RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 KRTAP23-1A1A580 65 aa6.31□□□□□ -1.4
FAM49A-202ENST00000406434 GAGE10A6NGK3 116 aa6.31□□□□□ -1.4
FAM49A-202ENST00000406434 NUPR1O60356 82 aa6.31□□□□□ -1.4
FAM49A-202ENST00000406434 SCO1O75880 301 aa6.31□□□□□ -1.4
FAM49A-202ENST00000406434 LEPROTL1O95214 131 aa6.31□□□□□ -1.4
FAM49A-202ENST00000406434 FABP4P15090 132 aa6.31□□□□□ -1.4
FAM49A-202ENST00000406434 MRPL55Q7Z7F7 128 aaKnown RBP6.31□□□□□ -1.4
FAM49A-202ENST00000406434 DIRC1Q969H9 104 aa6.31□□□□□ -1.4
FAM49A-202ENST00000406434 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
FAM49A-202ENST00000406434 ERG28Q9UKR5 140 aa6.31□□□□□ -1.4
FAM49A-202ENST00000406434 TMEM223A0PJW6 202 aa6.3□□□□□ -1.4
FAM49A-202ENST00000406434 RPL37AP8A6NKH3 93 aa6.3□□□□□ -1.4
FAM49A-202ENST00000406434 LINC00167Q96N53 147 aa6.3□□□□□ -1.4
FAM49A-202ENST00000406434 A0A0U1RRA0 63 aa6.29□□□□□ -1.4
FAM49A-202ENST00000406434 LINC00158P58513 81 aa6.29□□□□□ -1.4
FAM49A-202ENST00000406434 KRTAP10-8P60410 259 aa6.29□□□□□ -1.4
FAM49A-202ENST00000406434 NKAPP1Q8N9T2 125 aa6.29□□□□□ -1.4
FAM49A-202ENST00000406434 TP73-AS1Q9UF72 201 aa6.29□□□□□ -1.4
FAM49A-202ENST00000406434 SND1-IT1Q9HBX3 110 aa6.28□□□□□ -1.4
FAM49A-202ENST00000406434 HSPB8Q9UJY1 196 aa6.28□□□□□ -1.4
FAM49A-202ENST00000406434 H0Y9J4 135 aa6.27□□□□□ -1.41
FAM49A-202ENST00000406434 PCP4P48539 62 aa6.27□□□□□ -1.41
FAM49A-202ENST00000406434 COX17Q14061 63 aa6.27□□□□□ -1.41
FAM49A-202ENST00000406434 SFTA2Q6UW10 78 aa6.27□□□□□ -1.41
FAM49A-202ENST00000406434 KRTAP4-12Q9BQ66 201 aa6.27□□□□□ -1.41
FAM49A-202ENST00000406434 TNXBP22105 4242 aa6.26□□□□□ -1.41
FAM49A-202ENST00000406434 ZNF861PO60384 105 aa6.26□□□□□ -1.41
FAM49A-202ENST00000406434 PMCHL2Q9BQD1 86 aa6.26□□□□□ -1.41
FAM49A-202ENST00000406434 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
FAM49A-202ENST00000406434 RPL24P83731 157 aaKnown RBP6.25□□□□□ -1.41
FAM49A-202ENST00000406434 MEIG1Q5JSS6 88 aa6.25□□□□□ -1.41
FAM49A-202ENST00000406434 PRR26Q8N8Z3 221 aa6.25□□□□□ -1.41
FAM49A-202ENST00000406434 IGLV5-37A0A075B6J1 123 aa6.24□□□□□ -1.41
FAM49A-202ENST00000406434 IGKV2-28A0A075B6P5 120 aa6.24□□□□□ -1.41
FAM49A-202ENST00000406434 BCE1O60756 84 aa6.24□□□□□ -1.41
FAM49A-202ENST00000406434 IGKV2D-28P01615 120 aa6.24□□□□□ -1.41
FAM49A-202ENST00000406434 SMIM13P0DJ93 91 aa6.24□□□□□ -1.41
FAM49A-202ENST00000406434 MAP1LC3CQ9BXW4 147 aa6.24□□□□□ -1.41
FAM49A-202ENST00000406434 DPM2O94777 84 aa6.23□□□□□ -1.41
FAM49A-202ENST00000406434 VPREB1P12018 145 aa6.23□□□□□ -1.41
FAM49A-202ENST00000406434 RPL28P46779 137 aaKnown RBP6.23□□□□□ -1.41
FAM49A-202ENST00000406434 NDUFA12Q9UI09 145 aa6.23□□□□□ -1.41
FAM49A-202ENST00000406434 MYMXA0A1B0GTQ4 84 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 LEPROTO15243 131 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 HIST1H2BKO60814 126 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 IGKCP01834 107 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 HIST1H2BJP06899 126 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 HIST1H2BOP23527 126 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 PLNP26678 52 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 HIST1H2BBP33778 126 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 UBE2AP49459 152 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 HIST1H2BDP58876 126 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 HIST1H2BCP62807 126 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 HIST2H2BEQ16778 126 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.22□□□□□ -1.41
FAM49A-202ENST00000406434 HIST1H2BHQ93079 126 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 PLEKHB2Q96CS7 222 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 HIST1H2BNQ99877 126 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 HIST1H2BMQ99879 126 aa6.22□□□□□ -1.41
FAM49A-202ENST00000406434 HERVK_113P61574 105 aa6.21□□□□□ -1.41
FAM49A-202ENST00000406434 HERV-K104P63124 156 aa6.21□□□□□ -1.41
FAM49A-202ENST00000406434 Q8NDZ9 215 aa6.21□□□□□ -1.41
FAM49A-202ENST00000406434 IGLV1-50A0A075B6I6 118 aa6.2□□□□□ -1.42
FAM49A-202ENST00000406434 LINC00587B1AMM8 73 aa6.2□□□□□ -1.42
FAM49A-202ENST00000406434 TMEM238C9JI98 176 aa6.2□□□□□ -1.42
FAM49A-202ENST00000406434 TSPEAR-AS2P59090 65 aa6.2□□□□□ -1.42
FAM49A-202ENST00000406434 MIR7-3HGQ8N6C7 128 aa6.2□□□□□ -1.42
FAM49A-202ENST00000406434 J3QQQ9 107 aa6.19□□□□□ -1.42
FAM49A-202ENST00000406434 KRTAP1-4P0C5Y4 121 aa6.19□□□□□ -1.42
FAM49A-202ENST00000406434 LGALS3P17931 250 aaKnown RBP6.19□□□□□ -1.42
FAM49A-202ENST00000406434 FAM19A1Q7Z5A9 133 aa6.19□□□□□ -1.42
FAM49A-202ENST00000406434 BOD1L2Q8IYS8 172 aa6.19□□□□□ -1.42
FAM49A-202ENST00000406434 HMCN2Q8NDA2 5059 aa6.19□□□□□ -1.42
FAM49A-202ENST00000406434 M0R378 163 aa6.18□□□□□ -1.42
FAM49A-202ENST00000406434 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
FAM49A-202ENST00000406434 SYS1-DBNDD2H3BUS1 97 aa6.18□□□□□ -1.42
FAM49A-202ENST00000406434 NCR3O14931 201 aa6.18□□□□□ -1.42
FAM49A-202ENST00000406434 PRLHP81277 87 aa6.18□□□□□ -1.42
FAM49A-202ENST00000406434 DAND5Q8N907 189 aa6.18□□□□□ -1.42
FAM49A-202ENST00000406434 TMEM126AQ9H061 195 aa6.18□□□□□ -1.42
FAM49A-202ENST00000406434 RPL13AP40429 203 aaKnown RBP6.17□□□□□ -1.42
FAM49A-202ENST00000406434 ANAPC11Q9NYG5 84 aa6.17□□□□□ -1.42
FAM49A-202ENST00000406434 NMUP48645 174 aa6.16□□□□□ -1.42
FAM49A-202ENST00000406434 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.15□□□□□ -1.43
FAM49A-202ENST00000406434 E9PLD3 99 aa6.15□□□□□ -1.43
FAM49A-202ENST00000406434 CRYGAP11844 174 aa6.15□□□□□ -1.43
FAM49A-202ENST00000406434 KRTDAPP60985 99 aa6.15□□□□□ -1.43
FAM49A-202ENST00000406434 PET117Q6UWS5 81 aa6.15□□□□□ -1.43
FAM49A-202ENST00000406434 KRTAP13-1Q8IUC0 172 aa6.15□□□□□ -1.43
FAM49A-202ENST00000406434 C3orf79P0CE67 100 aa6.14□□□□□ -1.43
FAM49A-202ENST00000406434 MIEN1Q9BRT3 115 aa6.14□□□□□ -1.43
FAM49A-202ENST00000406434 HIGD2AQ9BW72 106 aa6.14□□□□□ -1.43
FAM49A-202ENST00000406434 A0A087X002 238 aa6.13□□□□□ -1.43
FAM49A-202ENST00000406434 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
FAM49A-202ENST00000406434 SCGB1D1O95968 90 aa6.13□□□□□ -1.43
FAM49A-202ENST00000406434 NPC2P61916 151 aa6.13□□□□□ -1.43
FAM49A-202ENST00000406434 LINC01545Q5VT33 79 aa6.13□□□□□ -1.43
FAM49A-202ENST00000406434 TYMSOSQ8TAI1 123 aa6.13□□□□□ -1.43
FAM49A-202ENST00000406434 IGKV2D-26A0A0A0MRZ7 120 aa6.12□□□□□ -1.43
FAM49A-202ENST00000406434 A0A0J9YXY3 114 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms