RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 ATP5LO75964 103 aa7.18□□□□□ -1.26
APOBEC3B-204ENST00000407298 TRGC2P03986 189 aa7.17□□□□□ -1.26
APOBEC3B-204ENST00000407298 BAGE3Q86Y29 109 aa7.17□□□□□ -1.26
APOBEC3B-204ENST00000407298 IGLV7-46A0A075B6I9 117 aa7.16□□□□□ -1.26
APOBEC3B-204ENST00000407298 FAM229BQ4G0N7 80 aa7.16□□□□□ -1.26
APOBEC3B-204ENST00000407298 LINC00304Q8N9R0 145 aa7.16□□□□□ -1.26
APOBEC3B-204ENST00000407298 COLCA2A8K830 154 aa7.15□□□□□ -1.26
APOBEC3B-204ENST00000407298 FAM19A2Q8N3H0 131 aa7.15□□□□□ -1.26
APOBEC3B-204ENST00000407298 IFI27L1Q96BM0 104 aa7.15□□□□□ -1.26
APOBEC3B-204ENST00000407298 CHTOPQ9Y3Y2 248 aaKnown RBP7.15□□□□□ -1.26
APOBEC3B-204ENST00000407298 TRAV12-1A0A0B4J245 112 aa7.14□□□□□ -1.27
APOBEC3B-204ENST00000407298 ZNF625Q96I27 306 aaPredicted RBP7.14□□□□□ -1.27
APOBEC3B-204ENST00000407298 RETNLBQ9BQ08 111 aa7.14□□□□□ -1.27
APOBEC3B-204ENST00000407298 IGLV5-37A0A075B6J1 123 aa7.13□□□□□ -1.27
APOBEC3B-204ENST00000407298 IGKV2D-26A0A0A0MRZ7 120 aa7.13□□□□□ -1.27
APOBEC3B-204ENST00000407298 SERF1AO75920 110 aa7.13□□□□□ -1.27
APOBEC3B-204ENST00000407298 UBE2AP49459 152 aa7.13□□□□□ -1.27
APOBEC3B-204ENST00000407298 TMEM170BQ5T4T1 132 aa7.13□□□□□ -1.27
APOBEC3B-204ENST00000407298 LINC00167Q96N53 147 aa7.13□□□□□ -1.27
APOBEC3B-204ENST00000407298 ANAPC11Q9NYG5 84 aa7.13□□□□□ -1.27
APOBEC3B-204ENST00000407298 TMEM223A0PJW6 202 aa7.12□□□□□ -1.27
APOBEC3B-204ENST00000407298 RPL37AP8A6NKH3 93 aa7.12□□□□□ -1.27
APOBEC3B-204ENST00000407298 HSBP1O75506 76 aa7.12□□□□□ -1.27
APOBEC3B-204ENST00000407298 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
APOBEC3B-204ENST00000407298 Q8NDZ9 215 aa7.12□□□□□ -1.27
APOBEC3B-204ENST00000407298 ERG28Q9UKR5 140 aa7.12□□□□□ -1.27
APOBEC3B-204ENST00000407298 PFN2P35080 140 aa7.11□□□□□ -1.27
APOBEC3B-204ENST00000407298 SCO1O75880 301 aa7.1□□□□□ -1.27
APOBEC3B-204ENST00000407298 NKAPP1Q8N9T2 125 aa7.1□□□□□ -1.27
APOBEC3B-204ENST00000407298 PPDPFQ9H3Y8 114 aa7.1□□□□□ -1.27
APOBEC3B-204ENST00000407298 SND1-IT1Q9HBX3 110 aa7.1□□□□□ -1.27
APOBEC3B-204ENST00000407298 MUC17Q685J3 4493 aa7.1□□□□□ -1.27
APOBEC3B-204ENST00000407298 GAGE10A6NGK3 116 aa7.09□□□□□ -1.27
APOBEC3B-204ENST00000407298 VPREB1P12018 145 aa7.09□□□□□ -1.27
APOBEC3B-204ENST00000407298 LINC01547P58512 204 aaPredicted RBP7.09□□□□□ -1.27
APOBEC3B-204ENST00000407298 COX17Q14061 63 aa7.08□□□□□ -1.28
APOBEC3B-204ENST00000407298 KRTAP13-1Q8IUC0 172 aa7.08□□□□□ -1.28
APOBEC3B-204ENST00000407298 LINC00337Q8N6G1 96 aa7.08□□□□□ -1.28
APOBEC3B-204ENST00000407298 LEPROTL1O95214 131 aa7.07□□□□□ -1.28
APOBEC3B-204ENST00000407298 TSPEAR-AS2P59090 65 aa7.07□□□□□ -1.28
APOBEC3B-204ENST00000407298 SPAG11AQ6PDA7 123 aa7.07□□□□□ -1.28
APOBEC3B-204ENST00000407298 SFTA2Q6UW10 78 aa7.07□□□□□ -1.28
APOBEC3B-204ENST00000407298 H0Y8G0 127 aa7.06□□□□□ -1.28
APOBEC3B-204ENST00000407298 FP248Q71RG6 208 aaPredicted RBP7.06□□□□□ -1.28
APOBEC3B-204ENST00000407298 KRTAP4-12Q9BQ66 201 aa7.06□□□□□ -1.28
APOBEC3B-204ENST00000407298 IGKV2-28A0A075B6P5 120 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 HIST1H2BKO60814 126 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 IGKV2D-28P01615 120 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 HIST1H2BJP06899 126 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 FABP4P15090 132 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 HIST1H2BOP23527 126 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 HIST1H2BBP33778 126 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 HIST1H2BDP58876 126 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 HIST1H2BCP62807 126 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 HIST2H2BEQ16778 126 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 LCE3BQ5TA77 95 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 HIST1H2BHQ93079 126 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 HIST1H2BNQ99877 126 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 HIST1H2BMQ99879 126 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 PMCHL2Q9BQD1 86 aa7.04□□□□□ -1.28
APOBEC3B-204ENST00000407298 A0A0U1RRA0 63 aa7.03□□□□□ -1.28
APOBEC3B-204ENST00000407298 SMIM13P0DJ93 91 aa7.03□□□□□ -1.28
APOBEC3B-204ENST00000407298 HSPB8Q9UJY1 196 aa7.03□□□□□ -1.28
APOBEC3B-204ENST00000407298 TMEM238C9JI98 176 aa7.02□□□□□ -1.29
APOBEC3B-204ENST00000407298 PLNP26678 52 aa7.02□□□□□ -1.29
APOBEC3B-204ENST00000407298 LINC00158P58513 81 aa7.02□□□□□ -1.29
APOBEC3B-204ENST00000407298 ASB16-AS1Q495Z4 193 aa7.02□□□□□ -1.29
APOBEC3B-204ENST00000407298 FAM19A1Q7Z5A9 133 aa7.02□□□□□ -1.29
APOBEC3B-204ENST00000407298 CRCT1Q9UGL9 99 aa7.02□□□□□ -1.29
APOBEC3B-204ENST00000407298 NDUFA12Q9UI09 145 aa7.02□□□□□ -1.29
APOBEC3B-204ENST00000407298 M0R378 163 aa7.01□□□□□ -1.29
APOBEC3B-204ENST00000407298 SEC61BP60468 96 aaKnown RBP7.01□□□□□ -1.29
APOBEC3B-204ENST00000407298 RPL24P83731 157 aaKnown RBP7.01□□□□□ -1.29
APOBEC3B-204ENST00000407298 MIR7-3HGQ8N6C7 128 aa7.01□□□□□ -1.29
APOBEC3B-204ENST00000407298 TMEM126AQ9H061 195 aa7.01□□□□□ -1.29
APOBEC3B-204ENST00000407298 LEPROTO15243 131 aa7□□□□□ -1.29
APOBEC3B-204ENST00000407298 DPM2O94777 84 aa7□□□□□ -1.29
APOBEC3B-204ENST00000407298 HERV-K104P63124 156 aa7□□□□□ -1.29
APOBEC3B-204ENST00000407298 PRLHP81277 87 aa7□□□□□ -1.29
APOBEC3B-204ENST00000407298 PLEKHB2Q96CS7 222 aa7□□□□□ -1.29
APOBEC3B-204ENST00000407298 IGKCP01834 107 aa6.99□□□□□ -1.29
APOBEC3B-204ENST00000407298 MEIG1Q5JSS6 88 aa6.99□□□□□ -1.29
APOBEC3B-204ENST00000407298 MYMXA0A1B0GTQ4 84 aa6.98□□□□□ -1.29
APOBEC3B-204ENST00000407298 J3QQQ9 107 aa6.98□□□□□ -1.29
APOBEC3B-204ENST00000407298 C3orf22Q8N5N4 141 aa6.98□□□□□ -1.29
APOBEC3B-204ENST00000407298 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
APOBEC3B-204ENST00000407298 KRTAP19-1Q8IUB9 90 aa6.97□□□□□ -1.29
APOBEC3B-204ENST00000407298 BOD1L2Q8IYS8 172 aa6.97□□□□□ -1.29
APOBEC3B-204ENST00000407298 DAND5Q8N907 189 aa6.97□□□□□ -1.29
APOBEC3B-204ENST00000407298 MAP1LC3CQ9BXW4 147 aa6.97□□□□□ -1.29
APOBEC3B-204ENST00000407298 ZNF706Q9Y5V0 76 aaPredicted RBP6.97□□□□□ -1.29
APOBEC3B-204ENST00000407298 SYS1-DBNDD2H3BUS1 97 aa6.96□□□□□ -1.3
APOBEC3B-204ENST00000407298 NCR3O14931 201 aa6.96□□□□□ -1.3
APOBEC3B-204ENST00000407298 COA6Q5JTJ3 125 aaKnown RBP6.96□□□□□ -1.3
APOBEC3B-204ENST00000407298 LOC107984156A0A0G2JMH3 177 aa6.95□□□□□ -1.3
APOBEC3B-204ENST00000407298 SPINK1P00995 79 aa6.95□□□□□ -1.3
APOBEC3B-204ENST00000407298 NMUP48645 174 aa6.95□□□□□ -1.3
APOBEC3B-204ENST00000407298 HERVK_113P61574 105 aa6.95□□□□□ -1.3
APOBEC3B-204ENST00000407298 LINC01545Q5VT33 79 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms