RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TMEM223A0PJW6 202 aa6.09□□□□□ -1.43
SYNE1-211ENST00000413186 FHL2Q14192 279 aa6.09□□□□□ -1.43
SYNE1-211ENST00000413186 C11orf72Q8NBR9 251 aa6.09□□□□□ -1.43
SYNE1-211ENST00000413186 GCN1Q92616 2671 aaKnown RBP6.09□□□□□ -1.43
SYNE1-211ENST00000413186 LINC01546A6NGU7 62 aa6.09□□□□□ -1.44
SYNE1-211ENST00000413186 A8MTW9 85 aa6.09□□□□□ -1.44
SYNE1-211ENST00000413186 TSHBP01222 138 aa6.09□□□□□ -1.44
SYNE1-211ENST00000413186 Q6ZTC4 211 aa6.09□□□□□ -1.44
SYNE1-211ENST00000413186 LINC00208Q96KT6 92 aa6.09□□□□□ -1.44
SYNE1-211ENST00000413186 COX7CP15954 63 aa6.08□□□□□ -1.44
SYNE1-211ENST00000413186 LINC00269Q8N2A0 174 aa6.08□□□□□ -1.44
SYNE1-211ENST00000413186 NDUFA1O15239 70 aa6.08□□□□□ -1.44
SYNE1-211ENST00000413186 ZNF22P17026 224 aaPredicted RBP6.08□□□□□ -1.44
SYNE1-211ENST00000413186 ATP11AUNQ6ZP68 121 aa6.08□□□□□ -1.44
SYNE1-211ENST00000413186 DIRC1Q969H9 104 aa6.08□□□□□ -1.44
SYNE1-211ENST00000413186 CRYGAP11844 174 aa6.08□□□□□ -1.44
SYNE1-211ENST00000413186 TTTY13Q9BZ97 58 aa6.08□□□□□ -1.44
SYNE1-211ENST00000413186 MIAQ16674 131 aa6.08□□□□□ -1.44
SYNE1-211ENST00000413186 LOC100131303A0A0U1RQF7 123 aa6.07□□□□□ -1.44
SYNE1-211ENST00000413186 LOC107984640A0A0U1RRK4 108 aa6.07□□□□□ -1.44
SYNE1-211ENST00000413186 CEMP1Q6PRD7 247 aaPredicted RBP6.07□□□□□ -1.44
SYNE1-211ENST00000413186 XAGE1AQ9HD64 81 aa6.07□□□□□ -1.44
SYNE1-211ENST00000413186 CRYBG3Q68DQ2 2970 aa6.07□□□□□ -1.44
SYNE1-211ENST00000413186 IGIPA6NJ69 53 aa6.07□□□□□ -1.44
SYNE1-211ENST00000413186 PRLHP81277 87 aa6.07□□□□□ -1.44
SYNE1-211ENST00000413186 IGLV2-18A0A075B6J9 118 aa6.06□□□□□ -1.44
SYNE1-211ENST00000413186 C2orf91Q6ZV80 131 aa6.06□□□□□ -1.44
SYNE1-211ENST00000413186 UBE2D4Q9Y2X8 147 aa6.06□□□□□ -1.44
SYNE1-211ENST00000413186 KTN1-AS1Q86SY8 53 aa6.06□□□□□ -1.44
SYNE1-211ENST00000413186 CHCHD10Q8WYQ3 142 aaPredicted RBP6.05□□□□□ -1.44
SYNE1-211ENST00000413186 FAM30AQ9NZY2 134 aa6.05□□□□□ -1.44
SYNE1-211ENST00000413186 MGAM2Q2M2H8 2515 aa6.05□□□□□ -1.44
SYNE1-211ENST00000413186 MAP1AP78559 2803 aaPredicted RBP6.05□□□□□ -1.44
SYNE1-211ENST00000413186 PLAC8L1A1L4L8 177 aa6.05□□□□□ -1.44
SYNE1-211ENST00000413186 C3orf84H3BNL1 204 aa6.05□□□□□ -1.44
SYNE1-211ENST00000413186 ATP5EP2Q5VTU8 51 aa6.05□□□□□ -1.44
SYNE1-211ENST00000413186 B9D2Q9BPU9 175 aa6.05□□□□□ -1.44
SYNE1-211ENST00000413186 PCOTHQ58A44 107 aa6.05□□□□□ -1.44
SYNE1-211ENST00000413186 SBSPONQ8IVN8 264 aa6.05□□□□□ -1.44
SYNE1-211ENST00000413186 A0A096LNJ9 63 aa6.04□□□□□ -1.44
SYNE1-211ENST00000413186 TRBV7-7A0A0K0K1E9 115 aa6.04□□□□□ -1.44
SYNE1-211ENST00000413186 A8MZ25 164 aa6.04□□□□□ -1.44
SYNE1-211ENST00000413186 EGFEM1PQ0D2K5 195 aa6.04□□□□□ -1.44
SYNE1-211ENST00000413186 KIF25-AS1Q9Y6Z4 181 aa6.04□□□□□ -1.44
SYNE1-211ENST00000413186 WIPF1O43516 503 aa6.04□□□□□ -1.44
SYNE1-211ENST00000413186 ESRGQ1W209 222 aa6.04□□□□□ -1.44
SYNE1-211ENST00000413186 UBR5O95071 2799 aaPredicted RBP6.04□□□□□ -1.44
SYNE1-211ENST00000413186 Q9BRP9 147 aa6.03□□□□□ -1.44
SYNE1-211ENST00000413186 C19orf73Q9NVV2 129 aa6.03□□□□□ -1.44
SYNE1-211ENST00000413186 ITPR2Q14571 2701 aa6.03□□□□□ -1.44
SYNE1-211ENST00000413186 ITPR1Q14643 2758 aa6.03□□□□□ -1.44
SYNE1-211ENST00000413186 GAS8-AS1O95177 125 aa6.03□□□□□ -1.44
SYNE1-211ENST00000413186 CCKP06307 115 aa6.03□□□□□ -1.44
SYNE1-211ENST00000413186 MAPKAPK5-AS1Q8N8E1 139 aa6.03□□□□□ -1.44
SYNE1-211ENST00000413186 H3BNG1 76 aa6.03□□□□□ -1.44
SYNE1-211ENST00000413186 COX7BP24311 80 aa6.03□□□□□ -1.44
SYNE1-211ENST00000413186 CD164L2Q6UWJ8 174 aa6.03□□□□□ -1.44
SYNE1-211ENST00000413186 CRIPTQ9P021 101 aa6.03□□□□□ -1.44
SYNE1-211ENST00000413186 CDKN2A-AS1Q9UH64 79 aa6.03□□□□□ -1.44
SYNE1-211ENST00000413186 IBA57-AS1B1ANH7 110 aa6.02□□□□□ -1.45
SYNE1-211ENST00000413186 MUC7Q8TAX7 377 aa6.02□□□□□ -1.45
SYNE1-211ENST00000413186 Q8NAQ8 132 aa6.02□□□□□ -1.45
SYNE1-211ENST00000413186 TEX15Q9BXT5 2789 aa6.02□□□□□ -1.45
SYNE1-211ENST00000413186 COL6A5A8TX70 2615 aa6.01□□□□□ -1.45
SYNE1-211ENST00000413186 KRTAP10-11P60412 298 aa6.01□□□□□ -1.45
SYNE1-211ENST00000413186 CDC42SE2Q9NRR3 84 aa6.01□□□□□ -1.45
SYNE1-211ENST00000413186 ZNF469Q96JG9 3925 aaPredicted RBP6.01□□□□□ -1.45
SYNE1-211ENST00000413186 LST1O00453 97 aa6.01□□□□□ -1.45
SYNE1-211ENST00000413186 PPDPFQ9H3Y8 114 aa6.01□□□□□ -1.45
SYNE1-211ENST00000413186 A0A0A0MQY5 61 aa6.01□□□□□ -1.45
SYNE1-211ENST00000413186 A0A1B0GU69 56 aa6.01□□□□□ -1.45
SYNE1-211ENST00000413186 K7EIL1 84 aa6.01□□□□□ -1.45
SYNE1-211ENST00000413186 A0A087WVE0 104 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 IGKV2-24A0A0C4DH68 120 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 LINC00959A0A1B0GUT2 108 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 UBE2D1P51668 147 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 CYSRT1A8MQ03 144 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 LY6G6CO95867 125 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 Q6ZSN1 163 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 XGP55808 180 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 MIR7-3HGQ8N6C7 128 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 A0A1B0GUV1 79 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 C6orf99Q4VX62 202 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 UFSP1Q6NVU6 142 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 LYPD5Q6UWN5 251 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 AMELXQ99217 191 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 STAB1Q9NY15 2570 aa6□□□□□ -1.45
SYNE1-211ENST00000413186 LINC00315P59091 139 aa5.99□□□□□ -1.45
SYNE1-211ENST00000413186 DMBT1Q9UGM3 2413 aaPredicted RBP5.99□□□□□ -1.45
SYNE1-211ENST00000413186 IGLV8-61A0A075B6I0 122 aa5.99□□□□□ -1.45
SYNE1-211ENST00000413186 LINC00308Q8TCZ7 52 aa5.98□□□□□ -1.45
SYNE1-211ENST00000413186 IGLV4-69A0A075B6H9 119 aa5.98□□□□□ -1.45
SYNE1-211ENST00000413186 SLPIP03973 132 aa5.98□□□□□ -1.45
SYNE1-211ENST00000413186 LIMD2Q9BT23 127 aa5.98□□□□□ -1.45
SYNE1-211ENST00000413186 APCP25054 2843 aa5.98□□□□□ -1.45
SYNE1-211ENST00000413186 UTP20O75691 2785 aaKnown RBP5.97□□□□□ -1.45
SYNE1-211ENST00000413186 KMT2BQ9UMN6 2715 aaPredicted RBP5.97□□□□□ -1.45
SYNE1-211ENST00000413186 A0A087WZ39 114 aa5.97□□□□□ -1.45
SYNE1-211ENST00000413186 CD164Q04900 197 aa5.97□□□□□ -1.45
SYNE1-211ENST00000413186 SYCNQ0VAF6 134 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms