RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 NDUFA12Q9UI09 145 aa8.65□□□□□ -1.02
VAMP2-202ENST00000404970 NMUP48645 174 aa8.64□□□□□ -1.03
VAMP2-202ENST00000404970 J3QQQ9 107 aa8.64□□□□□ -1.03
VAMP2-202ENST00000404970 LGALS3P17931 250 aaKnown RBP8.64□□□□□ -1.03
VAMP2-202ENST00000404970 HIST1H2BLQ99880 126 aa8.64□□□□□ -1.03
VAMP2-202ENST00000404970 E9PLD3 99 aa8.63□□□□□ -1.03
VAMP2-202ENST00000404970 SND1-IT1Q9HBX3 110 aa8.63□□□□□ -1.03
VAMP2-202ENST00000404970 C22orf24Q9Y442 160 aa8.63□□□□□ -1.03
VAMP2-202ENST00000404970 DMBT1Q9UGM3 2413 aaPredicted RBP8.62□□□□□ -1.03
VAMP2-202ENST00000404970 MEIG1Q5JSS6 88 aa8.62□□□□□ -1.03
VAMP2-202ENST00000404970 A0A0U1RRA0 63 aa8.61□□□□□ -1.03
VAMP2-202ENST00000404970 KRTAP29-1A8MX34 341 aaPredicted RBP8.61□□□□□ -1.03
VAMP2-202ENST00000404970 LINC00158P58513 81 aa8.61□□□□□ -1.03
VAMP2-202ENST00000404970 SNRPEP62304 92 aaKnown RBP8.61□□□□□ -1.03
VAMP2-202ENST00000404970 SRSF9Q13242 221 aaKnown RBP eCLIP8.61□□□□□ -1.03
VAMP2-202ENST00000404970 PLA2G2DQ9UNK4 145 aa8.61□□□□□ -1.03
VAMP2-202ENST00000404970 IGLV5-37A0A075B6J1 123 aa8.6□□□□□ -1.03
VAMP2-202ENST00000404970 C5orf52A6NGY3 159 aa8.59□□□□□ -1.03
VAMP2-202ENST00000404970 SMIM13P0DJ93 91 aa8.59□□□□□ -1.03
VAMP2-202ENST00000404970 VPREB1P12018 145 aa8.59□□□□□ -1.03
VAMP2-202ENST00000404970 LBHQ53QV2 105 aaPredicted RBP8.59□□□□□ -1.03
VAMP2-202ENST00000404970 C1orf137Q5JT78 98 aa8.59□□□□□ -1.03
VAMP2-202ENST00000404970 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
VAMP2-202ENST00000404970 UBE2BP63146 152 aa8.57□□□□□ -1.04
VAMP2-202ENST00000404970 RPL24P83731 157 aaKnown RBP8.57□□□□□ -1.04
VAMP2-202ENST00000404970 MRPL55Q7Z7F7 128 aaKnown RBP8.57□□□□□ -1.04
VAMP2-202ENST00000404970 LINC00167Q96N53 147 aa8.57□□□□□ -1.04
VAMP2-202ENST00000404970 TNXBP22105 4242 aa8.57□□□□□ -1.04
VAMP2-202ENST00000404970 GAGE10A6NGK3 116 aa8.57□□□□□ -1.04
VAMP2-202ENST00000404970 MT1HL1P0DM35 61 aa8.57□□□□□ -1.04
VAMP2-202ENST00000404970 NKAPP1Q8N9T2 125 aa8.57□□□□□ -1.04
VAMP2-202ENST00000404970 IGKV2D-26A0A0A0MRZ7 120 aa8.56□□□□□ -1.04
VAMP2-202ENST00000404970 RPL37AP8A6NKH3 93 aa8.56□□□□□ -1.04
VAMP2-202ENST00000404970 IGLV7-43P04211 117 aa8.56□□□□□ -1.04
VAMP2-202ENST00000404970 OXTP01178 125 aa8.55□□□□□ -1.04
VAMP2-202ENST00000404970 SPINK6Q6UWN8 80 aa8.55□□□□□ -1.04
VAMP2-202ENST00000404970 MIR7-3HGQ8N6C7 128 aa8.55□□□□□ -1.04
VAMP2-202ENST00000404970 DAND5Q8N907 189 aa8.55□□□□□ -1.04
VAMP2-202ENST00000404970 TTTY13Q9BZ97 58 aa8.55□□□□□ -1.04
VAMP2-202ENST00000404970 HSBP1L1C9JCN9 74 aa8.53□□□□□ -1.04
VAMP2-202ENST00000404970 ATOH7Q8N100 152 aa8.53□□□□□ -1.04
VAMP2-202ENST00000404970 A0A0J9YXY3 114 aa8.52□□□□□ -1.05
VAMP2-202ENST00000404970 ZNF815PA8K554 130 aa8.52□□□□□ -1.05
VAMP2-202ENST00000404970 J3QL48 77 aa8.52□□□□□ -1.05
VAMP2-202ENST00000404970 EIF4EBP3O60516 100 aaPredicted RBP8.51□□□□□ -1.05
VAMP2-202ENST00000404970 ANKRD39Q53RE8 183 aa8.51□□□□□ -1.05
VAMP2-202ENST00000404970 ADAMTSL4-AS1Q5T5F5 129 aa8.51□□□□□ -1.05
VAMP2-202ENST00000404970 MIEN1Q9BRT3 115 aa8.51□□□□□ -1.05
VAMP2-202ENST00000404970 IGKV2-28A0A075B6P5 120 aa8.51□□□□□ -1.05
VAMP2-202ENST00000404970 TIMM17BO60830 172 aa8.51□□□□□ -1.05
VAMP2-202ENST00000404970 SCGB1D1O95968 90 aa8.51□□□□□ -1.05
VAMP2-202ENST00000404970 IGKV2D-28P01615 120 aa8.51□□□□□ -1.05
VAMP2-202ENST00000404970 IGLV1-50A0A075B6I6 118 aa8.5□□□□□ -1.05
VAMP2-202ENST00000404970 LOC107984156A0A0G2JMH3 177 aa8.5□□□□□ -1.05
VAMP2-202ENST00000404970 SOSTDC1Q6X4U4 206 aa8.5□□□□□ -1.05
VAMP2-202ENST00000404970 ARL17AQ8IVW1 177 aa8.5□□□□□ -1.05
VAMP2-202ENST00000404970 BOD1L2Q8IYS8 172 aa8.5□□□□□ -1.05
VAMP2-202ENST00000404970 LITAFQ99732 161 aa8.5□□□□□ -1.05
VAMP2-202ENST00000404970 LINC01600Q96MT4 127 aa8.49□□□□□ -1.05
VAMP2-202ENST00000404970 TMEM238C9JI98 176 aa8.48□□□□□ -1.05
VAMP2-202ENST00000404970 H0Y9J4 135 aa8.48□□□□□ -1.05
VAMP2-202ENST00000404970 NCR3O14931 201 aa8.48□□□□□ -1.05
VAMP2-202ENST00000404970 SCGB1D4Q6XE38 83 aa8.48□□□□□ -1.05
VAMP2-202ENST00000404970 KRTAP13-1Q8IUC0 172 aa8.48□□□□□ -1.05
VAMP2-202ENST00000404970 M0R378 163 aa8.47□□□□□ -1.05
VAMP2-202ENST00000404970 BCE1O60756 84 aa8.47□□□□□ -1.05
VAMP2-202ENST00000404970 KRTAP1-4P0C5Y4 121 aa8.46□□□□□ -1.05
VAMP2-202ENST00000404970 TMA7Q9Y2S6 64 aaKnown RBP8.46□□□□□ -1.05
VAMP2-202ENST00000404970 ZNF861PO60384 105 aa8.45□□□□□ -1.06
VAMP2-202ENST00000404970 NPC2P61916 151 aa8.45□□□□□ -1.06
VAMP2-202ENST00000404970 COPS9Q8WXC6 57 aa8.45□□□□□ -1.06
VAMP2-202ENST00000404970 DIRC1Q969H9 104 aa8.45□□□□□ -1.06
VAMP2-202ENST00000404970 UBR4Q5T4S7 5183 aa8.45□□□□□ -1.06
VAMP2-202ENST00000404970 NDUFC2O95298 119 aa8.45□□□□□ -1.06
VAMP2-202ENST00000404970 REG3GQ6UW15 175 aa8.45□□□□□ -1.06
VAMP2-202ENST00000404970 PCP2Q8IVA1 136 aa8.45□□□□□ -1.06
VAMP2-202ENST00000404970 TMEM126AQ9H061 195 aa8.45□□□□□ -1.06
VAMP2-202ENST00000404970 HMCN2Q8NDA2 5059 aa8.44□□□□□ -1.06
VAMP2-202ENST00000404970 TRBV10-2A0A0K0K1G8 114 aa8.44□□□□□ -1.06
VAMP2-202ENST00000404970 KRTAP10-8P60410 259 aa8.44□□□□□ -1.06
VAMP2-202ENST00000404970 SPANXB1Q9NS25 103 aaPredicted RBP8.44□□□□□ -1.06
VAMP2-202ENST00000404970 S100A12P80511 92 aa8.43□□□□□ -1.06
VAMP2-202ENST00000404970 Q6ZVH6 145 aa8.43□□□□□ -1.06
VAMP2-202ENST00000404970 PRLHP81277 87 aa8.42□□□□□ -1.06
VAMP2-202ENST00000404970 JOSD1Q15040 202 aaPredicted RBP8.42□□□□□ -1.06
VAMP2-202ENST00000404970 LINC00308Q8TCZ7 52 aa8.42□□□□□ -1.06
VAMP2-202ENST00000404970 SPANXDQ9BXN6 97 aa8.42□□□□□ -1.06
VAMP2-202ENST00000404970 SPANXCQ9NY87 97 aa8.42□□□□□ -1.06
VAMP2-202ENST00000404970 TRBV10-3A0A0K0K1G6 114 aa8.41□□□□□ -1.06
VAMP2-202ENST00000404970 RPL28P46779 137 aaKnown RBP8.41□□□□□ -1.06
VAMP2-202ENST00000404970 IFITM1P13164 125 aa8.4□□□□□ -1.06
VAMP2-202ENST00000404970 PRYO14603 147 aa8.39□□□□□ -1.07
VAMP2-202ENST00000404970 UBE2AP49459 152 aa8.39□□□□□ -1.07
VAMP2-202ENST00000404970 PRR26Q8N8Z3 221 aa8.39□□□□□ -1.07
VAMP2-202ENST00000404970 PPDPFQ9H3Y8 114 aa8.39□□□□□ -1.07
VAMP2-202ENST00000404970 KRTAP4-16G5E9R7 235 aaPredicted RBP8.38□□□□□ -1.07
VAMP2-202ENST00000404970 SPRR1AP35321 89 aa8.38□□□□□ -1.07
VAMP2-202ENST00000404970 S100A7L2Q5SY68 101 aa8.38□□□□□ -1.07
VAMP2-202ENST00000404970 FAM19A1Q7Z5A9 133 aa8.38□□□□□ -1.07
VAMP2-202ENST00000404970 VAMP8Q9BV40 100 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms