RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 NPC2P61916 151 aa14.1□□□□□ -0.15
EPCAM-202ENST00000405271 GAGE2BQ13066 116 aa14.1□□□□□ -0.15
EPCAM-202ENST00000405271 SDIM1Q6ZPB5 146 aa14.1□□□□□ -0.15
EPCAM-202ENST00000405271 LINC01620Q4KN68 170 aa14.09□□□□□ -0.15
EPCAM-202ENST00000405271 SOSTDC1Q6X4U4 206 aa14.09□□□□□ -0.15
EPCAM-202ENST00000405271 A0A096LNI7 61 aa14.08□□□□□ -0.16
EPCAM-202ENST00000405271 CTAG1AP78358 180 aa14.08□□□□□ -0.16
EPCAM-202ENST00000405271 MUSTN1Q8IVN3 82 aa14.08□□□□□ -0.16
EPCAM-202ENST00000405271 CEND1Q8N111 149 aa14.08□□□□□ -0.16
EPCAM-202ENST00000405271 XAGE1AQ9HD64 81 aa14.08□□□□□ -0.16
EPCAM-202ENST00000405271 RPL24P83731 157 aaKnown RBP14.06□□□□□ -0.16
EPCAM-202ENST00000405271 LINC00474Q9P2X8 69 aa14.06□□□□□ -0.16
EPCAM-202ENST00000405271 C9orf129Q5T035 196 aaKnown RBP14.05□□□□□ -0.16
EPCAM-202ENST00000405271 EIF4EBP3O60516 100 aaPredicted RBP14.05□□□□□ -0.16
EPCAM-202ENST00000405271 IGKV2-24A0A0C4DH68 120 aa14.04□□□□□ -0.16
EPCAM-202ENST00000405271 PCP4L1A6NKN8 68 aa14.04□□□□□ -0.16
EPCAM-202ENST00000405271 M0R143 59 aa14.04□□□□□ -0.16
EPCAM-202ENST00000405271 LRP1BQ9NZR2 4599 aa14.03□□□□□ -0.16
EPCAM-202ENST00000405271 TMEM238LA0A1B0GVL6 79 aa14.02□□□□□ -0.16
EPCAM-202ENST00000405271 A6NJY4 79 aa14.02□□□□□ -0.16
EPCAM-202ENST00000405271 NDUFC2O95298 119 aa14.02□□□□□ -0.16
EPCAM-202ENST00000405271 PLA2G2DQ9UNK4 145 aa14.02□□□□□ -0.16
EPCAM-202ENST00000405271 CHTF8P0CG12 524 aa14□□□□□ -0.17
EPCAM-202ENST00000405271 A4D1N5 150 aa14□□□□□ -0.17
EPCAM-202ENST00000405271 FXYD2P54710 66 aa14□□□□□ -0.17
EPCAM-202ENST00000405271 SPACA4Q8TDM5 124 aa14□□□□□ -0.17
EPCAM-202ENST00000405271 BVES-AS1Q5T3Y7 98 aa13.99□□□□□ -0.17
EPCAM-202ENST00000405271 HINT1P49773 126 aaPredicted RBP13.98□□□□□ -0.17
EPCAM-202ENST00000405271 VPREB1P12018 145 aa13.97□□□□□ -0.17
EPCAM-202ENST00000405271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.97□□□□□ -0.17
EPCAM-202ENST00000405271 IGLV5-37A0A075B6J1 123 aa13.95□□□□□ -0.18
EPCAM-202ENST00000405271 Q8NDZ9 215 aa13.95□□□□□ -0.18
EPCAM-202ENST00000405271 DNAH5Q8TE73 4624 aa13.95□□□□□ -0.18
EPCAM-202ENST00000405271 RYR1P21817 5038 aa13.95□□□□□ -0.18
EPCAM-202ENST00000405271 SERTAD4-AS1Q5TG53 156 aa13.95□□□□□ -0.18
EPCAM-202ENST00000405271 FAM168BA1KXE4 195 aa13.94□□□□□ -0.18
EPCAM-202ENST00000405271 PANO1I0J062 215 aa13.94□□□□□ -0.18
EPCAM-202ENST00000405271 KRTAP10-1P60331 282 aa13.94□□□□□ -0.18
EPCAM-202ENST00000405271 HSPG2P98160 4391 aa13.93□□□□□ -0.18
EPCAM-202ENST00000405271 TRBV10-2A0A0K0K1G8 114 aa13.93□□□□□ -0.18
EPCAM-202ENST00000405271 CDK2AP2O75956 126 aa13.93□□□□□ -0.18
EPCAM-202ENST00000405271 FAM19A5Q7Z5A7 132 aaPredicted RBP13.93□□□□□ -0.18
EPCAM-202ENST00000405271 NKAPP1Q8N9T2 125 aa13.93□□□□□ -0.18
EPCAM-202ENST00000405271 A0A0B4J2C4 111 aa13.92□□□□□ -0.18
EPCAM-202ENST00000405271 Q6ZSA8 131 aa13.92□□□□□ -0.18
EPCAM-202ENST00000405271 IGKV2-28A0A075B6P5 120 aa13.91□□□□□ -0.18
EPCAM-202ENST00000405271 NCR3O14931 201 aa13.91□□□□□ -0.18
EPCAM-202ENST00000405271 IGKV2D-28P01615 120 aa13.91□□□□□ -0.18
EPCAM-202ENST00000405271 KRTAP7-1Q8IUC3 87 aa13.9□□□□□ -0.18
EPCAM-202ENST00000405271 DPH3Q96FX2 82 aa13.9□□□□□ -0.18
EPCAM-202ENST00000405271 NHP2Q9NX24 153 aaKnown RBP13.9□□□□□ -0.18
EPCAM-202ENST00000405271 A0A1W2PNN7 141 aa13.9□□□□□ -0.19
EPCAM-202ENST00000405271 A6NDN8 102 aa13.9□□□□□ -0.19
EPCAM-202ENST00000405271 CFC1BP0CG36 223 aa13.9□□□□□ -0.19
EPCAM-202ENST00000405271 CFC1P0CG37 223 aa13.9□□□□□ -0.19
EPCAM-202ENST00000405271 A0A1B0GWB2 263 aa13.89□□□□□ -0.19
EPCAM-202ENST00000405271 EPM2AB3EWF7 344 aa13.89□□□□□ -0.19
EPCAM-202ENST00000405271 M0R378 163 aa13.89□□□□□ -0.19
EPCAM-202ENST00000405271 PRR3P79522 188 aaKnown RBP13.89□□□□□ -0.19
EPCAM-202ENST00000405271 BATFQ16520 125 aa13.89□□□□□ -0.19
EPCAM-202ENST00000405271 A0A087WYN8 130 aa13.88□□□□□ -0.19
EPCAM-202ENST00000405271 TRAV13-2A0A0B4J235 113 aa13.88□□□□□ -0.19
EPCAM-202ENST00000405271 M0QXV9 152 aa13.88□□□□□ -0.19
EPCAM-202ENST00000405271 RAB37Q96AX2 223 aa13.88□□□□□ -0.19
EPCAM-202ENST00000405271 PCLOQ9Y6V0 5065 aa13.88□□□□□ -0.19
EPCAM-202ENST00000405271 APOBP04114 4563 aaKnown RBP13.88□□□□□ -0.19
EPCAM-202ENST00000405271 LINC00337Q8N6G1 96 aa13.87□□□□□ -0.19
EPCAM-202ENST00000405271 PLAC8Q9NZF1 115 aa13.87□□□□□ -0.19
EPCAM-202ENST00000405271 C22orf24Q9Y442 160 aa13.87□□□□□ -0.19
EPCAM-202ENST00000405271 MRPL55Q7Z7F7 128 aaKnown RBP13.86□□□□□ -0.19
EPCAM-202ENST00000405271 SNHG12Q9BXW3 62 aa13.86□□□□□ -0.19
EPCAM-202ENST00000405271 FAM30AQ9NZY2 134 aa13.86□□□□□ -0.19
EPCAM-202ENST00000405271 KRTAP17-1Q9BYP8 105 aa13.85□□□□□ -0.19
EPCAM-202ENST00000405271 S100A7L2Q5SY68 101 aa13.85□□□□□ -0.19
EPCAM-202ENST00000405271 C7orf33Q8WU49 177 aa13.85□□□□□ -0.19
EPCAM-202ENST00000405271 LBHQ53QV2 105 aaPredicted RBP13.84□□□□□ -0.19
EPCAM-202ENST00000405271 TMEM126AQ9H061 195 aa13.84□□□□□ -0.19
EPCAM-202ENST00000405271 PRO1854Q9UHT4 67 aa13.84□□□□□ -0.19
EPCAM-202ENST00000405271 OR13C6PQ8NH95 151 aa13.83□□□□□ -0.2
EPCAM-202ENST00000405271 K7ERJ3 54 aa13.82□□□□□ -0.2
EPCAM-202ENST00000405271 IGLV6-57P01721 117 aa13.81□□□□□ -0.2
EPCAM-202ENST00000405271 RPL13AP40429 203 aaKnown RBP13.81□□□□□ -0.2
EPCAM-202ENST00000405271 SCXQ7RTU7 201 aa13.8□□□□□ -0.2
EPCAM-202ENST00000405271 LINC00167Q96N53 147 aa13.8□□□□□ -0.2
EPCAM-202ENST00000405271 KRTAP4-5Q9BYR2 181 aa13.8□□□□□ -0.2
EPCAM-202ENST00000405271 CBY1Q9Y3M2 126 aa13.8□□□□□ -0.2
EPCAM-202ENST00000405271 TRBV10-3A0A0K0K1G6 114 aa13.8□□□□□ -0.2
EPCAM-202ENST00000405271 PHF5AQ7RTV0 110 aaKnown RBP13.8□□□□□ -0.2
EPCAM-202ENST00000405271 CIRBP-AS1Q8TBR5 109 aa13.8□□□□□ -0.2
EPCAM-202ENST00000405271 GAGE10A6NGK3 116 aa13.79□□□□□ -0.2
EPCAM-202ENST00000405271 DNAH8Q96JB1 4490 aa13.77□□□□□ -0.2
EPCAM-202ENST00000405271 IGLV1-50A0A075B6I6 118 aa13.77□□□□□ -0.21
EPCAM-202ENST00000405271 XGP55808 180 aa13.75□□□□□ -0.21
EPCAM-202ENST00000405271 UBE2BP63146 152 aa13.75□□□□□ -0.21
EPCAM-202ENST00000405271 COL5A1-AS1Q5SY13 56 aa13.75□□□□□ -0.21
EPCAM-202ENST00000405271 RPL37AP8A6NKH3 93 aa13.74□□□□□ -0.21
EPCAM-202ENST00000405271 TRAV23DV6A0A075B6W5 121 aa13.74□□□□□ -0.21
EPCAM-202ENST00000405271 PRYO14603 147 aa13.74□□□□□ -0.21
EPCAM-202ENST00000405271 Q1RN00 199 aa13.74□□□□□ -0.21
EPCAM-202ENST00000405271 Q8N1X5 172 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms