RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 SERTAD4-AS1Q5TG53 156 aa10.45□□□□□ -0.74
SUMO1-208ENST00000409627 KRTAP7-1Q8IUC3 87 aa10.45□□□□□ -0.74
SUMO1-208ENST00000409627 BOD1L2Q8IYS8 172 aa10.45□□□□□ -0.74
SUMO1-208ENST00000409627 DAND5Q8N907 189 aa10.45□□□□□ -0.74
SUMO1-208ENST00000409627 IGLV5-37A0A075B6J1 123 aa10.43□□□□□ -0.74
SUMO1-208ENST00000409627 LOC107984156A0A0G2JMH3 177 aa10.43□□□□□ -0.74
SUMO1-208ENST00000409627 TMEM238C9JI98 176 aa10.43□□□□□ -0.74
SUMO1-208ENST00000409627 DLEU1O43261 78 aa10.43□□□□□ -0.74
SUMO1-208ENST00000409627 ARL17AQ8IVW1 177 aa10.43□□□□□ -0.74
SUMO1-208ENST00000409627 M0QXV9 152 aa10.42□□□□□ -0.74
SUMO1-208ENST00000409627 RPL24P83731 157 aaKnown RBP10.42□□□□□ -0.74
SUMO1-208ENST00000409627 SPANXDQ9BXN6 97 aa10.42□□□□□ -0.74
SUMO1-208ENST00000409627 SPANXCQ9NY87 97 aa10.42□□□□□ -0.74
SUMO1-208ENST00000409627 SMIM6P0DI80 62 aa10.41□□□□□ -0.74
SUMO1-208ENST00000409627 VPREB1P12018 145 aa10.41□□□□□ -0.74
SUMO1-208ENST00000409627 MIEN1Q9BRT3 115 aa10.41□□□□□ -0.74
SUMO1-208ENST00000409627 TP73-AS1Q9UF72 201 aa10.41□□□□□ -0.74
SUMO1-208ENST00000409627 C22orf24Q9Y442 160 aa10.41□□□□□ -0.74
SUMO1-208ENST00000409627 SMR3BP02814 79 aaPredicted RBP10.4□□□□□ -0.74
SUMO1-208ENST00000409627 S100A12P80511 92 aa10.4□□□□□ -0.74
SUMO1-208ENST00000409627 PHF5AQ7RTV0 110 aaKnown RBP10.4□□□□□ -0.74
SUMO1-208ENST00000409627 Q8NDZ9 215 aa10.4□□□□□ -0.74
SUMO1-208ENST00000409627 C14orf144Q96I85 54 aa10.4□□□□□ -0.74
SUMO1-208ENST00000409627 HSPG2P98160 4391 aa10.4□□□□□ -0.75
SUMO1-208ENST00000409627 SOSTDC1Q6X4U4 206 aa10.39□□□□□ -0.75
SUMO1-208ENST00000409627 Q6ZVH6 145 aa10.39□□□□□ -0.75
SUMO1-208ENST00000409627 LINC00528Q8N1L1 170 aa10.39□□□□□ -0.75
SUMO1-208ENST00000409627 NKAPP1Q8N9T2 125 aa10.39□□□□□ -0.75
SUMO1-208ENST00000409627 LINC00308Q8TCZ7 52 aa10.39□□□□□ -0.75
SUMO1-208ENST00000409627 C7orf33Q8WU49 177 aa10.39□□□□□ -0.75
SUMO1-208ENST00000409627 SLC25A34Q6PIV7 304 aa10.38□□□□□ -0.75
SUMO1-208ENST00000409627 MRPL55Q7Z7F7 128 aaKnown RBP10.38□□□□□ -0.75
SUMO1-208ENST00000409627 SPANXB1Q9NS25 103 aaPredicted RBP10.38□□□□□ -0.75
SUMO1-208ENST00000409627 NPC2P61916 151 aa10.37□□□□□ -0.75
SUMO1-208ENST00000409627 LBHQ53QV2 105 aaPredicted RBP10.37□□□□□ -0.75
SUMO1-208ENST00000409627 Q8N1X5 172 aa10.37□□□□□ -0.75
SUMO1-208ENST00000409627 PPDPFQ9H3Y8 114 aa10.37□□□□□ -0.75
SUMO1-208ENST00000409627 EIF4EBP3O60516 100 aaPredicted RBP10.36□□□□□ -0.75
SUMO1-208ENST00000409627 NDUFC2O95298 119 aa10.36□□□□□ -0.75
SUMO1-208ENST00000409627 IFITM1P13164 125 aa10.36□□□□□ -0.75
SUMO1-208ENST00000409627 COPS9Q8WXC6 57 aa10.36□□□□□ -0.75
SUMO1-208ENST00000409627 FAM229AH3BQW9 127 aa10.34□□□□□ -0.75
SUMO1-208ENST00000409627 UBE2BP63146 152 aa10.34□□□□□ -0.75
SUMO1-208ENST00000409627 LINC00167Q96N53 147 aa10.34□□□□□ -0.75
SUMO1-208ENST00000409627 HIGD1BQ9P298 99 aa10.34□□□□□ -0.75
SUMO1-208ENST00000409627 HERC2O95714 4834 aa10.33□□□□□ -0.76
SUMO1-208ENST00000409627 M0R378 163 aa10.33□□□□□ -0.76
SUMO1-208ENST00000409627 SRSF9Q13242 221 aaKnown RBP eCLIP10.33□□□□□ -0.76
SUMO1-208ENST00000409627 Q5VSD8 79 aa10.33□□□□□ -0.76
SUMO1-208ENST00000409627 KRTAP17-1Q9BYP8 105 aa10.33□□□□□ -0.76
SUMO1-208ENST00000409627 TRBV10-2A0A0K0K1G8 114 aa10.32□□□□□ -0.76
SUMO1-208ENST00000409627 NCR3O14931 201 aa10.32□□□□□ -0.76
SUMO1-208ENST00000409627 RPL37AP61513 92 aaKnown RBP10.32□□□□□ -0.76
SUMO1-208ENST00000409627 PRR3P79522 188 aaKnown RBP10.32□□□□□ -0.76
SUMO1-208ENST00000409627 C2orf91Q6ZV80 131 aa10.32□□□□□ -0.76
SUMO1-208ENST00000409627 MUSTN1Q8IVN3 82 aa10.32□□□□□ -0.76
SUMO1-208ENST00000409627 GAGE10A6NGK3 116 aa10.31□□□□□ -0.76
SUMO1-208ENST00000409627 PLA2G1BP04054 148 aaKnown RBP10.31□□□□□ -0.76
SUMO1-208ENST00000409627 KRTAP11-1Q8IUC1 163 aa10.31□□□□□ -0.76
SUMO1-208ENST00000409627 UQCR10Q9UDW1 63 aa10.3□□□□□ -0.76
SUMO1-208ENST00000409627 PSORS1C2Q9UIG4 136 aa10.3□□□□□ -0.76
SUMO1-208ENST00000409627 IGLV1-50A0A075B6I6 118 aa10.29□□□□□ -0.76
SUMO1-208ENST00000409627 RPL37AP8A6NKH3 93 aa10.29□□□□□ -0.76
SUMO1-208ENST00000409627 KRTAP10-4P60372 401 aaPredicted RBP10.29□□□□□ -0.76
SUMO1-208ENST00000409627 HIST1H4GQ99525 98 aa10.29□□□□□ -0.76
SUMO1-208ENST00000409627 IGKV2-28A0A075B6P5 120 aa10.27□□□□□ -0.77
SUMO1-208ENST00000409627 IGKV2D-28P01615 120 aa10.27□□□□□ -0.77
SUMO1-208ENST00000409627 LINC00518Q8N0U6 118 aa10.27□□□□□ -0.77
SUMO1-208ENST00000409627 C12orf57Q99622 126 aa10.27□□□□□ -0.77
SUMO1-208ENST00000409627 FAT1Q14517 4588 aa10.27□□□□□ -0.77
SUMO1-208ENST00000409627 TAL2Q16559 108 aa10.26□□□□□ -0.77
SUMO1-208ENST00000409627 TRBV10-3A0A0K0K1G6 114 aa10.25□□□□□ -0.77
SUMO1-208ENST00000409627 C1orf137Q5JT78 98 aa10.25□□□□□ -0.77
SUMO1-208ENST00000409627 IGLV6-57P01721 117 aa10.24□□□□□ -0.77
SUMO1-208ENST00000409627 DDTP30046 118 aa10.24□□□□□ -0.77
SUMO1-208ENST00000409627 S100A7L2Q5SY68 101 aa10.24□□□□□ -0.77
SUMO1-208ENST00000409627 PRO1933Q9H354 126 aa10.24□□□□□ -0.77
SUMO1-208ENST00000409627 VPS13BQ7Z7G8 4022 aa10.23□□□□□ -0.77
SUMO1-208ENST00000409627 PRYO14603 147 aa10.23□□□□□ -0.77
SUMO1-208ENST00000409627 A4D1N5 150 aa10.22□□□□□ -0.77
SUMO1-208ENST00000409627 REG3GQ6UW15 175 aa10.22□□□□□ -0.77
SUMO1-208ENST00000409627 LINC00337Q8N6G1 96 aa10.22□□□□□ -0.77
SUMO1-208ENST00000409627 KCNQ1DNQ9H478 68 aa10.22□□□□□ -0.77
SUMO1-208ENST00000409627 HNRNPA3P51991 378 aaKnown RBP10.21□□□□□ -0.77
SUMO1-208ENST00000409627 HSD52Q0P140 79 aa10.21□□□□□ -0.77
SUMO1-208ENST00000409627 TMEM126AQ9H061 195 aa10.21□□□□□ -0.77
SUMO1-208ENST00000409627 BCE1O60756 84 aa10.2□□□□□ -0.78
SUMO1-208ENST00000409627 IGLV7-43P04211 117 aa10.2□□□□□ -0.78
SUMO1-208ENST00000409627 CEND1Q8N111 149 aa10.2□□□□□ -0.78
SUMO1-208ENST00000409627 OR13C6PQ8NH95 151 aa10.2□□□□□ -0.78
SUMO1-208ENST00000409627 KRTAP4-5Q9BYR2 181 aa10.2□□□□□ -0.78
SUMO1-208ENST00000409627 CBY1Q9Y3M2 126 aa10.2□□□□□ -0.78
SUMO1-208ENST00000409627 TRAV13-2A0A0B4J235 113 aa10.19□□□□□ -0.78
SUMO1-208ENST00000409627 SPRR1AP35321 89 aa10.19□□□□□ -0.78
SUMO1-208ENST00000409627 TRAV23DV6A0A075B6W5 121 aa10.18□□□□□ -0.78
SUMO1-208ENST00000409627 TSTD3H0UI37 97 aa10.18□□□□□ -0.78
SUMO1-208ENST00000409627 TMEM238LA0A1B0GVL6 79 aa10.16□□□□□ -0.78
SUMO1-208ENST00000409627 A6NDN8 102 aa10.16□□□□□ -0.78
SUMO1-208ENST00000409627 A6NJY4 79 aa10.16□□□□□ -0.78
SUMO1-208ENST00000409627 KRTAP4-16G5E9R7 235 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms