RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 RBM12B-AS1Q9P1G2 102 aa6.63□□□□□ -1.35
NIF3L1-202ENST00000409020 TRIAP1O43715 76 aa6.62□□□□□ -1.35
NIF3L1-202ENST00000409020 KLKP1Q107X0 134 aa6.62□□□□□ -1.35
NIF3L1-202ENST00000409020 LAGE3Q14657 143 aa6.62□□□□□ -1.35
NIF3L1-202ENST00000409020 C6orf223Q8N319 242 aa6.62□□□□□ -1.35
NIF3L1-202ENST00000409020 GNRH2O43555 120 aa6.61□□□□□ -1.35
NIF3L1-202ENST00000409020 C8orf49Q96NF6 230 aa6.61□□□□□ -1.35
NIF3L1-202ENST00000409020 ICOSQ9Y6W8 199 aa6.61□□□□□ -1.35
NIF3L1-202ENST00000409020 HERC1Q15751 4861 aa6.61□□□□□ -1.35
NIF3L1-202ENST00000409020 H3BNG1 76 aa6.61□□□□□ -1.35
NIF3L1-202ENST00000409020 ATP5EP2Q5VTU8 51 aa6.61□□□□□ -1.35
NIF3L1-202ENST00000409020 LYPD5Q6UWN5 251 aa6.61□□□□□ -1.35
NIF3L1-202ENST00000409020 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
NIF3L1-202ENST00000409020 MED14OSP0DP75 135 aa6.6□□□□□ -1.35
NIF3L1-202ENST00000409020 ZNF80P51504 273 aaPredicted RBP6.6□□□□□ -1.35
NIF3L1-202ENST00000409020 KTN1-AS1Q86SY8 53 aa6.6□□□□□ -1.35
NIF3L1-202ENST00000409020 C11orf21Q9P2W6 132 aa6.6□□□□□ -1.35
NIF3L1-202ENST00000409020 UBE2D4Q9Y2X8 147 aa6.6□□□□□ -1.35
NIF3L1-202ENST00000409020 MYCBP2O75592 4640 aa6.59□□□□□ -1.35
NIF3L1-202ENST00000409020 NDUFS5O43920 106 aa6.59□□□□□ -1.35
NIF3L1-202ENST00000409020 RBM3P98179 157 aaKnown RBP6.59□□□□□ -1.35
NIF3L1-202ENST00000409020 SS18Q15532 418 aa6.59□□□□□ -1.35
NIF3L1-202ENST00000409020 TMEM75Q8N9X5 138 aa6.59□□□□□ -1.35
NIF3L1-202ENST00000409020 TRAV7A0A075B6U4 112 aa6.58□□□□□ -1.36
NIF3L1-202ENST00000409020 IGHV3-16A0A0C4DH30 117 aa6.58□□□□□ -1.36
NIF3L1-202ENST00000409020 NXPH4O95158 308 aa6.58□□□□□ -1.36
NIF3L1-202ENST00000409020 IGLV2-11P01706 119 aa6.58□□□□□ -1.36
NIF3L1-202ENST00000409020 PRO0255Q9UI72 69 aa6.58□□□□□ -1.36
NIF3L1-202ENST00000409020 LENEPQ9Y5L5 61 aa6.58□□□□□ -1.36
NIF3L1-202ENST00000409020 LOC100131303A0A0U1RQF7 123 aa6.58□□□□□ -1.36
NIF3L1-202ENST00000409020 K7EQD1 137 aa6.58□□□□□ -1.36
NIF3L1-202ENST00000409020 S100A7L2Q5SY68 101 aa6.58□□□□□ -1.36
NIF3L1-202ENST00000409020 LYZL1Q6UWQ5 148 aa6.58□□□□□ -1.36
NIF3L1-202ENST00000409020 KRTAP4-5Q9BYR2 181 aa6.58□□□□□ -1.36
NIF3L1-202ENST00000409020 LINC00474Q9P2X8 69 aa6.58□□□□□ -1.36
NIF3L1-202ENST00000409020 TRAV13-2A0A0B4J235 113 aa6.57□□□□□ -1.36
NIF3L1-202ENST00000409020 TRAV21A0A0B4J279 112 aa6.57□□□□□ -1.36
NIF3L1-202ENST00000409020 TRBV27A0A0K0K1C4 114 aa6.57□□□□□ -1.36
NIF3L1-202ENST00000409020 FUSP35637 526 aaKnown RBP eCLIP6.57□□□□□ -1.36
NIF3L1-202ENST00000409020 LINC00315P59091 139 aa6.57□□□□□ -1.36
NIF3L1-202ENST00000409020 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
NIF3L1-202ENST00000409020 C20orf197Q8N268 126 aa6.57□□□□□ -1.36
NIF3L1-202ENST00000409020 RNF185Q96GF1 192 aa6.57□□□□□ -1.36
NIF3L1-202ENST00000409020 TRGV4A0A0C4DH28 118 aa6.56□□□□□ -1.36
NIF3L1-202ENST00000409020 TRBV10-3A0A0K0K1G6 114 aa6.56□□□□□ -1.36
NIF3L1-202ENST00000409020 SDHAF1A6NFY7 115 aa6.56□□□□□ -1.36
NIF3L1-202ENST00000409020 C16orf90A8MZG2 172 aa6.56□□□□□ -1.36
NIF3L1-202ENST00000409020 PRSS2P07478 247 aa6.56□□□□□ -1.36
NIF3L1-202ENST00000409020 GYPEP15421 78 aa6.56□□□□□ -1.36
NIF3L1-202ENST00000409020 PRNTQ86SH4 94 aa6.56□□□□□ -1.36
NIF3L1-202ENST00000409020 CNFNQ9BYD5 112 aa6.56□□□□□ -1.36
NIF3L1-202ENST00000409020 H7C2G1 150 aa6.55□□□□□ -1.36
NIF3L1-202ENST00000409020 Q6ZRN7 208 aaPredicted RBP6.55□□□□□ -1.36
NIF3L1-202ENST00000409020 WFDC10BQ8IUB3 73 aa6.55□□□□□ -1.36
NIF3L1-202ENST00000409020 TOMM6Q96B49 74 aa6.55□□□□□ -1.36
NIF3L1-202ENST00000409020 C11orf86A6NJI1 115 aa6.55□□□□□ -1.36
NIF3L1-202ENST00000409020 SMKR1H3BMG3 65 aa6.55□□□□□ -1.36
NIF3L1-202ENST00000409020 COX8CQ7Z4L0 72 aa6.55□□□□□ -1.36
NIF3L1-202ENST00000409020 SCGB3A1Q96QR1 104 aa6.55□□□□□ -1.36
NIF3L1-202ENST00000409020 IGHV3-73A0A0B4J1V6 119 aa6.54□□□□□ -1.36
NIF3L1-202ENST00000409020 MUSTN1Q8IVN3 82 aa6.54□□□□□ -1.36
NIF3L1-202ENST00000409020 A0A087WWL8 130 aa6.53□□□□□ -1.36
NIF3L1-202ENST00000409020 IGKV3D-20A0A0C4DH25 116 aa6.53□□□□□ -1.36
NIF3L1-202ENST00000409020 RNASE3P12724 160 aaKnown RBP6.53□□□□□ -1.36
NIF3L1-202ENST00000409020 ZNF876PQ49A33 203 aa6.53□□□□□ -1.36
NIF3L1-202ENST00000409020 AMELXQ99217 191 aa6.53□□□□□ -1.36
NIF3L1-202ENST00000409020 PLA2G2DQ9UNK4 145 aa6.53□□□□□ -1.36
NIF3L1-202ENST00000409020 TRAV8-3A0A0A6YYJ7 113 aa6.52□□□□□ -1.37
NIF3L1-202ENST00000409020 CRIP1P50238 77 aa6.52□□□□□ -1.37
NIF3L1-202ENST00000409020 CIRBPQ14011 172 aaKnown RBP6.52□□□□□ -1.37
NIF3L1-202ENST00000409020 Q6ZSN1 163 aa6.52□□□□□ -1.37
NIF3L1-202ENST00000409020 SRRM2Q9UQ35 2752 aaKnown RBP6.52□□□□□ -1.37
NIF3L1-202ENST00000409020 C8orf87E5RJ46 101 aa6.52□□□□□ -1.37
NIF3L1-202ENST00000409020 I3L3M4 83 aa6.52□□□□□ -1.37
NIF3L1-202ENST00000409020 LEPROTO15243 131 aa6.52□□□□□ -1.37
NIF3L1-202ENST00000409020 DNAH10OSP0CZ25 163 aa6.52□□□□□ -1.37
NIF3L1-202ENST00000409020 NRACQ8N912 160 aa6.52□□□□□ -1.37
NIF3L1-202ENST00000409020 M0R378 163 aa6.51□□□□□ -1.37
NIF3L1-202ENST00000409020 DNAL4O96015 105 aa6.51□□□□□ -1.37
NIF3L1-202ENST00000409020 Q1T7F1 81 aa6.51□□□□□ -1.37
NIF3L1-202ENST00000409020 SERTAD4-AS1Q5TG53 156 aa6.51□□□□□ -1.37
NIF3L1-202ENST00000409020 CLEC2BQ92478 149 aa6.51□□□□□ -1.37
NIF3L1-202ENST00000409020 UBE2L6O14933 153 aa6.5□□□□□ -1.37
NIF3L1-202ENST00000409020 IGKV3D-7A0A0C4DH55 119 aa6.49□□□□□ -1.37
NIF3L1-202ENST00000409020 F8WEM9 126 aa6.49□□□□□ -1.37
NIF3L1-202ENST00000409020 COX7A2LO14548 114 aa6.49□□□□□ -1.37
NIF3L1-202ENST00000409020 BAALC-AS2P0C853 105 aa6.49□□□□□ -1.37
NIF3L1-202ENST00000409020 Q8N3U1 123 aa6.49□□□□□ -1.37
NIF3L1-202ENST00000409020 IGIPA6NJ69 53 aa6.49□□□□□ -1.37
NIF3L1-202ENST00000409020 SH2D1AO60880 128 aa6.49□□□□□ -1.37
NIF3L1-202ENST00000409020 CDK2AP2O75956 126 aa6.49□□□□□ -1.37
NIF3L1-202ENST00000409020 UBE2BP63146 152 aa6.49□□□□□ -1.37
NIF3L1-202ENST00000409020 Q6ZVQ6 151 aa6.49□□□□□ -1.37
NIF3L1-202ENST00000409020 PHF5AQ7RTV0 110 aaKnown RBP6.49□□□□□ -1.37
NIF3L1-202ENST00000409020 C14orf178Q8N769 122 aaPredicted RBP6.49□□□□□ -1.37
NIF3L1-202ENST00000409020 PRR26Q8N8Z3 221 aa6.49□□□□□ -1.37
NIF3L1-202ENST00000409020 SMIM2Q9BVW6 85 aa6.48□□□□□ -1.37
NIF3L1-202ENST00000409020 A0A087WTM6 91 aa6.47□□□□□ -1.37
NIF3L1-202ENST00000409020 A0A087WVE0 104 aa6.47□□□□□ -1.37
NIF3L1-202ENST00000409020 TRBV6-4A0A1B0GX49 114 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms