RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 FUSP35637 526 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDC42-204ENST00000411827 TAL2Q16559 108 aa11.91□□□□□ -0.5
CDC42-204ENST00000411827 ADAMTSL4-AS1Q5T5F5 129 aa11.91□□□□□ -0.5
CDC42-204ENST00000411827 SPACA4Q8TDM5 124 aa11.91□□□□□ -0.5
CDC42-204ENST00000411827 DPH3Q96FX2 82 aa11.91□□□□□ -0.5
CDC42-204ENST00000411827 KRTAP10-1P60331 282 aa11.9□□□□□ -0.5
CDC42-204ENST00000411827 XAGE1AQ9HD64 81 aa11.9□□□□□ -0.5
CDC42-204ENST00000411827 TP73-AS1Q9UF72 201 aa11.9□□□□□ -0.5
CDC42-204ENST00000411827 LINC00308Q8TCZ7 52 aa11.89□□□□□ -0.51
CDC42-204ENST00000411827 PKD1P98161 4303 aa11.89□□□□□ -0.51
CDC42-204ENST00000411827 NDUFC2O95298 119 aa11.88□□□□□ -0.51
CDC42-204ENST00000411827 C9orf129Q5T035 196 aaKnown RBP11.88□□□□□ -0.51
CDC42-204ENST00000411827 HIST1H4GQ99525 98 aa11.88□□□□□ -0.51
CDC42-204ENST00000411827 C2orf91Q6ZV80 131 aa11.87□□□□□ -0.51
CDC42-204ENST00000411827 DAND5Q8N907 189 aa11.87□□□□□ -0.51
CDC42-204ENST00000411827 EPM2AB3EWF7 344 aa11.86□□□□□ -0.51
CDC42-204ENST00000411827 HNRNPA3P51991 378 aaKnown RBP11.86□□□□□ -0.51
CDC42-204ENST00000411827 PRO1933Q9H354 126 aa11.86□□□□□ -0.51
CDC42-204ENST00000411827 PLAC8Q9NZF1 115 aa11.86□□□□□ -0.51
CDC42-204ENST00000411827 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.86□□□□□ -0.51
CDC42-204ENST00000411827 IGLV5-37A0A075B6J1 123 aa11.85□□□□□ -0.51
CDC42-204ENST00000411827 CHTF8P0CG12 524 aa11.85□□□□□ -0.51
CDC42-204ENST00000411827 PCLOQ9Y6V0 5065 aa11.84□□□□□ -0.51
CDC42-204ENST00000411827 KRTAP17-1Q9BYP8 105 aa11.84□□□□□ -0.51
CDC42-204ENST00000411827 TRBV10-2A0A0K0K1G8 114 aa11.83□□□□□ -0.52
CDC42-204ENST00000411827 HSD52Q0P140 79 aa11.83□□□□□ -0.52
CDC42-204ENST00000411827 LBHQ53QV2 105 aaPredicted RBP11.83□□□□□ -0.52
CDC42-204ENST00000411827 NKAPP1Q8N9T2 125 aa11.83□□□□□ -0.52
CDC42-204ENST00000411827 RYR1P21817 5038 aa11.83□□□□□ -0.52
CDC42-204ENST00000411827 A0A087WYN8 130 aa11.82□□□□□ -0.52
CDC42-204ENST00000411827 MUSTN1Q8IVN3 82 aa11.82□□□□□ -0.52
CDC42-204ENST00000411827 TMEM238LA0A1B0GVL6 79 aa11.81□□□□□ -0.52
CDC42-204ENST00000411827 A6NJY4 79 aa11.81□□□□□ -0.52
CDC42-204ENST00000411827 VPREB1P12018 145 aa11.81□□□□□ -0.52
CDC42-204ENST00000411827 SOSTDC1Q6X4U4 206 aa11.81□□□□□ -0.52
CDC42-204ENST00000411827 PANO1I0J062 215 aa11.8□□□□□ -0.52
CDC42-204ENST00000411827 FAM30AQ9NZY2 134 aa11.8□□□□□ -0.52
CDC42-204ENST00000411827 CBY1Q9Y3M2 126 aa11.8□□□□□ -0.52
CDC42-204ENST00000411827 A0A1W2PNN7 141 aa11.79□□□□□ -0.52
CDC42-204ENST00000411827 M0R378 163 aa11.79□□□□□ -0.52
CDC42-204ENST00000411827 NPC2P61916 151 aa11.79□□□□□ -0.52
CDC42-204ENST00000411827 CEND1Q8N111 149 aa11.79□□□□□ -0.52
CDC42-204ENST00000411827 CDK2AP2O75956 126 aa11.78□□□□□ -0.52
CDC42-204ENST00000411827 FAM19A5Q7Z5A7 132 aaPredicted RBP11.78□□□□□ -0.52
CDC42-204ENST00000411827 C22orf24Q9Y442 160 aa11.78□□□□□ -0.52
CDC42-204ENST00000411827 FAM168BA1KXE4 195 aa11.77□□□□□ -0.53
CDC42-204ENST00000411827 M0QXV9 152 aa11.77□□□□□ -0.53
CDC42-204ENST00000411827 SERTAD4-AS1Q5TG53 156 aa11.77□□□□□ -0.53
CDC42-204ENST00000411827 SCXQ7RTU7 201 aa11.77□□□□□ -0.53
CDC42-204ENST00000411827 MRPL55Q7Z7F7 128 aaKnown RBP11.77□□□□□ -0.53
CDC42-204ENST00000411827 CIRBP-AS1Q8TBR5 109 aa11.77□□□□□ -0.53
CDC42-204ENST00000411827 M0R143 59 aa11.76□□□□□ -0.53
CDC42-204ENST00000411827 EIF4EBP3O60516 100 aaPredicted RBP11.76□□□□□ -0.53
CDC42-204ENST00000411827 A4D1N5 150 aa11.75□□□□□ -0.53
CDC42-204ENST00000411827 DDTP30046 118 aa11.75□□□□□ -0.53
CDC42-204ENST00000411827 TRAV13-2A0A0B4J235 113 aa11.74□□□□□ -0.53
CDC42-204ENST00000411827 KRTAP7-1Q8IUC3 87 aa11.74□□□□□ -0.53
CDC42-204ENST00000411827 C7orf33Q8WU49 177 aa11.74□□□□□ -0.53
CDC42-204ENST00000411827 LRP1BQ9NZR2 4599 aa11.74□□□□□ -0.53
CDC42-204ENST00000411827 TMEM126AQ9H061 195 aa11.73□□□□□ -0.53
CDC42-204ENST00000411827 CTAG1AP78358 180 aa11.72□□□□□ -0.53
CDC42-204ENST00000411827 S100A7L2Q5SY68 101 aa11.72□□□□□ -0.53
CDC42-204ENST00000411827 ABCA13Q86UQ4 5058 aa11.71□□□□□ -0.53
CDC42-204ENST00000411827 Q8NDZ9 215 aa11.71□□□□□ -0.53
CDC42-204ENST00000411827 HSPG2P98160 4391 aa11.7□□□□□ -0.54
CDC42-204ENST00000411827 NCR3O14931 201 aa11.7□□□□□ -0.54
CDC42-204ENST00000411827 XGP55808 180 aa11.7□□□□□ -0.54
CDC42-204ENST00000411827 LINC00167Q96N53 147 aa11.7□□□□□ -0.54
CDC42-204ENST00000411827 IGKV2-28A0A075B6P5 120 aa11.69□□□□□ -0.54
CDC42-204ENST00000411827 A0A0B4J2C4 111 aa11.69□□□□□ -0.54
CDC42-204ENST00000411827 IGKV2D-28P01615 120 aa11.69□□□□□ -0.54
CDC42-204ENST00000411827 IGLV6-57P01721 117 aa11.69□□□□□ -0.54
CDC42-204ENST00000411827 UBE2BP63146 152 aa11.69□□□□□ -0.54
CDC42-204ENST00000411827 PRR3P79522 188 aaKnown RBP11.69□□□□□ -0.54
CDC42-204ENST00000411827 IGLV1-50A0A075B6I6 118 aa11.68□□□□□ -0.54
CDC42-204ENST00000411827 BVES-AS1Q5T3Y7 98 aa11.67□□□□□ -0.54
CDC42-204ENST00000411827 PHF5AQ7RTV0 110 aaKnown RBP11.67□□□□□ -0.54
CDC42-204ENST00000411827 OR13C6PQ8NH95 151 aa11.67□□□□□ -0.54
CDC42-204ENST00000411827 RAB37Q96AX2 223 aa11.67□□□□□ -0.54
CDC42-204ENST00000411827 A6NDN8 102 aa11.66□□□□□ -0.54
CDC42-204ENST00000411827 FXYD2P54710 66 aa11.66□□□□□ -0.54
CDC42-204ENST00000411827 LINC00337Q8N6G1 96 aa11.66□□□□□ -0.54
CDC42-204ENST00000411827 KCNQ1DNQ9H478 68 aa11.66□□□□□ -0.54
CDC42-204ENST00000411827 DNAH5Q8TE73 4624 aa11.65□□□□□ -0.54
CDC42-204ENST00000411827 PRYO14603 147 aa11.65□□□□□ -0.54
CDC42-204ENST00000411827 CFC1BP0CG36 223 aa11.65□□□□□ -0.54
CDC42-204ENST00000411827 CFC1P0CG37 223 aa11.65□□□□□ -0.54
CDC42-204ENST00000411827 APOBP04114 4563 aaKnown RBP11.65□□□□□ -0.54
CDC42-204ENST00000411827 TRBV10-3A0A0K0K1G6 114 aa11.64□□□□□ -0.55
CDC42-204ENST00000411827 A0A1B0GWB2 263 aa11.64□□□□□ -0.55
CDC42-204ENST00000411827 GAGE10A6NGK3 116 aa11.64□□□□□ -0.55
CDC42-204ENST00000411827 PRO1854Q9UHT4 67 aa11.64□□□□□ -0.55
CDC42-204ENST00000411827 RPL37AP8A6NKH3 93 aa11.62□□□□□ -0.55
CDC42-204ENST00000411827 HINT1P49773 126 aaPredicted RBP11.62□□□□□ -0.55
CDC42-204ENST00000411827 NHP2Q9NX24 153 aaKnown RBP11.62□□□□□ -0.55
CDC42-204ENST00000411827 TRAV23DV6A0A075B6W5 121 aa11.6□□□□□ -0.55
CDC42-204ENST00000411827 REG3GQ6UW15 175 aa11.6□□□□□ -0.55
CDC42-204ENST00000411827 RPL13AP40429 203 aaKnown RBP11.59□□□□□ -0.55
CDC42-204ENST00000411827 TRBV7-6A0A0J9YX20 115 aa11.58□□□□□ -0.56
CDC42-204ENST00000411827 FAM229AH3BQW9 127 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms