RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 C4orf48Q5BLP8 95 aa7.24□□□□□ -1.25
TUBA3D-202ENST00000409047 Q8N377 158 aa7.24□□□□□ -1.25
TUBA3D-202ENST00000409047 ANAPC16Q96DE5 110 aa7.24□□□□□ -1.25
TUBA3D-202ENST00000409047 IGLC3P0DOY3 106 aa7.23□□□□□ -1.25
TUBA3D-202ENST00000409047 COX17Q14061 63 aa7.23□□□□□ -1.25
TUBA3D-202ENST00000409047 KRTAP4-16G5E9R7 235 aaPredicted RBP7.22□□□□□ -1.25
TUBA3D-202ENST00000409047 ZNF22P17026 224 aaPredicted RBP7.22□□□□□ -1.25
TUBA3D-202ENST00000409047 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
TUBA3D-202ENST00000409047 SPRR1AP35321 89 aa7.22□□□□□ -1.25
TUBA3D-202ENST00000409047 LINC00483Q53H64 154 aa7.22□□□□□ -1.25
TUBA3D-202ENST00000409047 ZNF625Q96I27 306 aaPredicted RBP7.22□□□□□ -1.25
TUBA3D-202ENST00000409047 H3BRM9 83 aa7.21□□□□□ -1.26
TUBA3D-202ENST00000409047 MT-ND4LP03901 98 aa7.21□□□□□ -1.26
TUBA3D-202ENST00000409047 ZNF706Q9Y5V0 76 aaPredicted RBP7.21□□□□□ -1.26
TUBA3D-202ENST00000409047 RPS29P62273 56 aaKnown RBP7.2□□□□□ -1.26
TUBA3D-202ENST00000409047 SMCR5Q8TEV8 140 aa7.2□□□□□ -1.26
TUBA3D-202ENST00000409047 FLGP20930 4061 aaPredicted RBP7.19□□□□□ -1.26
TUBA3D-202ENST00000409047 A0A096LNJ9 63 aa7.19□□□□□ -1.26
TUBA3D-202ENST00000409047 LINC01549A6NIU2 74 aa7.19□□□□□ -1.26
TUBA3D-202ENST00000409047 KRTAP10-6P60371 365 aaPredicted RBP7.18□□□□□ -1.26
TUBA3D-202ENST00000409047 PRYO14603 147 aa7.17□□□□□ -1.26
TUBA3D-202ENST00000409047 KCNQ1DNQ9H478 68 aa7.17□□□□□ -1.26
TUBA3D-202ENST00000409047 ERC2-IT1O76042 136 aa7.16□□□□□ -1.26
TUBA3D-202ENST00000409047 MOBPQ13875 183 aa7.16□□□□□ -1.26
TUBA3D-202ENST00000409047 A0A1B0GVG6 124 aa7.15□□□□□ -1.26
TUBA3D-202ENST00000409047 C11orf86A6NJI1 115 aa7.15□□□□□ -1.26
TUBA3D-202ENST00000409047 CFC1BP0CG36 223 aa7.15□□□□□ -1.26
TUBA3D-202ENST00000409047 FAM19A2Q8N3H0 131 aa7.15□□□□□ -1.26
TUBA3D-202ENST00000409047 NDUFA12Q9UI09 145 aa7.15□□□□□ -1.26
TUBA3D-202ENST00000409047 SLC25A20O43772 301 aa7.14□□□□□ -1.27
TUBA3D-202ENST00000409047 GAGE2AQ6NT46 116 aa7.14□□□□□ -1.27
TUBA3D-202ENST00000409047 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
TUBA3D-202ENST00000409047 URB1-AS1Q96HZ7 61 aa7.14□□□□□ -1.27
TUBA3D-202ENST00000409047 IGLV9-49A0A0B4J1Y8 123 aa7.13□□□□□ -1.27
TUBA3D-202ENST00000409047 A0A0U1RRA0 63 aa7.13□□□□□ -1.27
TUBA3D-202ENST00000409047 LINC00158P58513 81 aa7.13□□□□□ -1.27
TUBA3D-202ENST00000409047 B5MCH6 92 aa7.12□□□□□ -1.27
TUBA3D-202ENST00000409047 NCR3O14931 201 aa7.12□□□□□ -1.27
TUBA3D-202ENST00000409047 PCOTHQ58A44 107 aa7.12□□□□□ -1.27
TUBA3D-202ENST00000409047 SFTA2Q6UW10 78 aa7.12□□□□□ -1.27
TUBA3D-202ENST00000409047 TRAV9-1A0A075B6T8 112 aa7.11□□□□□ -1.27
TUBA3D-202ENST00000409047 TRBV10-3A0A0K0K1G6 114 aa7.11□□□□□ -1.27
TUBA3D-202ENST00000409047 NDUFA6P56556 154 aa7.11□□□□□ -1.27
TUBA3D-202ENST00000409047 FA2HQ7L5A8 372 aa7.11□□□□□ -1.27
TUBA3D-202ENST00000409047 Q9BRP9 147 aa7.11□□□□□ -1.27
TUBA3D-202ENST00000409047 ETDCA0A1B0GVM5 59 aa7.1□□□□□ -1.27
TUBA3D-202ENST00000409047 SMIM13P0DJ93 91 aa7.1□□□□□ -1.27
TUBA3D-202ENST00000409047 BOD1L2Q8IYS8 172 aa7.1□□□□□ -1.27
TUBA3D-202ENST00000409047 IGLV8-61A0A075B6I0 122 aa7.09□□□□□ -1.27
TUBA3D-202ENST00000409047 TMEM170BQ5T4T1 132 aa7.09□□□□□ -1.27
TUBA3D-202ENST00000409047 SMCO4Q9NRQ5 59 aa7.09□□□□□ -1.27
TUBA3D-202ENST00000409047 TMEM223A0PJW6 202 aa7.07□□□□□ -1.28
TUBA3D-202ENST00000409047 PMCHL1Q16048 86 aa7.07□□□□□ -1.28
TUBA3D-202ENST00000409047 BAGE3Q86Y29 109 aa7.07□□□□□ -1.28
TUBA3D-202ENST00000409047 MIR7-3HGQ8N6C7 128 aa7.07□□□□□ -1.28
TUBA3D-202ENST00000409047 HBDP02042 147 aa7.05□□□□□ -1.28
TUBA3D-202ENST00000409047 Q6ZRX8 168 aa7.05□□□□□ -1.28
TUBA3D-202ENST00000409047 C18orf32Q8TCD1 76 aa7.05□□□□□ -1.28
TUBA3D-202ENST00000409047 LINC00614P0C842 121 aa7.04□□□□□ -1.28
TUBA3D-202ENST00000409047 FABP9Q0Z7S8 132 aa7.04□□□□□ -1.28
TUBA3D-202ENST00000409047 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.03□□□□□ -1.28
TUBA3D-202ENST00000409047 LOC107984156A0A0G2JMH3 177 aa7.02□□□□□ -1.29
TUBA3D-202ENST00000409047 C9orf92A6NGG3 77 aa7.02□□□□□ -1.29
TUBA3D-202ENST00000409047 KRTAP9-7A8MTY7 169 aa7.02□□□□□ -1.29
TUBA3D-202ENST00000409047 ARL17AQ8IVW1 177 aa7.02□□□□□ -1.29
TUBA3D-202ENST00000409047 CHTOPQ9Y3Y2 248 aaKnown RBP7.02□□□□□ -1.29
TUBA3D-202ENST00000409047 COX19Q49B96 90 aa7.01□□□□□ -1.29
TUBA3D-202ENST00000409047 MEIG1Q5JSS6 88 aa7.01□□□□□ -1.29
TUBA3D-202ENST00000409047 C9orf153Q5TBE3 101 aa7.01□□□□□ -1.29
TUBA3D-202ENST00000409047 ST20-AS1Q8NBB2 130 aa7.01□□□□□ -1.29
TUBA3D-202ENST00000409047 DDTP30046 118 aa7□□□□□ -1.29
TUBA3D-202ENST00000409047 SSPOA2VEC9 5147 aa7□□□□□ -1.29
TUBA3D-202ENST00000409047 TRBV10-2A0A0K0K1G8 114 aa6.99□□□□□ -1.29
TUBA3D-202ENST00000409047 TMEM218A2RU14 115 aa6.99□□□□□ -1.29
TUBA3D-202ENST00000409047 ATP6V1G1O75348 118 aa6.99□□□□□ -1.29
TUBA3D-202ENST00000409047 S100PP25815 95 aa6.99□□□□□ -1.29
TUBA3D-202ENST00000409047 HERV-K104P63124 156 aa6.99□□□□□ -1.29
TUBA3D-202ENST00000409047 IGLV6-57P01721 117 aa6.98□□□□□ -1.29
TUBA3D-202ENST00000409047 TSPEAR-AS2P59090 65 aa6.98□□□□□ -1.29
TUBA3D-202ENST00000409047 SEC11CQ9BY50 192 aa6.98□□□□□ -1.29
TUBA3D-202ENST00000409047 TRAV12-1A0A0B4J245 112 aa6.97□□□□□ -1.29
TUBA3D-202ENST00000409047 M0R2T5 61 aa6.97□□□□□ -1.29
TUBA3D-202ENST00000409047 CLLU1Q5K131 121 aa6.96□□□□□ -1.3
TUBA3D-202ENST00000409047 RPS10P5Q9NQ39 176 aa6.96□□□□□ -1.3
TUBA3D-202ENST00000409047 USH2AO75445 5202 aa6.96□□□□□ -1.3
TUBA3D-202ENST00000409047 LINC00587B1AMM8 73 aa6.95□□□□□ -1.3
TUBA3D-202ENST00000409047 SPRR1BP22528 89 aa6.95□□□□□ -1.3
TUBA3D-202ENST00000409047 S100A12P80511 92 aa6.95□□□□□ -1.3
TUBA3D-202ENST00000409047 HRCT1Q6UXD1 115 aa6.95□□□□□ -1.3
TUBA3D-202ENST00000409047 MYMXA0A1B0GTQ4 84 aa6.94□□□□□ -1.3
TUBA3D-202ENST00000409047 EIF4EBP3O60516 100 aaPredicted RBP6.94□□□□□ -1.3
TUBA3D-202ENST00000409047 UQCC3Q6UW78 93 aa6.94□□□□□ -1.3
TUBA3D-202ENST00000409047 IFI27L1Q96BM0 104 aa6.94□□□□□ -1.3
TUBA3D-202ENST00000409047 LIMD2Q9BT23 127 aa6.94□□□□□ -1.3
TUBA3D-202ENST00000409047 SPANXB1Q9NS25 103 aaPredicted RBP6.94□□□□□ -1.3
TUBA3D-202ENST00000409047 MAP1LC3CQ9BXW4 147 aa6.93□□□□□ -1.3
TUBA3D-202ENST00000409047 TRAPPC1Q9Y5R8 145 aa6.93□□□□□ -1.3
TUBA3D-202ENST00000409047 TRAV23DV6A0A075B6W5 121 aa6.92□□□□□ -1.3
TUBA3D-202ENST00000409047 C5orf52A6NGY3 159 aa6.92□□□□□ -1.3
TUBA3D-202ENST00000409047 NDUFC2O95298 119 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms