RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 A0A0J9YWU9 116 aa10.73□□□□□ -0.69
HOXD3-202ENST00000410016 LINC00526Q96FQ7 95 aa10.73□□□□□ -0.69
HOXD3-202ENST00000410016 SPAG11BQ08648 103 aa10.73□□□□□ -0.69
HOXD3-202ENST00000410016 CYSRT1A8MQ03 144 aa10.72□□□□□ -0.69
HOXD3-202ENST00000410016 LINC00846Q9NV44 126 aa10.72□□□□□ -0.69
HOXD3-202ENST00000410016 LYPD5Q6UWN5 251 aa10.71□□□□□ -0.69
HOXD3-202ENST00000410016 C6orf99Q4VX62 202 aa10.7□□□□□ -0.7
HOXD3-202ENST00000410016 MUC7Q8TAX7 377 aa10.7□□□□□ -0.7
HOXD3-202ENST00000410016 C3orf22Q8N5N4 141 aa10.7□□□□□ -0.7
HOXD3-202ENST00000410016 UQCRQO14949 82 aa10.69□□□□□ -0.7
HOXD3-202ENST00000410016 TMEM256-PLSCR3K7ERE1 68 aa10.68□□□□□ -0.7
HOXD3-202ENST00000410016 GVQW2A0A096LPI5 108 aaPredicted RBP10.67□□□□□ -0.7
HOXD3-202ENST00000410016 CCKP06307 115 aa10.67□□□□□ -0.7
HOXD3-202ENST00000410016 S100A7L2Q5SY68 101 aa10.67□□□□□ -0.7
HOXD3-202ENST00000410016 LINC00575Q6W349 94 aa10.67□□□□□ -0.7
HOXD3-202ENST00000410016 LOC107984640A0A0U1RRK4 108 aa10.66□□□□□ -0.7
HOXD3-202ENST00000410016 JMJD7-PLA2G4BH0Y9G9 81 aa10.66□□□□□ -0.7
HOXD3-202ENST00000410016 IGLV6-57P01721 117 aa10.66□□□□□ -0.7
HOXD3-202ENST00000410016 C9orf153Q5TBE3 101 aa10.66□□□□□ -0.7
HOXD3-202ENST00000410016 HIST1H4AP62805 103 aaKnown RBP10.65□□□□□ -0.7
HOXD3-202ENST00000410016 C6orf48Q9UBA6 75 aa10.65□□□□□ -0.71
HOXD3-202ENST00000410016 Q6JHZ5 121 aa10.64□□□□□ -0.71
HOXD3-202ENST00000410016 ANK2Q01484 3957 aa10.63□□□□□ -0.71
HOXD3-202ENST00000410016 RPL18AQ02543 176 aaKnown RBP10.63□□□□□ -0.71
HOXD3-202ENST00000410016 OXLD1Q5BKU9 147 aa10.63□□□□□ -0.71
HOXD3-202ENST00000410016 IGKV3D-7A0A0C4DH55 119 aa10.62□□□□□ -0.71
HOXD3-202ENST00000410016 H3BNG1 76 aa10.62□□□□□ -0.71
HOXD3-202ENST00000410016 WFDC10BQ8IUB3 73 aa10.62□□□□□ -0.71
HOXD3-202ENST00000410016 KRTAP10-11P60412 298 aa10.62□□□□□ -0.71
HOXD3-202ENST00000410016 KPRPQ5T749 579 aaPredicted RBP10.62□□□□□ -0.71
HOXD3-202ENST00000410016 KRTAP26-1Q6PEX3 210 aa10.62□□□□□ -0.71
HOXD3-202ENST00000410016 RETNQ9HD89 108 aa10.62□□□□□ -0.71
HOXD3-202ENST00000410016 hADV29S1A0JD25 119 aa10.61□□□□□ -0.71
HOXD3-202ENST00000410016 CRYGAP11844 174 aa10.6□□□□□ -0.71
HOXD3-202ENST00000410016 XAGE1AQ9HD64 81 aa10.6□□□□□ -0.71
HOXD3-202ENST00000410016 PKD1L1Q8TDX9 2849 aa10.6□□□□□ -0.71
HOXD3-202ENST00000410016 Q6ZTC4 211 aa10.59□□□□□ -0.71
HOXD3-202ENST00000410016 TRBV10-3A0A0K0K1G6 114 aa10.58□□□□□ -0.72
HOXD3-202ENST00000410016 C2orf48Q96LS8 159 aa10.58□□□□□ -0.72
HOXD3-202ENST00000410016 HIGD2BQ4VC39 106 aa10.57□□□□□ -0.72
HOXD3-202ENST00000410016 A0A087WVE0 104 aa10.55□□□□□ -0.72
HOXD3-202ENST00000410016 ZNF561-AS1K7EIQ3 104 aa10.55□□□□□ -0.72
HOXD3-202ENST00000410016 COX7CP15954 63 aa10.55□□□□□ -0.72
HOXD3-202ENST00000410016 ESRGQ1W209 222 aa10.55□□□□□ -0.72
HOXD3-202ENST00000410016 C3orf56Q8N813 242 aa10.55□□□□□ -0.72
HOXD3-202ENST00000410016 TRAV23DV6A0A075B6W5 121 aa10.55□□□□□ -0.72
HOXD3-202ENST00000410016 TMEM258P61165 79 aa10.55□□□□□ -0.72
HOXD3-202ENST00000410016 ATOX1O00244 68 aa10.54□□□□□ -0.72
HOXD3-202ENST00000410016 RBM3P98179 157 aaKnown RBP10.54□□□□□ -0.72
HOXD3-202ENST00000410016 C15orf56Q8N910 161 aa10.54□□□□□ -0.72
HOXD3-202ENST00000410016 CAMK2N2Q96S95 79 aa10.54□□□□□ -0.72
HOXD3-202ENST00000410016 EGFEM1PQ0D2K5 195 aa10.54□□□□□ -0.72
HOXD3-202ENST00000410016 Q6ZQT0 140 aa10.54□□□□□ -0.72
HOXD3-202ENST00000410016 Q6ZQY7 126 aa10.54□□□□□ -0.72
HOXD3-202ENST00000410016 VPREB1P12018 145 aa10.53□□□□□ -0.72
HOXD3-202ENST00000410016 Q6ZRU5 148 aa10.53□□□□□ -0.72
HOXD3-202ENST00000410016 TENM3Q9P273 2699 aa10.53□□□□□ -0.72
HOXD3-202ENST00000410016 LOC110117498A0A087WWA1 95 aa10.52□□□□□ -0.73
HOXD3-202ENST00000410016 DIRC1Q969H9 104 aa10.52□□□□□ -0.73
HOXD3-202ENST00000410016 ZNF73O43830 326 aaPredicted RBP10.52□□□□□ -0.73
HOXD3-202ENST00000410016 DPH3Q96FX2 82 aa10.51□□□□□ -0.73
HOXD3-202ENST00000410016 PRO0628Q9UI54 55 aa10.51□□□□□ -0.73
HOXD3-202ENST00000410016 CMYA5Q8N3K9 4069 aa10.51□□□□□ -0.73
HOXD3-202ENST00000410016 LAMTOR3Q9UHA4 124 aa10.51□□□□□ -0.73
HOXD3-202ENST00000410016 ATP5EP2Q5VTU8 51 aa10.5□□□□□ -0.73
HOXD3-202ENST00000410016 NDUFC2-KCTD14E9PQ53 114 aa10.49□□□□□ -0.73
HOXD3-202ENST00000410016 M0R2N4 97 aa10.49□□□□□ -0.73
HOXD3-202ENST00000410016 ELOF1P60002 83 aaKnown RBP10.49□□□□□ -0.73
HOXD3-202ENST00000410016 FBN1P35555 2871 aaKnown RBP10.49□□□□□ -0.73
HOXD3-202ENST00000410016 F8P00451 2351 aa10.48□□□□□ -0.73
HOXD3-202ENST00000410016 USP17L23D6RBM5 183 aa10.48□□□□□ -0.73
HOXD3-202ENST00000410016 LINC01556Q5JQF7 62 aa10.48□□□□□ -0.73
HOXD3-202ENST00000410016 TRBV7-6A0A0J9YX20 115 aa10.48□□□□□ -0.73
HOXD3-202ENST00000410016 H3BQ85 93 aa10.48□□□□□ -0.73
HOXD3-202ENST00000410016 UBL5Q9BZL1 73 aa10.48□□□□□ -0.73
HOXD3-202ENST00000410016 COX7BP24311 80 aa10.47□□□□□ -0.73
HOXD3-202ENST00000410016 Q5XG85 94 aa10.47□□□□□ -0.73
HOXD3-202ENST00000410016 M0R378 163 aa10.47□□□□□ -0.73
HOXD3-202ENST00000410016 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.47□□□□□ -0.73
HOXD3-202ENST00000410016 C1orf43Q9BWL3 253 aa10.47□□□□□ -0.73
HOXD3-202ENST00000410016 DEFB131BA0A096LNP1 70 aa10.46□□□□□ -0.73
HOXD3-202ENST00000410016 KRTAP24-1Q3LI83 254 aa10.46□□□□□ -0.73
HOXD3-202ENST00000410016 Q6ZRP5 223 aa10.46□□□□□ -0.74
HOXD3-202ENST00000410016 FAM19A1Q7Z5A9 133 aa10.46□□□□□ -0.74
HOXD3-202ENST00000410016 SERP2Q8N6R1 65 aa10.45□□□□□ -0.74
HOXD3-202ENST00000410016 DSCR8Q96T75 97 aa10.45□□□□□ -0.74
HOXD3-202ENST00000410016 STAB1Q9NY15 2570 aa10.45□□□□□ -0.74
HOXD3-202ENST00000410016 C11orf45Q8TAV5 145 aa10.44□□□□□ -0.74
HOXD3-202ENST00000410016 DNAH3Q8TD57 4116 aa10.44□□□□□ -0.74
HOXD3-202ENST00000410016 IGKV2D-24A0A075B6R9 120 aa10.44□□□□□ -0.74
HOXD3-202ENST00000410016 C4orf26Q17RF5 130 aa10.44□□□□□ -0.74
HOXD3-202ENST00000410016 PDE6GP18545 87 aa10.43□□□□□ -0.74
HOXD3-202ENST00000410016 HRCT1Q6UXD1 115 aa10.43□□□□□ -0.74
HOXD3-202ENST00000410016 LINC00528Q8N1L1 170 aa10.43□□□□□ -0.74
HOXD3-202ENST00000410016 TRBV7-4A0A0J9YYF1 115 aa10.42□□□□□ -0.74
HOXD3-202ENST00000410016 CYSTM1Q9H1C7 97 aa10.42□□□□□ -0.74
HOXD3-202ENST00000410016 UPK3BQ9BT76 320 aa10.41□□□□□ -0.74
HOXD3-202ENST00000410016 DNAH10OSP0CZ25 163 aa10.41□□□□□ -0.74
HOXD3-202ENST00000410016 SYCNQ0VAF6 134 aa10.4□□□□□ -0.74
HOXD3-202ENST00000410016 Q6ZVQ6 151 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms