RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 CLPSL2Q6UWE3 100 aa13.47□□□□□ -0.25
LIMS2-207ENST00000409808 CHCHD10Q8WYQ3 142 aaPredicted RBP13.47□□□□□ -0.25
LIMS2-207ENST00000409808 C9orf129Q5T035 196 aaKnown RBP13.46□□□□□ -0.25
LIMS2-207ENST00000409808 Q6JHZ5 121 aa13.46□□□□□ -0.26
LIMS2-207ENST00000409808 JMJD7-PLA2G4BH0Y9G9 81 aa13.45□□□□□ -0.26
LIMS2-207ENST00000409808 KPRPQ5T749 579 aaPredicted RBP13.45□□□□□ -0.26
LIMS2-207ENST00000409808 NANOS2P60321 138 aaKnown RBP13.45□□□□□ -0.26
LIMS2-207ENST00000409808 REG3AQ06141 175 aa13.45□□□□□ -0.26
LIMS2-207ENST00000409808 UQCRQO14949 82 aa13.44□□□□□ -0.26
LIMS2-207ENST00000409808 Q6ZTC4 211 aa13.44□□□□□ -0.26
LIMS2-207ENST00000409808 C3orf22Q8N5N4 141 aa13.44□□□□□ -0.26
LIMS2-207ENST00000409808 Q8N814 137 aa13.44□□□□□ -0.26
LIMS2-207ENST00000409808 HUWE1Q7Z6Z7 4374 aaKnown RBP13.44□□□□□ -0.26
LIMS2-207ENST00000409808 HIST1H4AP62805 103 aaKnown RBP13.44□□□□□ -0.26
LIMS2-207ENST00000409808 TMEM256-PLSCR3K7ERE1 68 aa13.43□□□□□ -0.26
LIMS2-207ENST00000409808 ANGP03950 147 aaKnown RBP13.43□□□□□ -0.26
LIMS2-207ENST00000409808 SLPIP03973 132 aa13.43□□□□□ -0.26
LIMS2-207ENST00000409808 SMIM20Q8N5G0 67 aa13.43□□□□□ -0.26
LIMS2-207ENST00000409808 NCR3O14931 201 aa13.42□□□□□ -0.26
LIMS2-207ENST00000409808 CCKP06307 115 aa13.42□□□□□ -0.26
LIMS2-207ENST00000409808 LINC00846Q9NV44 126 aa13.41□□□□□ -0.26
LIMS2-207ENST00000409808 ATOX1O00244 68 aa13.41□□□□□ -0.26
LIMS2-207ENST00000409808 S100A7L2Q5SY68 101 aa13.4□□□□□ -0.26
LIMS2-207ENST00000409808 LINC00526Q96FQ7 95 aa13.4□□□□□ -0.26
LIMS2-207ENST00000409808 TM2D3Q9BRN9 247 aa13.39□□□□□ -0.27
LIMS2-207ENST00000409808 PRR3P79522 188 aaKnown RBP13.38□□□□□ -0.27
LIMS2-207ENST00000409808 C9orf153Q5TBE3 101 aa13.38□□□□□ -0.27
LIMS2-207ENST00000409808 Q8N3U1 123 aa13.38□□□□□ -0.27
LIMS2-207ENST00000409808 C11orf45Q8TAV5 145 aa13.38□□□□□ -0.27
LIMS2-207ENST00000409808 COX7CP15954 63 aa13.37□□□□□ -0.27
LIMS2-207ENST00000409808 IGLV10-54A0A075B6I4 117 aa13.36□□□□□ -0.27
LIMS2-207ENST00000409808 LELP1Q5T871 98 aa13.36□□□□□ -0.27
LIMS2-207ENST00000409808 COL7A1Q02388 2944 aa13.36□□□□□ -0.27
LIMS2-207ENST00000409808 RPL18AQ02543 176 aaKnown RBP13.34□□□□□ -0.27
LIMS2-207ENST00000409808 SPAG11BQ08648 103 aa13.33□□□□□ -0.28
LIMS2-207ENST00000409808 C6orf99Q4VX62 202 aa13.33□□□□□ -0.28
LIMS2-207ENST00000409808 C9orf116Q5BN46 136 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-207ENST00000409808 ATP5EP2Q5VTU8 51 aa13.33□□□□□ -0.28
LIMS2-207ENST00000409808 LINC00575Q6W349 94 aa13.33□□□□□ -0.28
LIMS2-207ENST00000409808 IGKV3D-7A0A0C4DH55 119 aa13.32□□□□□ -0.28
LIMS2-207ENST00000409808 C2orf48Q96LS8 159 aa13.32□□□□□ -0.28
LIMS2-207ENST00000409808 DNAH9Q9NYC9 4486 aa13.32□□□□□ -0.28
LIMS2-207ENST00000409808 DEFB131BA0A096LNP1 70 aa13.31□□□□□ -0.28
LIMS2-207ENST00000409808 PRR34Q9NV39 138 aa13.31□□□□□ -0.28
LIMS2-207ENST00000409808 H3BQ85 93 aa13.31□□□□□ -0.28
LIMS2-207ENST00000409808 LYPD5Q6UWN5 251 aa13.3□□□□□ -0.28
LIMS2-207ENST00000409808 DNHD1Q96M86 4753 aa13.29□□□□□ -0.28
LIMS2-207ENST00000409808 GVQW2A0A096LPI5 108 aaPredicted RBP13.29□□□□□ -0.28
LIMS2-207ENST00000409808 CRYGAP11844 174 aa13.29□□□□□ -0.28
LIMS2-207ENST00000409808 UNQ6190/PRO20217Q6UXQ8 127 aa13.29□□□□□ -0.28
LIMS2-207ENST00000409808 hADV29S1A0JD25 119 aa13.28□□□□□ -0.28
LIMS2-207ENST00000409808 C10orf25Q5T742 122 aa13.27□□□□□ -0.28
LIMS2-207ENST00000409808 Q8NDZ9 215 aa13.27□□□□□ -0.28
LIMS2-207ENST00000409808 IGLV6-57P01721 117 aa13.27□□□□□ -0.29
LIMS2-207ENST00000409808 H3BNG1 76 aa13.26□□□□□ -0.29
LIMS2-207ENST00000409808 C6orf223Q8N319 242 aa13.25□□□□□ -0.29
LIMS2-207ENST00000409808 ZNF561-AS1K7EIQ3 104 aa13.25□□□□□ -0.29
LIMS2-207ENST00000409808 STAB2Q8WWQ8 2551 aa13.25□□□□□ -0.29
LIMS2-207ENST00000409808 SERP2Q8N6R1 65 aa13.24□□□□□ -0.29
LIMS2-207ENST00000409808 KLK12Q9UKR0 248 aa13.24□□□□□ -0.29
LIMS2-207ENST00000409808 TRBV10-3A0A0K0K1G6 114 aa13.24□□□□□ -0.29
LIMS2-207ENST00000409808 LOC110117498A0A087WWA1 95 aa13.23□□□□□ -0.29
LIMS2-207ENST00000409808 RBM3P98179 157 aaKnown RBP13.23□□□□□ -0.29
LIMS2-207ENST00000409808 ESRGQ1W209 222 aa13.23□□□□□ -0.29
LIMS2-207ENST00000409808 ENHOQ6UWT2 76 aa13.23□□□□□ -0.29
LIMS2-207ENST00000409808 UBL5Q9BZL1 73 aa13.23□□□□□ -0.29
LIMS2-207ENST00000409808 USP17L23D6RBM5 183 aa13.22□□□□□ -0.29
LIMS2-207ENST00000409808 WFDC10BQ8IUB3 73 aa13.22□□□□□ -0.29
LIMS2-207ENST00000409808 TRAV10A0A0B4J240 114 aa13.21□□□□□ -0.3
LIMS2-207ENST00000409808 A0A087WVE0 104 aa13.19□□□□□ -0.3
LIMS2-207ENST00000409808 GHRHP01286 108 aa13.19□□□□□ -0.3
LIMS2-207ENST00000409808 PDE6GP18545 87 aa13.19□□□□□ -0.3
LIMS2-207ENST00000409808 Q6ZQT0 140 aa13.19□□□□□ -0.3
LIMS2-207ENST00000409808 B9D2Q9BPU9 175 aa13.18□□□□□ -0.3
LIMS2-207ENST00000409808 C6orf48Q9UBA6 75 aa13.17□□□□□ -0.3
LIMS2-207ENST00000409808 LAMTOR3Q9UHA4 124 aa13.17□□□□□ -0.3
LIMS2-207ENST00000409808 DIRC1Q969H9 104 aa13.16□□□□□ -0.3
LIMS2-207ENST00000409808 TRAV23DV6A0A075B6W5 121 aa13.16□□□□□ -0.3
LIMS2-207ENST00000409808 TRBV7-6A0A0J9YX20 115 aa13.16□□□□□ -0.3
LIMS2-207ENST00000409808 MEGF8Q7Z7M0 2845 aa13.15□□□□□ -0.3
LIMS2-207ENST00000409808 PRKDCP78527 4128 aaKnown RBP13.15□□□□□ -0.3
LIMS2-207ENST00000409808 DSCR8Q96T75 97 aa13.14□□□□□ -0.31
LIMS2-207ENST00000409808 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-207ENST00000409808 UPK3BQ9BT76 320 aa13.13□□□□□ -0.31
LIMS2-207ENST00000409808 Q6ZQY7 126 aa13.12□□□□□ -0.31
LIMS2-207ENST00000409808 BCE1O60756 84 aa13.11□□□□□ -0.31
LIMS2-207ENST00000409808 ZNF73O43830 326 aaPredicted RBP13.11□□□□□ -0.31
LIMS2-207ENST00000409808 COX7BP24311 80 aa13.1□□□□□ -0.31
LIMS2-207ENST00000409808 RPS28P62857 69 aaKnown RBP13.1□□□□□ -0.31
LIMS2-207ENST00000409808 TMEM258P61165 79 aa13.09□□□□□ -0.31
LIMS2-207ENST00000409808 CAMK2N2Q96S95 79 aa13.09□□□□□ -0.31
LIMS2-207ENST00000409808 XAGE1AQ9HD64 81 aa13.09□□□□□ -0.31
LIMS2-207ENST00000409808 ELOF1P60002 83 aaKnown RBP13.08□□□□□ -0.31
LIMS2-207ENST00000409808 F8WDY8 70 aa13.08□□□□□ -0.32
LIMS2-207ENST00000409808 FAM19A1Q7Z5A9 133 aa13.08□□□□□ -0.32
LIMS2-207ENST00000409808 M0R378 163 aa13.07□□□□□ -0.32
LIMS2-207ENST00000409808 LINC00588Q9Y4M8 146 aa13.07□□□□□ -0.32
LIMS2-207ENST00000409808 J3KT08 172 aa13.07□□□□□ -0.32
LIMS2-207ENST00000409808 VPREB1P12018 145 aa13.07□□□□□ -0.32
LIMS2-207ENST00000409808 KRTAP26-1Q6PEX3 210 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms