RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ANKRD17O75179 2603 aaKnown RBP5.88□□□□□ -1.47
SCN9A-203ENST00000409672 C1orf64Q8NEQ6 169 aa5.88□□□□□ -1.47
SCN9A-203ENST00000409672 TSPEAR-AS2P59090 65 aa5.88□□□□□ -1.47
SCN9A-203ENST00000409672 PCSK5Q92824 1860 aa5.87□□□□□ -1.47
SCN9A-203ENST00000409672 LINC01554Q52M75 96 aa5.87□□□□□ -1.47
SCN9A-203ENST00000409672 WWC2-AS2Q96NR7 200 aa5.87□□□□□ -1.47
SCN9A-203ENST00000409672 MUC22E2RYF6 1773 aaPredicted RBP5.87□□□□□ -1.47
SCN9A-203ENST00000409672 Q6JHZ5 121 aa5.87□□□□□ -1.47
SCN9A-203ENST00000409672 A0A1B0GU69 56 aa5.86□□□□□ -1.47
SCN9A-203ENST00000409672 LINC00167Q96N53 147 aa5.86□□□□□ -1.47
SCN9A-203ENST00000409672 IGIPA6NJ69 53 aa5.86□□□□□ -1.47
SCN9A-203ENST00000409672 SPAG11AQ6PDA7 123 aa5.86□□□□□ -1.47
SCN9A-203ENST00000409672 SPINT4Q6UDR6 99 aa5.86□□□□□ -1.47
SCN9A-203ENST00000409672 SMIM29Q86T20 159 aa5.85□□□□□ -1.47
SCN9A-203ENST00000409672 APLNQ9ULZ1 77 aa5.85□□□□□ -1.47
SCN9A-203ENST00000409672 C1orf195Q5TG92 126 aa5.85□□□□□ -1.47
SCN9A-203ENST00000409672 FAM168BA1KXE4 195 aa5.84□□□□□ -1.47
SCN9A-203ENST00000409672 C2orf91Q6ZV80 131 aa5.84□□□□□ -1.47
SCN9A-203ENST00000409672 ATP5EP56381 51 aaPredicted RBP5.84□□□□□ -1.47
SCN9A-203ENST00000409672 NBDYA0A0U1RRE5 68 aa5.83□□□□□ -1.48
SCN9A-203ENST00000409672 Q6ZRP5 223 aa5.83□□□□□ -1.48
SCN9A-203ENST00000409672 TMEM254Q8TBM7 123 aa5.83□□□□□ -1.48
SCN9A-203ENST00000409672 DNAH10OSP0CZ25 163 aa5.83□□□□□ -1.48
SCN9A-203ENST00000409672 COX7CP15954 63 aa5.83□□□□□ -1.48
SCN9A-203ENST00000409672 SETD2Q9BYW2 2564 aaPredicted RBP5.83□□□□□ -1.48
SCN9A-203ENST00000409672 TRAV7A0A075B6U4 112 aa5.83□□□□□ -1.48
SCN9A-203ENST00000409672 ST20-AS1Q8NBB2 130 aa5.82□□□□□ -1.48
SCN9A-203ENST00000409672 EPM2AB3EWF7 344 aa5.82□□□□□ -1.48
SCN9A-203ENST00000409672 LINC00588Q9Y4M8 146 aa5.82□□□□□ -1.48
SCN9A-203ENST00000409672 C6orf48Q9UBA6 75 aa5.81□□□□□ -1.48
SCN9A-203ENST00000409672 IGLV6-57P01721 117 aa5.8□□□□□ -1.48
SCN9A-203ENST00000409672 Q8N2B8 174 aa5.8□□□□□ -1.48
SCN9A-203ENST00000409672 M0R2T5 61 aa5.79□□□□□ -1.48
SCN9A-203ENST00000409672 ANAPC11Q9NYG5 84 aa5.79□□□□□ -1.48
SCN9A-203ENST00000409672 A0A1B0GUV1 79 aa5.79□□□□□ -1.48
SCN9A-203ENST00000409672 SSBP3-AS1Q7Z2R9 100 aa5.79□□□□□ -1.48
SCN9A-203ENST00000409672 MKI67P46013 3256 aaKnown RBP5.79□□□□□ -1.48
SCN9A-203ENST00000409672 OBSCN-AS1Q96MR7 158 aa5.77□□□□□ -1.49
SCN9A-203ENST00000409672 LINC00476Q8WZB0 136 aa5.77□□□□□ -1.49
SCN9A-203ENST00000409672 SPTBN4Q9H254 2564 aa5.77□□□□□ -1.49
SCN9A-203ENST00000409672 KIF25-AS1Q9Y6Z4 181 aa5.77□□□□□ -1.49
SCN9A-203ENST00000409672 CELSR3Q9NYQ7 3312 aa5.77□□□□□ -1.49
SCN9A-203ENST00000409672 USP9XQ93008 2570 aaPredicted RBP5.77□□□□□ -1.49
SCN9A-203ENST00000409672 POLQO75417 2590 aa5.76□□□□□ -1.49
SCN9A-203ENST00000409672 DSCR10P59022 87 aa5.76□□□□□ -1.49
SCN9A-203ENST00000409672 CDH23Q9H251 3354 aa5.76□□□□□ -1.49
SCN9A-203ENST00000409672 LINC00846Q9NV44 126 aa5.76□□□□□ -1.49
SCN9A-203ENST00000409672 KRTAP10-11P60412 298 aa5.74□□□□□ -1.49
SCN9A-203ENST00000409672 SPATA3Q8NHX4 192 aa5.74□□□□□ -1.49
SCN9A-203ENST00000409672 AMELXQ99217 191 aa5.74□□□□□ -1.49
SCN9A-203ENST00000409672 TM2D3Q9BRN9 247 aa5.74□□□□□ -1.49
SCN9A-203ENST00000409672 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
SCN9A-203ENST00000409672 A0A0D9SG42 100 aa5.74□□□□□ -1.49
SCN9A-203ENST00000409672 FAM19A4Q96LR4 140 aa5.74□□□□□ -1.49
SCN9A-203ENST00000409672 IGLV5-37A0A075B6J1 123 aa5.73□□□□□ -1.49
SCN9A-203ENST00000409672 Q8NBF4 154 aa5.73□□□□□ -1.49
SCN9A-203ENST00000409672 PIEZO1Q92508 2521 aa5.72□□□□□ -1.49
SCN9A-203ENST00000409672 COL4A2P08572 1712 aa5.72□□□□□ -1.49
SCN9A-203ENST00000409672 A0A0G2JQZ4 141 aa5.72□□□□□ -1.49
SCN9A-203ENST00000409672 A0A1W2PNN7 141 aa5.72□□□□□ -1.49
SCN9A-203ENST00000409672 K7EQZ3 153 aa5.72□□□□□ -1.49
SCN9A-203ENST00000409672 PRRC2CQ9Y520 2896 aaKnown RBP5.72□□□□□ -1.49
SCN9A-203ENST00000409672 LINC00304Q8N9R0 145 aa5.72□□□□□ -1.49
SCN9A-203ENST00000409672 F8WDY8 70 aa5.71□□□□□ -1.5
SCN9A-203ENST00000409672 K7EIL1 84 aa5.71□□□□□ -1.5
SCN9A-203ENST00000409672 BCE1O60756 84 aa5.71□□□□□ -1.5
SCN9A-203ENST00000409672 C11orf72Q8NBR9 251 aa5.71□□□□□ -1.5
SCN9A-203ENST00000409672 BRCA2P51587 3418 aa5.71□□□□□ -1.5
SCN9A-203ENST00000409672 LAMA3Q16787 3333 aa5.71□□□□□ -1.5
SCN9A-203ENST00000409672 ANKRD11Q6UB99 2663 aaPredicted RBP5.7□□□□□ -1.5
SCN9A-203ENST00000409672 CNFNQ9BYD5 112 aa5.7□□□□□ -1.5
SCN9A-203ENST00000409672 URB1-AS1Q96HZ7 61 aa5.7□□□□□ -1.5
SCN9A-203ENST00000409672 ZNF575Q86XF7 245 aa5.69□□□□□ -1.5
SCN9A-203ENST00000409672 C9orf129Q5T035 196 aaKnown RBP5.69□□□□□ -1.5
SCN9A-203ENST00000409672 Q8NAQ8 132 aa5.69□□□□□ -1.5
SCN9A-203ENST00000409672 CR1P17927 2039 aa5.69□□□□□ -1.5
SCN9A-203ENST00000409672 USP24Q9UPU5 2620 aa5.69□□□□□ -1.5
SCN9A-203ENST00000409672 SZT2Q5T011 3432 aa5.69□□□□□ -1.5
SCN9A-203ENST00000409672 PKD1L2Q7Z442 2459 aa5.68□□□□□ -1.5
SCN9A-203ENST00000409672 CSNK1G2-AS1Q8NCQ2 148 aa5.68□□□□□ -1.5
SCN9A-203ENST00000409672 CFAP54Q96N23 3096 aa5.67□□□□□ -1.5
SCN9A-203ENST00000409672 REV3LO60673 3130 aa5.67□□□□□ -1.5
SCN9A-203ENST00000409672 RBM12B-AS1Q9P1G2 102 aa5.67□□□□□ -1.5
SCN9A-203ENST00000409672 MTORP42345 2549 aa5.67□□□□□ -1.5
SCN9A-203ENST00000409672 FASNP49327 2511 aaKnown RBP5.67□□□□□ -1.5
SCN9A-203ENST00000409672 C15orf56Q8N910 161 aa5.66□□□□□ -1.5
SCN9A-203ENST00000409672 Q6ZRX8 168 aa5.66□□□□□ -1.5
SCN9A-203ENST00000409672 TRAV22A0A0B4J277 110 aa5.66□□□□□ -1.5
SCN9A-203ENST00000409672 IGLV5-39A0A0G2JS06 123 aa5.66□□□□□ -1.5
SCN9A-203ENST00000409672 LAMA2P24043 3122 aaKnown RBP5.66□□□□□ -1.5
SCN9A-203ENST00000409672 FAM218AQ96MZ4 157 aa5.65□□□□□ -1.5
SCN9A-203ENST00000409672 DNAH14Q0VDD8 3507 aa5.65□□□□□ -1.5
SCN9A-203ENST00000409672 TP53AIP1Q9HCN2 124 aa5.65□□□□□ -1.5
SCN9A-203ENST00000409672 IGHV3OR16-9A0A0B4J2B5 98 aa5.65□□□□□ -1.51
SCN9A-203ENST00000409672 LINC01600Q96MT4 127 aa5.64□□□□□ -1.51
SCN9A-203ENST00000409672 ELOF1P60002 83 aaKnown RBP5.64□□□□□ -1.51
SCN9A-203ENST00000409672 IGLV1-50A0A075B6I6 118 aa5.63□□□□□ -1.51
SCN9A-203ENST00000409672 CXCL6P80162 114 aa5.63□□□□□ -1.51
SCN9A-203ENST00000409672 CHD8Q9HCK8 2581 aa5.63□□□□□ -1.51
SCN9A-203ENST00000409672 YPEL4Q96NS1 127 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms