RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 DNAH8Q96JB1 4490 aa6.74□□□□□ -1.33
RPAIN-204ENST00000405578 A0A096LNI7 61 aa6.73□□□□□ -1.33
RPAIN-204ENST00000405578 SCGB1D1O95968 90 aa6.73□□□□□ -1.33
RPAIN-204ENST00000405578 COX17Q14061 63 aa6.73□□□□□ -1.33
RPAIN-204ENST00000405578 GAGE2EQ4V326 116 aa6.73□□□□□ -1.33
RPAIN-204ENST00000405578 C9orf116Q5BN46 136 aaPredicted RBP6.73□□□□□ -1.33
RPAIN-204ENST00000405578 FAM30AQ9NZY2 134 aa6.73□□□□□ -1.33
RPAIN-204ENST00000405578 GAGE2DQ9UEU5 116 aa6.73□□□□□ -1.33
RPAIN-204ENST00000405578 MEIG1Q5JSS6 88 aa6.72□□□□□ -1.33
RPAIN-204ENST00000405578 STPG4Q8N801 248 aa6.72□□□□□ -1.33
RPAIN-204ENST00000405578 SPACA4Q8TDM5 124 aa6.72□□□□□ -1.33
RPAIN-204ENST00000405578 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
RPAIN-204ENST00000405578 ERG28Q9UKR5 140 aa6.72□□□□□ -1.33
RPAIN-204ENST00000405578 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
RPAIN-204ENST00000405578 DLEU1O43261 78 aa6.71□□□□□ -1.34
RPAIN-204ENST00000405578 CHTF8P0CG12 524 aa6.71□□□□□ -1.34
RPAIN-204ENST00000405578 PFN2P35080 140 aa6.71□□□□□ -1.34
RPAIN-204ENST00000405578 CIRBPQ14011 172 aaKnown RBP6.71□□□□□ -1.34
RPAIN-204ENST00000405578 Q6ZRP5 223 aa6.71□□□□□ -1.34
RPAIN-204ENST00000405578 SCXQ7RTU7 201 aa6.71□□□□□ -1.34
RPAIN-204ENST00000405578 ATOH7Q8N100 152 aa6.71□□□□□ -1.34
RPAIN-204ENST00000405578 LINC00158P58513 81 aa6.7□□□□□ -1.34
RPAIN-204ENST00000405578 ANKRD39Q53RE8 183 aa6.7□□□□□ -1.34
RPAIN-204ENST00000405578 CIRBP-AS1Q8TBR5 109 aa6.7□□□□□ -1.34
RPAIN-204ENST00000405578 SNHG12Q9BXW3 62 aa6.7□□□□□ -1.34
RPAIN-204ENST00000405578 A0A087WYN8 130 aa6.69□□□□□ -1.34
RPAIN-204ENST00000405578 OXTP01178 125 aa6.69□□□□□ -1.34
RPAIN-204ENST00000405578 PLAC8Q9NZF1 115 aa6.69□□□□□ -1.34
RPAIN-204ENST00000405578 PANO1I0J062 215 aa6.68□□□□□ -1.34
RPAIN-204ENST00000405578 TSPEAR-AS2P59090 65 aa6.68□□□□□ -1.34
RPAIN-204ENST00000405578 SVIPQ8NHG7 77 aa6.68□□□□□ -1.34
RPAIN-204ENST00000405578 ZNF815PA8K554 130 aa6.67□□□□□ -1.34
RPAIN-204ENST00000405578 C7orf33Q8WU49 177 aa6.67□□□□□ -1.34
RPAIN-204ENST00000405578 MIEN1Q9BRT3 115 aa6.67□□□□□ -1.34
RPAIN-204ENST00000405578 XAGE1AQ9HD64 81 aa6.67□□□□□ -1.34
RPAIN-204ENST00000405578 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
RPAIN-204ENST00000405578 SMIM13P0DJ93 91 aa6.66□□□□□ -1.34
RPAIN-204ENST00000405578 COL5A1-AS1Q5SY13 56 aa6.66□□□□□ -1.34
RPAIN-204ENST00000405578 SCGB1D4Q6XE38 83 aa6.66□□□□□ -1.34
RPAIN-204ENST00000405578 RNF213Q63HN8 5207 aa6.66□□□□□ -1.34
RPAIN-204ENST00000405578 LRP2P98164 4655 aa6.65□□□□□ -1.34
RPAIN-204ENST00000405578 IGKV2D-26A0A0A0MRZ7 120 aa6.65□□□□□ -1.34
RPAIN-204ENST00000405578 PCP4P48539 62 aa6.65□□□□□ -1.34
RPAIN-204ENST00000405578 RPL24P83731 157 aaKnown RBP6.65□□□□□ -1.34
RPAIN-204ENST00000405578 C9orf129Q5T035 196 aaKnown RBP6.65□□□□□ -1.34
RPAIN-204ENST00000405578 FAM19A5Q7Z5A7 132 aaPredicted RBP6.65□□□□□ -1.34
RPAIN-204ENST00000405578 SND1-IT1Q9HBX3 110 aa6.65□□□□□ -1.34
RPAIN-204ENST00000405578 A0A0J9YXY3 114 aa6.64□□□□□ -1.35
RPAIN-204ENST00000405578 A0A1W2PNN7 141 aa6.64□□□□□ -1.35
RPAIN-204ENST00000405578 MIR7-3HGQ8N6C7 128 aa6.64□□□□□ -1.35
RPAIN-204ENST00000405578 PKHD1L1Q86WI1 4243 aa6.64□□□□□ -1.35
RPAIN-204ENST00000405578 KRTAP10-4P60372 401 aaPredicted RBP6.63□□□□□ -1.35
RPAIN-204ENST00000405578 NKAPP1Q8N9T2 125 aa6.63□□□□□ -1.35
RPAIN-204ENST00000405578 VAMP8Q9BV40 100 aa6.63□□□□□ -1.35
RPAIN-204ENST00000405578 FAM168BA1KXE4 195 aa6.62□□□□□ -1.35
RPAIN-204ENST00000405578 TMEM238C9JI98 176 aa6.62□□□□□ -1.35
RPAIN-204ENST00000405578 M0QXV9 152 aa6.62□□□□□ -1.35
RPAIN-204ENST00000405578 TIMM17BO60830 172 aa6.62□□□□□ -1.35
RPAIN-204ENST00000405578 COPS9Q8WXC6 57 aa6.62□□□□□ -1.35
RPAIN-204ENST00000405578 UBE2BP63146 152 aa6.61□□□□□ -1.35
RPAIN-204ENST00000405578 PCP2Q8IVA1 136 aa6.61□□□□□ -1.35
RPAIN-204ENST00000405578 BOD1L2Q8IYS8 172 aa6.61□□□□□ -1.35
RPAIN-204ENST00000405578 TTTY13Q9BZ97 58 aa6.61□□□□□ -1.35
RPAIN-204ENST00000405578 TP73-AS1Q9UF72 201 aa6.61□□□□□ -1.35
RPAIN-204ENST00000405578 C22orf24Q9Y442 160 aa6.61□□□□□ -1.35
RPAIN-204ENST00000405578 SPATA45Q537H7 98 aa6.6□□□□□ -1.35
RPAIN-204ENST00000405578 MRPL55Q7Z7F7 128 aaKnown RBP6.6□□□□□ -1.35
RPAIN-204ENST00000405578 DAND5Q8N907 189 aa6.6□□□□□ -1.35
RPAIN-204ENST00000405578 PAM16Q9Y3D7 125 aa6.6□□□□□ -1.35
RPAIN-204ENST00000405578 IGLV5-37A0A075B6J1 123 aa6.59□□□□□ -1.35
RPAIN-204ENST00000405578 RPL37AP61513 92 aaKnown RBP6.59□□□□□ -1.35
RPAIN-204ENST00000405578 Q6ZVH6 145 aa6.59□□□□□ -1.35
RPAIN-204ENST00000405578 PHF5AQ7RTV0 110 aaKnown RBP6.59□□□□□ -1.35
RPAIN-204ENST00000405578 UQCR10Q9UDW1 63 aa6.59□□□□□ -1.35
RPAIN-204ENST00000405578 COX8AP10176 69 aa6.58□□□□□ -1.36
RPAIN-204ENST00000405578 LOC107984156A0A0G2JMH3 177 aa6.57□□□□□ -1.36
RPAIN-204ENST00000405578 TMEM238LA0A1B0GVL6 79 aa6.57□□□□□ -1.36
RPAIN-204ENST00000405578 VPREB1P12018 145 aa6.57□□□□□ -1.36
RPAIN-204ENST00000405578 IFITM1P13164 125 aa6.57□□□□□ -1.36
RPAIN-204ENST00000405578 SRSF9Q13242 221 aaKnown RBP eCLIP6.57□□□□□ -1.36
RPAIN-204ENST00000405578 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
RPAIN-204ENST00000405578 ADAMTSL4-AS1Q5T5F5 129 aa6.57□□□□□ -1.36
RPAIN-204ENST00000405578 ARL17AQ8IVW1 177 aa6.57□□□□□ -1.36
RPAIN-204ENST00000405578 SPANXDQ9BXN6 97 aa6.57□□□□□ -1.36
RPAIN-204ENST00000405578 SPANXCQ9NY87 97 aa6.57□□□□□ -1.36
RPAIN-204ENST00000405578 GAGE10A6NGK3 116 aa6.56□□□□□ -1.36
RPAIN-204ENST00000405578 M0R378 163 aa6.56□□□□□ -1.36
RPAIN-204ENST00000405578 NDUFC2O95298 119 aa6.56□□□□□ -1.36
RPAIN-204ENST00000405578 NPC2P61916 151 aa6.56□□□□□ -1.36
RPAIN-204ENST00000405578 SLC25A34Q6PIV7 304 aa6.56□□□□□ -1.36
RPAIN-204ENST00000405578 KRTAP7-1Q8IUC3 87 aa6.56□□□□□ -1.36
RPAIN-204ENST00000405578 LINC00308Q8TCZ7 52 aa6.56□□□□□ -1.36
RPAIN-204ENST00000405578 LITAFQ99732 161 aa6.56□□□□□ -1.36
RPAIN-204ENST00000405578 MT1HL1P0DM35 61 aa6.55□□□□□ -1.36
RPAIN-204ENST00000405578 HNRNPA3P51991 378 aaKnown RBP6.55□□□□□ -1.36
RPAIN-204ENST00000405578 LINC00167Q96N53 147 aa6.55□□□□□ -1.36
RPAIN-204ENST00000405578 SPANXB1Q9NS25 103 aaPredicted RBP6.55□□□□□ -1.36
RPAIN-204ENST00000405578 TNXBP22105 4242 aa6.54□□□□□ -1.36
RPAIN-204ENST00000405578 TRBV10-2A0A0K0K1G8 114 aa6.54□□□□□ -1.36
RPAIN-204ENST00000405578 PRR3P79522 188 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 238.8 ms