RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 IGLV5-37A0A075B6J1 123 aa12.79□□□□□ -0.36
PDGFA-204ENST00000405692 IGLV7-43P04211 117 aa12.79□□□□□ -0.36
PDGFA-204ENST00000405692 RPL24P83731 157 aaKnown RBP12.79□□□□□ -0.36
PDGFA-204ENST00000405692 MEIG1Q5JSS6 88 aa12.79□□□□□ -0.36
PDGFA-204ENST00000405692 PET117Q6UWS5 81 aa12.78□□□□□ -0.36
PDGFA-204ENST00000405692 KRTAP11-1Q8IUC1 163 aa12.78□□□□□ -0.36
PDGFA-204ENST00000405692 J3QQQ9 107 aa12.76□□□□□ -0.37
PDGFA-204ENST00000405692 NMUP48645 174 aa12.76□□□□□ -0.37
PDGFA-204ENST00000405692 LGALS3P17931 250 aaKnown RBP12.75□□□□□ -0.37
PDGFA-204ENST00000405692 PKHD1L1Q86WI1 4243 aa12.75□□□□□ -0.37
PDGFA-204ENST00000405692 DIRC1Q969H9 104 aa12.75□□□□□ -0.37
PDGFA-204ENST00000405692 LINC00167Q96N53 147 aa12.75□□□□□ -0.37
PDGFA-204ENST00000405692 SMIM13P0DJ93 91 aa12.74□□□□□ -0.37
PDGFA-204ENST00000405692 LINC01545Q5VT33 79 aa12.74□□□□□ -0.37
PDGFA-204ENST00000405692 A0A0U1RRA0 63 aa12.73□□□□□ -0.37
PDGFA-204ENST00000405692 VPREB1P12018 145 aa12.72□□□□□ -0.37
PDGFA-204ENST00000405692 LINC01600Q96MT4 127 aa12.72□□□□□ -0.37
PDGFA-204ENST00000405692 GAGE10A6NGK3 116 aa12.71□□□□□ -0.37
PDGFA-204ENST00000405692 RPL37AP8A6NKH3 93 aa12.71□□□□□ -0.37
PDGFA-204ENST00000405692 E9PLD3 99 aa12.71□□□□□ -0.37
PDGFA-204ENST00000405692 C3orf79P0CE67 100 aa12.71□□□□□ -0.37
PDGFA-204ENST00000405692 TSPEAR-AS2P59090 65 aa12.71□□□□□ -0.37
PDGFA-204ENST00000405692 KRTDAPP60985 99 aa12.7□□□□□ -0.38
PDGFA-204ENST00000405692 C20orf202A1L168 122 aa12.69□□□□□ -0.38
PDGFA-204ENST00000405692 MIR7-3HGQ8N6C7 128 aa12.69□□□□□ -0.38
PDGFA-204ENST00000405692 H0Y9J4 135 aa12.68□□□□□ -0.38
PDGFA-204ENST00000405692 ZNF861PO60384 105 aa12.67□□□□□ -0.38
PDGFA-204ENST00000405692 BCE1O60756 84 aa12.67□□□□□ -0.38
PDGFA-204ENST00000405692 AKR1D1P51857 326 aa12.67□□□□□ -0.38
PDGFA-204ENST00000405692 RPL28P46779 137 aaKnown RBP12.66□□□□□ -0.38
PDGFA-204ENST00000405692 LRP1Q07954 4544 aaKnown RBP12.65□□□□□ -0.38
PDGFA-204ENST00000405692 IGKV2-28A0A075B6P5 120 aa12.65□□□□□ -0.38
PDGFA-204ENST00000405692 IGKV2D-28P01615 120 aa12.65□□□□□ -0.38
PDGFA-204ENST00000405692 MT1HL1P0DM35 61 aa12.65□□□□□ -0.38
PDGFA-204ENST00000405692 BOD1L2Q8IYS8 172 aa12.65□□□□□ -0.38
PDGFA-204ENST00000405692 IGLV1-50A0A075B6I6 118 aa12.64□□□□□ -0.39
PDGFA-204ENST00000405692 S100A6P06703 90 aa12.64□□□□□ -0.39
PDGFA-204ENST00000405692 S100A2P29034 98 aa12.64□□□□□ -0.39
PDGFA-204ENST00000405692 FAT3Q8TDW7 4589 aa12.64□□□□□ -0.39
PDGFA-204ENST00000405692 M0R378 163 aa12.63□□□□□ -0.39
PDGFA-204ENST00000405692 MIEN1Q9BRT3 115 aa12.62□□□□□ -0.39
PDGFA-204ENST00000405692 IGKV2D-26A0A0A0MRZ7 120 aa12.61□□□□□ -0.39
PDGFA-204ENST00000405692 Q8NDZ9 215 aa12.61□□□□□ -0.39
PDGFA-204ENST00000405692 LOC107984156A0A0G2JMH3 177 aa12.6□□□□□ -0.39
PDGFA-204ENST00000405692 UBE2AP49459 152 aa12.6□□□□□ -0.39
PDGFA-204ENST00000405692 ARL17AQ8IVW1 177 aa12.6□□□□□ -0.39
PDGFA-204ENST00000405692 A0A0J9YXY3 114 aa12.59□□□□□ -0.39
PDGFA-204ENST00000405692 HIST3H2BBQ8N257 126 aa12.59□□□□□ -0.39
PDGFA-204ENST00000405692 DAND5Q8N907 189 aa12.58□□□□□ -0.4
PDGFA-204ENST00000405692 TMEM126AQ9H061 195 aa12.58□□□□□ -0.4
PDGFA-204ENST00000405692 KRTAP10-8P60410 259 aa12.57□□□□□ -0.4
PDGFA-204ENST00000405692 ZNF815PA8K554 130 aa12.56□□□□□ -0.4
PDGFA-204ENST00000405692 S100A12P80511 92 aa12.56□□□□□ -0.4
PDGFA-204ENST00000405692 HIST1H2BLQ99880 126 aa12.56□□□□□ -0.4
PDGFA-204ENST00000405692 NCR3O14931 201 aa12.55□□□□□ -0.4
PDGFA-204ENST00000405692 HERC1Q15751 4861 aa12.55□□□□□ -0.4
PDGFA-204ENST00000405692 TMEM238C9JI98 176 aa12.54□□□□□ -0.4
PDGFA-204ENST00000405692 TIMM17BO60830 172 aa12.54□□□□□ -0.4
PDGFA-204ENST00000405692 FAM19A1Q7Z5A9 133 aa12.54□□□□□ -0.4
PDGFA-204ENST00000405692 TRBV10-2A0A0K0K1G8 114 aa12.53□□□□□ -0.4
PDGFA-204ENST00000405692 PRYO14603 147 aa12.53□□□□□ -0.4
PDGFA-204ENST00000405692 NDUFC2O95298 119 aa12.53□□□□□ -0.4
PDGFA-204ENST00000405692 SNRPEP62304 92 aaKnown RBP12.53□□□□□ -0.4
PDGFA-204ENST00000405692 KRTAP13-1Q8IUC0 172 aa12.52□□□□□ -0.41
PDGFA-204ENST00000405692 SPANXB1Q9NS25 103 aaPredicted RBP12.52□□□□□ -0.41
PDGFA-204ENST00000405692 KRTAP1-4P0C5Y4 121 aa12.51□□□□□ -0.41
PDGFA-204ENST00000405692 RPL13AP40429 203 aaKnown RBP12.51□□□□□ -0.41
PDGFA-204ENST00000405692 ADAMTSL4-AS1Q5T5F5 129 aa12.51□□□□□ -0.41
PDGFA-204ENST00000405692 ATOH7Q8N100 152 aa12.51□□□□□ -0.41
PDGFA-204ENST00000405692 KCNQ1DNQ9H478 68 aa12.5□□□□□ -0.41
PDGFA-204ENST00000405692 PRLHP81277 87 aa12.49□□□□□ -0.41
PDGFA-204ENST00000405692 PRR26Q8N8Z3 221 aa12.49□□□□□ -0.41
PDGFA-204ENST00000405692 TRBV10-3A0A0K0K1G6 114 aa12.48□□□□□ -0.41
PDGFA-204ENST00000405692 NPC2P61916 151 aa12.48□□□□□ -0.41
PDGFA-204ENST00000405692 SCGB1D4Q6XE38 83 aa12.48□□□□□ -0.41
PDGFA-204ENST00000405692 DDTP30046 118 aa12.47□□□□□ -0.41
PDGFA-204ENST00000405692 ANKRD39Q53RE8 183 aa12.47□□□□□ -0.41
PDGFA-204ENST00000405692 S100A7L2Q5SY68 101 aa12.47□□□□□ -0.41
PDGFA-204ENST00000405692 LITAFQ99732 161 aa12.47□□□□□ -0.41
PDGFA-204ENST00000405692 TTTY13Q9BZ97 58 aa12.47□□□□□ -0.41
PDGFA-204ENST00000405692 HSBP1L1C9JCN9 74 aa12.46□□□□□ -0.41
PDGFA-204ENST00000405692 SOSTDC1Q6X4U4 206 aa12.46□□□□□ -0.41
PDGFA-204ENST00000405692 LINC00337Q8N6G1 96 aa12.46□□□□□ -0.41
PDGFA-204ENST00000405692 LINC00308Q8TCZ7 52 aa12.46□□□□□ -0.41
PDGFA-204ENST00000405692 COPS9Q8WXC6 57 aa12.45□□□□□ -0.42
PDGFA-204ENST00000405692 CBY1Q9Y3M2 126 aa12.45□□□□□ -0.42
PDGFA-204ENST00000405692 ETDCA0A1B0GVM5 59 aa12.44□□□□□ -0.42
PDGFA-204ENST00000405692 C5orf52A6NGY3 159 aa12.44□□□□□ -0.42
PDGFA-204ENST00000405692 SPRR1AP35321 89 aa12.44□□□□□ -0.42
PDGFA-204ENST00000405692 SPANXCQ9NY87 97 aa12.44□□□□□ -0.42
PDGFA-204ENST00000405692 CRYGAP11844 174 aa12.42□□□□□ -0.42
PDGFA-204ENST00000405692 HIGD2AQ9BW72 106 aa12.42□□□□□ -0.42
PDGFA-204ENST00000405692 IGLV6-57P01721 117 aa12.41□□□□□ -0.42
PDGFA-204ENST00000405692 SPANXDQ9BXN6 97 aa12.41□□□□□ -0.42
PDGFA-204ENST00000405692 EIF4EBP3O60516 100 aaPredicted RBP12.4□□□□□ -0.42
PDGFA-204ENST00000405692 Q6ZVH6 145 aa12.4□□□□□ -0.42
PDGFA-204ENST00000405692 SCGB1D1O95968 90 aa12.39□□□□□ -0.43
PDGFA-204ENST00000405692 FAM229BQ4G0N7 80 aa12.39□□□□□ -0.43
PDGFA-204ENST00000405692 PCP2Q8IVA1 136 aa12.39□□□□□ -0.43
PDGFA-204ENST00000405692 LINC00518Q8N0U6 118 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms