□□□ -1.08
CNOT4-204ENST00000414802 SPANXDQ9BXN6 97 aa8.3□□□□□ -1.08
CNOT4-204ENST00000414802 SPANXCQ9NY87 97 aa8.3□□□□□ -1.08
CNOT4-204ENST00000414802 LINC00474Q9P2X8 69 aa8.3□□□□□ -1.08
CNOT4-204ENST00000414802 KRTAP7-1Q8IUC3 87 aa8.29□□□□□ -1.08
CNOT4-204ENST00000414802 LINC00308Q8TCZ7 52 aa8.29□□□□□ -1.08
CNOT4-204ENST00000414802 CIRBP-AS1Q8TBR5 109 aa8.28□□□□□ -1.08
CNOT4-204ENST00000414802 UQCR10Q9UDW1 63 aa8.28□□□□□ -1.08
CNOT4-204ENST00000414802 VPS13BQ7Z7G8 4022 aa8.28□□□□□ -1.08
CNOT4-204ENST00000414802 MIEN1Q9BRT3 115 aa8.27□□□□□ -1.08
CNOT4-204ENST00000414802 SPANXB1Q9NS25 103 aaPredicted RBP8.27□□□□□ -1.08
CNOT4-204ENST00000414802 TSTD3H0UI37 97 aa8.27□□□□□ -1.09
CNOT4-204ENST00000414802 XGP55808 180 aa8.27□□□□□ -1.09
CNOT4-204ENST00000414802 SRSF9Q13242 221 aaKnown RBP eCLIP8.27□□□□□ -1.09
CNOT4-204ENST00000414802 PLAC8Q9NZF1 115 aa8.27□□□□□ -1.09
CNOT4-204ENST00000414802 VPREB1P12018 145 aa8.26□□□□□ -1.09
CNOT4-204ENST00000414802 MUSTN1Q8IVN3 82 aa8.26□□□□□ -1.09
CNOT4-204ENST00000414802 HIGD1BQ9P298 99 aa8.26□□□□□ -1.09
CNOT4-204ENST00000414802 M0QXV9 152 aa8.25□□□□□ -1.09
CNOT4-204ENST00000414802 NCR3O14931 201 aa8.25□□□□□ -1.09
CNOT4-204ENST00000414802 PRR3P79522 188 aaKnown RBP8.25□□□□□ -1.09
CNOT4-204ENST00000414802 PHF5AQ7RTV0 110 aaKnown RBP8.25□□□□□ -1.09
CNOT4-204ENST00000414802 HIST1H4GQ99525 98 aa8.25□□□□□ -1.09
CNOT4-204ENST00000414802 PCP4L1A6NKN8 68 aa8.24□□□□□ -1.09
CNOT4-204ENST00000414802 LOC107984156A0A0G2JMH3 177 aa8.24□□□□□ -1.09
CNOT4-204ENST00000414802 GAGE10A6NGK3 116 aa8.24□□□□□ -1.09
CNOT4-204ENST00000414802 HNRNPA3P51991 378 aaKnown RBP8.24□□□□□ -1.09
CNOT4-204ENST00000414802 ARL17AQ8IVW1 177 aa8.24□□□□□ -1.09
CNOT4-204ENST00000414802 NKAPP1Q8N9T2 125 aa8.24□□□□□ -1.09
CNOT4-204ENST00000414802 PLA2G2DQ9UNK4 145 aa8.24□□□□□ -1.09
CNOT4-204ENST00000414802 C22orf24Q9Y442 160 aa8.24□□□□□ -1.09
CNOT4-204ENST00000414802 IFITM1P13164 125 aa8.23□□□□□ -1.09
CNOT4-204ENST00000414802 Q6ZVH6 145 aa8.23□□□□□ -1.09
CNOT4-204ENST00000414802 IGLV5-37A0A075B6J1 123 aa8.22□□□□□ -1.09
CNOT4-204ENST00000414802 RPL24P83731 157 aaKnown RBP8.22□□□□□ -1.09
CNOT4-204ENST00000414802 EPM2AB3EWF7 344 aa8.21□□□□□ -1.09
CNOT4-204ENST00000414802 J3QL48 77 aa8.21□□□□□ -1.09
CNOT4-204ENST00000414802 C7orf33Q8WU49 177 aa8.21□□□□□ -1.09
CNOT4-204ENST00000414802 PKHD1L1Q86WI1 4243 aa8.21□□□□□ -1.1
CNOT4-204ENST00000414802 CDK2AP2O75956 126 aa8.21□□□□□ -1.1
CNOT4-204ENST00000414802 SMR3BP02814 79 aaPredicted RBP8.21□□□□□ -1.1
CNOT4-204ENST00000414802 MRPL55Q7Z7F7 128 aaKnown RBP8.21□□□□□ -1.1
CNOT4-204ENST00000414802 HERC2O95714 4834 aa8.2□□□□□ -1.1
CNOT4-204ENST00000414802 KRTAP11-1Q8IUC1 163 aa8.2□□□□□ -1.1
CNOT4-204ENST00000414802 COPS9Q8WXC6 57 aa8.2□□□□□ -1.1
CNOT4-204ENST00000414802 LINC00167Q96N53 147 aa8.2□□□□□ -1.1
CNOT4-204ENST00000414802 IGKV2-28A0A075B6P5 120 aa8.19□□□□□ -1.1
CNOT4-204ENST00000414802 RPL37AP8A6NKH3 93 aa8.19□□□□□ -1.1
CNOT4-204ENST00000414802 NDUFC2O95298 119 aa8.19□□□□□ -1.1
CNOT4-204ENST00000414802 IGKV2D-28P01615 120 aa8.19□□□□□ -1.1
CNOT4-204ENST00000414802 UBE2BP63146 152 aa8.19□□□□□ -1.1
CNOT4-204ENST00000414802 HSD52Q0P140 79 aa8.19□□□□□ -1.1
CNOT4-204ENST00000414802 A4D1N5 150 aa8.18□□□□□ -1.1
CNOT4-204ENST00000414802 M0R378 163 aa8.18□□□□□ -1.1
CNOT4-204ENST00000414802 LCE2AQ5TA79 106 aaPredicted RBP8.18□□□□□ -1.1
CNOT4-204ENST00000414802 FXYD2P54710 66 aa8.18□□□□□ -1.1
CNOT4-204ENST00000414802 TAL2Q16559 108 aa8.18□□□□□ -1.1
CNOT4-204ENST00000414802 CEND1Q8N111 149 aa8.18□□□□□ -1.1
CNOT4-204ENST00000414802 CTAG1AP78358 180 aa8.17□□□□□ -1.1
CNOT4-204ENST00000414802 LINC00528Q8N1L1 170 aa8.17□□□□□ -1.1
CNOT4-204ENST00000414802 LINC00337Q8N6G1 96 aa8.17□□□□□ -1.1
CNOT4-204ENST00000414802 PPDPFQ9H3Y8 114 aa8.17□□□□□ -1.1
CNOT4-204ENST00000414802 TRBV10-3A0A0K0K1G6 114 aa8.16□□□□□ -1.1
CNOT4-204ENST00000414802 DDTP30046 118 aa8.16□□□□□ -1.1
CNOT4-204ENST00000414802 LBHQ53QV2 105 aaPredicted RBP8.16□□□□□ -1.1
CNOT4-204ENST00000414802 TRBV10-2A0A0K0K1G8 114 aa8.15□□□□□ -1.1
CNOT4-204ENST00000414802 S100A7L2Q5SY68 101 aa8.14□□□□□ -1.11
CNOT4-204ENST00000414802 OR13C6PQ8NH95 151 aa8.14□□□□□ -1.11
CNOT4-204ENST00000414802 KRTAP17-1Q9BYP8 105 aa8.14□□□□□ -1.11
CNOT4-204ENST00000414802 IGLV1-50A0A075B6I6 118 aa8.13□□□□□ -1.11
CNOT4-204ENST00000414802 HINT1P49773 126 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-204ENST00000414802 PSORS1C2Q9UIG4 136 aa8.13□□□□□ -1.11
CNOT4-204ENST00000414802 IGLV6-57P01721 117 aa8.12□□□□□ -1.11
CNOT4-204ENST00000414802 A6NDN8 102 aa8.11□□□□□ -1.11
CNOT4-204ENST00000414802 CFC1BP0CG36 223 aa8.11□□□□□ -1.11
CNOT4-204ENST00000414802 CFC1P0CG37 223 aa8.11□□□□□ -1.11
CNOT4-204ENST00000414802 BVES-AS1Q5T3Y7 98 aa8.11□□□□□ -1.11
CNOT4-204ENST00000414802 TMEM238LA0A1B0GVL6 79 aa8.11□□□□□ -1.11
CNOT4-204ENST00000414802 A6NJY4 79 aa8.11□□□□□ -1.11
CNOT4-204ENST00000414802 K7ERJ3 54 aa8.11□□□□□ -1.11
CNOT4-204ENST00000414802 RPL13AP40429 203 aaKnown RBP8.11□□□□□ -1.11
CNOT4-204ENST00000414802 RPL37AP61513 92 aaKnown RBP8.11□□□□□ -1.11
CNOT4-204ENST00000414802 NHP2Q9NX24 153 aaKnown RBP8.11□□□□□ -1.11
CNOT4-204ENST00000414802 TRAV13-2A0A0B4J235 113 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms