RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 LINC00313P59037 77 aa9.84□□□□□ -0.83
AFF3-202ENST00000409236 LINC01546A6NGU7 62 aa9.84□□□□□ -0.83
AFF3-202ENST00000409236 MIR22HGQ0VDD5 57 aa9.84□□□□□ -0.83
AFF3-202ENST00000409236 LINC01554Q52M75 96 aa9.84□□□□□ -0.83
AFF3-202ENST00000409236 IGLV1-40P01703 118 aa9.83□□□□□ -0.84
AFF3-202ENST00000409236 COL4A3Q01955 1670 aa9.83□□□□□ -0.84
AFF3-202ENST00000409236 Q6ZQT0 140 aa9.81□□□□□ -0.84
AFF3-202ENST00000409236 COA5Q86WW8 74 aa9.81□□□□□ -0.84
AFF3-202ENST00000409236 C11orf71Q6IPW1 123 aa9.81□□□□□ -0.84
AFF3-202ENST00000409236 COX8CQ7Z4L0 72 aa9.81□□□□□ -0.84
AFF3-202ENST00000409236 USP9YO00507 2555 aaPredicted RBP9.81□□□□□ -0.84
AFF3-202ENST00000409236 FASNP49327 2511 aaKnown RBP9.81□□□□□ -0.84
AFF3-202ENST00000409236 KIAA0087Q14695 138 aa9.81□□□□□ -0.84
AFF3-202ENST00000409236 A8MTW9 85 aa9.8□□□□□ -0.84
AFF3-202ENST00000409236 PRR15Q8IV56 129 aa9.8□□□□□ -0.84
AFF3-202ENST00000409236 EDN2P20800 178 aa9.79□□□□□ -0.84
AFF3-202ENST00000409236 TM2D3Q9BRN9 247 aa9.79□□□□□ -0.84
AFF3-202ENST00000409236 IGLV4-60A0A075B6I1 120 aa9.78□□□□□ -0.84
AFF3-202ENST00000409236 Q6ZPA2 131 aa9.77□□□□□ -0.84
AFF3-202ENST00000409236 EPM2AB3EWF7 344 aa9.77□□□□□ -0.85
AFF3-202ENST00000409236 FAM229AH3BQW9 127 aa9.77□□□□□ -0.85
AFF3-202ENST00000409236 Q8NBF4 154 aa9.77□□□□□ -0.85
AFF3-202ENST00000409236 FHL2Q14192 279 aa9.77□□□□□ -0.85
AFF3-202ENST00000409236 CDC42SE1Q9NRR8 79 aa9.77□□□□□ -0.85
AFF3-202ENST00000409236 IGLV5-39A0A0G2JS06 123 aa9.77□□□□□ -0.85
AFF3-202ENST00000409236 FAM19A4Q96LR4 140 aa9.76□□□□□ -0.85
AFF3-202ENST00000409236 URB1-AS1Q96HZ7 61 aa9.76□□□□□ -0.85
AFF3-202ENST00000409236 C1orf229Q6ZS94 237 aaPredicted RBP9.76□□□□□ -0.85
AFF3-202ENST00000409236 SPACA4Q8TDM5 124 aa9.74□□□□□ -0.85
AFF3-202ENST00000409236 LY6G6DO95868 133 aa9.74□□□□□ -0.85
AFF3-202ENST00000409236 SMCR5Q8TEV8 140 aa9.74□□□□□ -0.85
AFF3-202ENST00000409236 APLNQ9ULZ1 77 aa9.73□□□□□ -0.85
AFF3-202ENST00000409236 A8MWP4 228 aa9.73□□□□□ -0.85
AFF3-202ENST00000409236 Q6ZRX8 168 aa9.73□□□□□ -0.85
AFF3-202ENST00000409236 C1orf134Q5TEV5 83 aa9.72□□□□□ -0.85
AFF3-202ENST00000409236 TRBV7-4A0A0J9YYF1 115 aa9.72□□□□□ -0.85
AFF3-202ENST00000409236 C22orf24Q9Y442 160 aa9.72□□□□□ -0.85
AFF3-202ENST00000409236 INAFM1C9JVW0 142 aa9.71□□□□□ -0.85
AFF3-202ENST00000409236 KLKP1Q107X0 134 aa9.7□□□□□ -0.86
AFF3-202ENST00000409236 ZNF580Q9UK33 172 aa9.7□□□□□ -0.86
AFF3-202ENST00000409236 A8MUN3 132 aa9.7□□□□□ -0.86
AFF3-202ENST00000409236 LINC01006Q8NI28 216 aa9.7□□□□□ -0.86
AFF3-202ENST00000409236 PRO0461Q9UI25 63 aa9.69□□□□□ -0.86
AFF3-202ENST00000409236 PLA2G5P39877 138 aa9.69□□□□□ -0.86
AFF3-202ENST00000409236 A0A096LNJ9 63 aa9.68□□□□□ -0.86
AFF3-202ENST00000409236 C10orf99Q6UWK7 81 aa9.68□□□□□ -0.86
AFF3-202ENST00000409236 LYPD5Q6UWN5 251 aa9.68□□□□□ -0.86
AFF3-202ENST00000409236 Q6ZRU5 148 aa9.68□□□□□ -0.86
AFF3-202ENST00000409236 LINC00476Q8WZB0 136 aa9.68□□□□□ -0.86
AFF3-202ENST00000409236 CRIP3Q6Q6R5 217 aa9.67□□□□□ -0.86
AFF3-202ENST00000409236 BRI3O95415 125 aa9.66□□□□□ -0.86
AFF3-202ENST00000409236 IGLV1-51P01701 117 aa9.65□□□□□ -0.86
AFF3-202ENST00000409236 EPG5Q9HCE0 2579 aa9.65□□□□□ -0.86
AFF3-202ENST00000409236 PRRC2CQ9Y520 2896 aaKnown RBP9.65□□□□□ -0.86
AFF3-202ENST00000409236 IGLV5-45A0A087WSX0 123 aa9.65□□□□□ -0.87
AFF3-202ENST00000409236 ODF3L2Q3SX64 289 aa9.64□□□□□ -0.87
AFF3-202ENST00000409236 BPTFQ12830 3046 aa9.64□□□□□ -0.87
AFF3-202ENST00000409236 SMCPP49901 116 aaPredicted RBP9.64□□□□□ -0.87
AFF3-202ENST00000409236 C18orf65Q6ZTR6 163 aa9.63□□□□□ -0.87
AFF3-202ENST00000409236 Q8NA96 180 aa9.63□□□□□ -0.87
AFF3-202ENST00000409236 KIF25-AS1Q9Y6Z4 181 aa9.63□□□□□ -0.87
AFF3-202ENST00000409236 LINC00483Q53H64 154 aa9.62□□□□□ -0.87
AFF3-202ENST00000409236 C9orf129Q5T035 196 aaKnown RBP9.62□□□□□ -0.87
AFF3-202ENST00000409236 C19orf84I3L1E1 186 aa9.62□□□□□ -0.87
AFF3-202ENST00000409236 LINC00336Q6ZUF6 198 aa9.62□□□□□ -0.87
AFF3-202ENST00000409236 FAM218AQ96MZ4 157 aa9.61□□□□□ -0.87
AFF3-202ENST00000409236 CSNK1G2-AS1Q8NCQ2 148 aa9.61□□□□□ -0.87
AFF3-202ENST00000409236 Q96NJ1 140 aa9.61□□□□□ -0.87
AFF3-202ENST00000409236 A0A0A0MQY5 61 aa9.6□□□□□ -0.87
AFF3-202ENST00000409236 IGHV3OR16-9A0A0B4J2B5 98 aa9.6□□□□□ -0.87
AFF3-202ENST00000409236 PRO3102Q9H379 93 aa9.6□□□□□ -0.87
AFF3-202ENST00000409236 LINC00167Q96N53 147 aa9.6□□□□□ -0.87
AFF3-202ENST00000409236 SPANXA2-OT1Q8N9U9 137 aa9.59□□□□□ -0.87
AFF3-202ENST00000409236 Q6ZSN1 163 aa9.58□□□□□ -0.88
AFF3-202ENST00000409236 MRPL34Q9BQ48 92 aaKnown RBP9.58□□□□□ -0.88
AFF3-202ENST00000409236 Q1T7F1 81 aa9.57□□□□□ -0.88
AFF3-202ENST00000409236 TYMSOSQ8TAI1 123 aa9.57□□□□□ -0.88
AFF3-202ENST00000409236 C16orf90A8MZG2 172 aa9.56□□□□□ -0.88
AFF3-202ENST00000409236 Q6ZRP5 223 aa9.56□□□□□ -0.88
AFF3-202ENST00000409236 K7EQZ3 153 aa9.55□□□□□ -0.88
AFF3-202ENST00000409236 H3BS24 57 aa9.53□□□□□ -0.88
AFF3-202ENST00000409236 IGLV6-57P01721 117 aa9.52□□□□□ -0.89
AFF3-202ENST00000409236 RPL37AP61513 92 aaKnown RBP9.52□□□□□ -0.89
AFF3-202ENST00000409236 ST20-AS1Q8NBB2 130 aa9.52□□□□□ -0.89
AFF3-202ENST00000409236 WIPF1O43516 503 aa9.51□□□□□ -0.89
AFF3-202ENST00000409236 H3BNG1 76 aa9.51□□□□□ -0.89
AFF3-202ENST00000409236 C8orf17Q9NRJ1 99 aa9.51□□□□□ -0.89
AFF3-202ENST00000409236 H7BZZ5 65 aa9.5□□□□□ -0.89
AFF3-202ENST00000409236 C16orf95Q9H693 158 aa9.5□□□□□ -0.89
AFF3-202ENST00000409236 GVQW2A0A096LPI5 108 aaPredicted RBP9.48□□□□□ -0.89
AFF3-202ENST00000409236 AVPP01185 164 aa9.48□□□□□ -0.89
AFF3-202ENST00000409236 CEP295Q9C0D2 2601 aa9.45□□□□□ -0.9
AFF3-202ENST00000409236 COX6B2Q6YFQ2 88 aa9.44□□□□□ -0.9
AFF3-202ENST00000409236 A0A1B0GVX0 72 aa9.44□□□□□ -0.9
AFF3-202ENST00000409236 A0A1W2PNU3 283 aaPredicted RBP9.44□□□□□ -0.9
AFF3-202ENST00000409236 FHL3Q13643 280 aa9.44□□□□□ -0.9
AFF3-202ENST00000409236 DMAC1Q96GE9 116 aa9.43□□□□□ -0.9
AFF3-202ENST00000409236 FAM104AQ969W3 186 aa9.42□□□□□ -0.9
AFF3-202ENST00000409236 RBM12B-AS1Q9P1G2 102 aa9.42□□□□□ -0.9
AFF3-202ENST00000409236 CHTF8P0CG12 524 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms