RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 VPREB1P12018 145 aa12.45□□□□□ -0.42
RHBDD3-202ENST00000406335 COX17Q14061 63 aa12.45□□□□□ -0.42
RHBDD3-202ENST00000406335 Q8NDZ9 215 aa12.44□□□□□ -0.42
RHBDD3-202ENST00000406335 CRYGAP11844 174 aa12.43□□□□□ -0.42
RHBDD3-202ENST00000406335 SFTA2Q6UW10 78 aa12.43□□□□□ -0.42
RHBDD3-202ENST00000406335 IGKV2-28A0A075B6P5 120 aa12.42□□□□□ -0.42
RHBDD3-202ENST00000406335 A0A0U1RRA0 63 aa12.42□□□□□ -0.42
RHBDD3-202ENST00000406335 KRTAP9-6A0A140TA67 174 aa12.42□□□□□ -0.42
RHBDD3-202ENST00000406335 LEPROTL1O95214 131 aa12.42□□□□□ -0.42
RHBDD3-202ENST00000406335 IGKV2D-28P01615 120 aa12.42□□□□□ -0.42
RHBDD3-202ENST00000406335 RPL28P46779 137 aaKnown RBP12.42□□□□□ -0.42
RHBDD3-202ENST00000406335 LINC00158P58513 81 aa12.41□□□□□ -0.42
RHBDD3-202ENST00000406335 FABP4P15090 132 aa12.39□□□□□ -0.43
RHBDD3-202ENST00000406335 A0A087X002 238 aa12.38□□□□□ -0.43
RHBDD3-202ENST00000406335 RPL24P83731 157 aaKnown RBP12.38□□□□□ -0.43
RHBDD3-202ENST00000406335 LCE2AQ5TA79 106 aaPredicted RBP12.38□□□□□ -0.43
RHBDD3-202ENST00000406335 KRTAP13-1Q8IUC0 172 aa12.38□□□□□ -0.43
RHBDD3-202ENST00000406335 SMIM13P0DJ93 91 aa12.37□□□□□ -0.43
RHBDD3-202ENST00000406335 CDIP1Q9H305 208 aa12.37□□□□□ -0.43
RHBDD3-202ENST00000406335 UBE2AP49459 152 aa12.36□□□□□ -0.43
RHBDD3-202ENST00000406335 TMEM238C9JI98 176 aa12.35□□□□□ -0.43
RHBDD3-202ENST00000406335 RETNLBQ9BQ08 111 aa12.35□□□□□ -0.43
RHBDD3-202ENST00000406335 PMCHL2Q9BQD1 86 aa12.35□□□□□ -0.43
RHBDD3-202ENST00000406335 NDUFA12Q9UI09 145 aa12.35□□□□□ -0.43
RHBDD3-202ENST00000406335 HSPB8Q9UJY1 196 aa12.35□□□□□ -0.43
RHBDD3-202ENST00000406335 TSPEAR-AS2P59090 65 aa12.34□□□□□ -0.43
RHBDD3-202ENST00000406335 MEIG1Q5JSS6 88 aa12.34□□□□□ -0.43
RHBDD3-202ENST00000406335 FAT4Q6V0I7 4981 aa12.34□□□□□ -0.43
RHBDD3-202ENST00000406335 TMEM126AQ9H061 195 aa12.33□□□□□ -0.44
RHBDD3-202ENST00000406335 ANAPC11Q9NYG5 84 aa12.33□□□□□ -0.44
RHBDD3-202ENST00000406335 HERV-K104P63124 156 aa12.32□□□□□ -0.44
RHBDD3-202ENST00000406335 PRLHP81277 87 aa12.32□□□□□ -0.44
RHBDD3-202ENST00000406335 MIR7-3HGQ8N6C7 128 aa12.32□□□□□ -0.44
RHBDD3-202ENST00000406335 M0R378 163 aa12.31□□□□□ -0.44
RHBDD3-202ENST00000406335 LEPROTO15243 131 aa12.31□□□□□ -0.44
RHBDD3-202ENST00000406335 ATP6V1G1O75348 118 aa12.31□□□□□ -0.44
RHBDD3-202ENST00000406335 PLNP26678 52 aa12.31□□□□□ -0.44
RHBDD3-202ENST00000406335 FAM19A1Q7Z5A9 133 aa12.31□□□□□ -0.44
RHBDD3-202ENST00000406335 MYMXA0A1B0GTQ4 84 aa12.3□□□□□ -0.44
RHBDD3-202ENST00000406335 DPM2O94777 84 aa12.3□□□□□ -0.44
RHBDD3-202ENST00000406335 HIST1H2BKO60814 126 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 IGKCP01834 107 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 HIST1H2BJP06899 126 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 HIST1H2BOP23527 126 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 HIST1H2BBP33778 126 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 HIST1H2BDP58876 126 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 HIST1H2BCP62807 126 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 HIST2H2BEQ16778 126 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 BOD1L2Q8IYS8 172 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 LINC00304Q8N9R0 145 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 HIST1H2BHQ93079 126 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 PLEKHB2Q96CS7 222 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 HIST1H2BNQ99877 126 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 HIST1H2BMQ99879 126 aa12.28□□□□□ -0.44
RHBDD3-202ENST00000406335 IGLV7-46A0A075B6I9 117 aa12.26□□□□□ -0.45
RHBDD3-202ENST00000406335 J3QQQ9 107 aa12.26□□□□□ -0.45
RHBDD3-202ENST00000406335 NCR3O14931 201 aa12.26□□□□□ -0.45
RHBDD3-202ENST00000406335 MAP1LC3CQ9BXW4 147 aa12.26□□□□□ -0.45
RHBDD3-202ENST00000406335 IGKV2D-26A0A0A0MRZ7 120 aa12.25□□□□□ -0.45
RHBDD3-202ENST00000406335 HERVK_113P61574 105 aa12.25□□□□□ -0.45
RHBDD3-202ENST00000406335 DAND5Q8N907 189 aa12.25□□□□□ -0.45
RHBDD3-202ENST00000406335 LINC00587B1AMM8 73 aa12.24□□□□□ -0.45
RHBDD3-202ENST00000406335 KRTAP13-2Q52LG2 175 aa12.23□□□□□ -0.45
RHBDD3-202ENST00000406335 TPRXLQ17RH7 258 aa12.22□□□□□ -0.45
RHBDD3-202ENST00000406335 LGALS3P17931 250 aaKnown RBP12.21□□□□□ -0.45
RHBDD3-202ENST00000406335 FAM229BQ4G0N7 80 aa12.2□□□□□ -0.46
RHBDD3-202ENST00000406335 SYS1-DBNDD2H3BUS1 97 aa12.19□□□□□ -0.46
RHBDD3-202ENST00000406335 NMUP48645 174 aa12.19□□□□□ -0.46
RHBDD3-202ENST00000406335 HIGD2AQ9BW72 106 aa12.19□□□□□ -0.46
RHBDD3-202ENST00000406335 PRYO14603 147 aa12.18□□□□□ -0.46
RHBDD3-202ENST00000406335 LOC107984156A0A0G2JMH3 177 aa12.17□□□□□ -0.46
RHBDD3-202ENST00000406335 TRBV10-3A0A0K0K1G6 114 aa12.17□□□□□ -0.46
RHBDD3-202ENST00000406335 ARL17AQ8IVW1 177 aa12.17□□□□□ -0.46
RHBDD3-202ENST00000406335 KCNQ1DNQ9H478 68 aa12.17□□□□□ -0.46
RHBDD3-202ENST00000406335 E9PLD3 99 aa12.16□□□□□ -0.46
RHBDD3-202ENST00000406335 PPDPFQ9H3Y8 114 aa12.16□□□□□ -0.46
RHBDD3-202ENST00000406335 SPRR1AP35321 89 aa12.15□□□□□ -0.46
RHBDD3-202ENST00000406335 LINC01545Q5VT33 79 aa12.15□□□□□ -0.46
RHBDD3-202ENST00000406335 A0A0J9YXY3 114 aa12.13□□□□□ -0.47
RHBDD3-202ENST00000406335 KRTAP4-16G5E9R7 235 aaPredicted RBP12.13□□□□□ -0.47
RHBDD3-202ENST00000406335 LINC00337Q8N6G1 96 aa12.13□□□□□ -0.47
RHBDD3-202ENST00000406335 EIF4EBP3O60516 100 aaPredicted RBP12.12□□□□□ -0.47
RHBDD3-202ENST00000406335 NPC2P61916 151 aa12.12□□□□□ -0.47
RHBDD3-202ENST00000406335 ADAMTSL4-AS1Q5T5F5 129 aa12.12□□□□□ -0.47
RHBDD3-202ENST00000406335 SOSTDC1Q6X4U4 206 aa12.12□□□□□ -0.47
RHBDD3-202ENST00000406335 C3orf79P0CE67 100 aa12.11□□□□□ -0.47
RHBDD3-202ENST00000406335 PET117Q6UWS5 81 aa12.11□□□□□ -0.47
RHBDD3-202ENST00000406335 C3orf22Q8N5N4 141 aa12.11□□□□□ -0.47
RHBDD3-202ENST00000406335 MIEN1Q9BRT3 115 aa12.11□□□□□ -0.47
RHBDD3-202ENST00000406335 MUC17Q685J3 4493 aa12.11□□□□□ -0.47
RHBDD3-202ENST00000406335 ETDCA0A1B0GVM5 59 aa12.1□□□□□ -0.47
RHBDD3-202ENST00000406335 DDTP30046 118 aa12.1□□□□□ -0.47
RHBDD3-202ENST00000406335 COA6Q5JTJ3 125 aaKnown RBP12.1□□□□□ -0.47
RHBDD3-202ENST00000406335 SPRR4Q96PI1 79 aa12.1□□□□□ -0.47
RHBDD3-202ENST00000406335 TRBV10-2A0A0K0K1G8 114 aa12.09□□□□□ -0.47
RHBDD3-202ENST00000406335 LINC01547P58512 204 aaPredicted RBP12.09□□□□□ -0.47
RHBDD3-202ENST00000406335 CTAG1AP78358 180 aa12.09□□□□□ -0.47
RHBDD3-202ENST00000406335 C4orf48Q5BLP8 95 aa12.08□□□□□ -0.48
RHBDD3-202ENST00000406335 SMCR5Q8TEV8 140 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms