RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 Q1RN00 199 aa2.42□□□□□ -2.02
RTN4-208ENST00000404909 C14orf177Q52M58 125 aa2.42□□□□□ -2.02
RTN4-208ENST00000404909 Q6ZRP5 223 aa2.42□□□□□ -2.02
RTN4-208ENST00000404909 LRCOL1A6NCL2 159 aa2.41□□□□□ -2.02
RTN4-208ENST00000404909 TSPAN13O95857 204 aa2.41□□□□□ -2.02
RTN4-208ENST00000404909 FUSP35637 526 aaKnown RBP eCLIP2.41□□□□□ -2.021e-8■□□□□ 8.2
RTN4-208ENST00000404909 LINC01620Q4KN68 170 aa2.41□□□□□ -2.02
RTN4-208ENST00000404909 PRO1854Q9UHT4 67 aa2.41□□□□□ -2.02
RTN4-208ENST00000404909 KMT2CQ8NEZ4 4911 aaKnown RBP2.41□□□□□ -2.02
RTN4-208ENST00000404909 F8WDY8 70 aa2.41□□□□□ -2.02
RTN4-208ENST00000404909 GAGE2BQ13066 116 aa2.41□□□□□ -2.02
RTN4-208ENST00000404909 OR13C6PQ8NH95 151 aa2.41□□□□□ -2.02
RTN4-208ENST00000404909 DNAH6Q9C0G6 4158 aa2.41□□□□□ -2.02
RTN4-208ENST00000404909 DNAH17Q9UFH2 4485 aa2.41□□□□□ -2.02
RTN4-208ENST00000404909 A0A087WTM6 91 aa2.41□□□□□ -2.02
RTN4-208ENST00000404909 A0A1B0GWB2 263 aa2.41□□□□□ -2.02
RTN4-208ENST00000404909 HECTD4Q9Y4D8 3996 aa2.41□□□□□ -2.02
RTN4-208ENST00000404909 A0A0B4J2C4 111 aa2.4□□□□□ -2.02
RTN4-208ENST00000404909 IGKV2-24A0A0C4DH68 120 aa2.4□□□□□ -2.02
RTN4-208ENST00000404909 NCR3O14931 201 aa2.4□□□□□ -2.02
RTN4-208ENST00000404909 RPL13AP40429 203 aaKnown RBP2.4□□□□□ -2.02
RTN4-208ENST00000404909 Q8N814 137 aa2.4□□□□□ -2.02
RTN4-208ENST00000404909 IGKV2-28A0A075B6P5 120 aa2.4□□□□□ -2.02
RTN4-208ENST00000404909 LOC107984156A0A0G2JMH3 177 aa2.4□□□□□ -2.02
RTN4-208ENST00000404909 C9orf118A6NHY6 69 aa2.4□□□□□ -2.02
RTN4-208ENST00000404909 IGKV2D-28P01615 120 aa2.4□□□□□ -2.02
RTN4-208ENST00000404909 PSMB2P49721 201 aa2.4□□□□□ -2.02
RTN4-208ENST00000404909 CNBPP62633 177 aaKnown RBP2.4□□□□□ -2.02
RTN4-208ENST00000404909 ARL17AQ8IVW1 177 aa2.4□□□□□ -2.02
RTN4-208ENST00000404909 LINC00337Q8N6G1 96 aa2.4□□□□□ -2.02
RTN4-208ENST00000404909 Q8NDZ9 215 aa2.4□□□□□ -2.02
RTN4-208ENST00000404909 TNP2Q05952 138 aa2.4□□□□□ -2.03
RTN4-208ENST00000404909 VAMP3Q15836 100 aa2.4□□□□□ -2.03
RTN4-208ENST00000404909 FRAS1Q86XX4 4008 aa2.4□□□□□ -2.03
RTN4-208ENST00000404909 TRAV13-2A0A0B4J235 113 aa2.4□□□□□ -2.03
RTN4-208ENST00000404909 LOC107984640A0A0U1RRK4 108 aa2.4□□□□□ -2.03
RTN4-208ENST00000404909 SCGB1C2P0DMR2 95 aa2.4□□□□□ -2.03
RTN4-208ENST00000404909 RNF151Q2KHN1 245 aa2.4□□□□□ -2.03
RTN4-208ENST00000404909 C9orf129Q5T035 196 aaKnown RBP2.4□□□□□ -2.03
RTN4-208ENST00000404909 S100A7L2Q5SY68 101 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 FAT2Q9NYQ8 4349 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 A0A096LNI7 61 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 A0A1W2PPM0 123 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 FAM168BA1KXE4 195 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 GAGE10A6NGK3 116 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 RTL8CO15255 209 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 CHTF8P0CG12 524 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 FABP2P12104 132 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 LCE6AA0A183 80 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 NDUFC2O95298 119 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 TLX1NBP0CAT3 122 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 SERTAD4-AS1Q5TG53 156 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 FAM19A5Q7Z5A7 132 aaPredicted RBP2.39□□□□□ -2.03
RTN4-208ENST00000404909 NKAPP1Q8N9T2 125 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 PPDPFQ9H3Y8 114 aa2.39□□□□□ -2.03
RTN4-208ENST00000404909 IGLV5-52A0A0A0MRZ9 124 aa2.38□□□□□ -2.03
RTN4-208ENST00000404909 TRIAP1O43715 76 aa2.38□□□□□ -2.03
RTN4-208ENST00000404909 C9orf163Q8N9P6 203 aa2.38□□□□□ -2.03
RTN4-208ENST00000404909 C16orf90A8MZG2 172 aa2.38□□□□□ -2.03
RTN4-208ENST00000404909 VPREB1P12018 145 aa2.38□□□□□ -2.03
RTN4-208ENST00000404909 SPCS1Q9Y6A9 102 aa2.38□□□□□ -2.03
RTN4-208ENST00000404909 DNAH11Q96DT5 4516 aa2.38□□□□□ -2.03
RTN4-208ENST00000404909 RYR2Q92736 4967 aa2.38□□□□□ -2.03
RTN4-208ENST00000404909 TRBV10-3A0A0K0K1G6 114 aa2.38□□□□□ -2.03
RTN4-208ENST00000404909 SMIM11BQ8TCY0 68 aa2.38□□□□□ -2.03
RTN4-208ENST00000404909 TMEM126AQ9H061 195 aa2.38□□□□□ -2.03
RTN4-208ENST00000404909 DNAH5Q8TE73 4624 aa2.37□□□□□ -2.03
RTN4-208ENST00000404909 COX6CP09669 75 aa2.37□□□□□ -2.03
RTN4-208ENST00000404909 SDIM1Q6ZPB5 146 aa2.37□□□□□ -2.03
RTN4-208ENST00000404909 RPL37AP8A6NKH3 93 aa2.37□□□□□ -2.03
RTN4-208ENST00000404909 M0R378 163 aa2.37□□□□□ -2.03
RTN4-208ENST00000404909 SNCGO76070 127 aa2.37□□□□□ -2.03
RTN4-208ENST00000404909 KRTAP10-2P60368 255 aa2.37□□□□□ -2.03
RTN4-208ENST00000404909 PKHD1P08F94 4074 aa2.37□□□□□ -2.03
RTN4-208ENST00000404909 TRBV10-2A0A0K0K1G8 114 aa2.37□□□□□ -2.03
RTN4-208ENST00000404909 LYRM7Q5U5X0 104 aa2.37□□□□□ -2.03
RTN4-208ENST00000404909 CLEC2BQ92478 149 aa2.37□□□□□ -2.03
RTN4-208ENST00000404909 C22orf24Q9Y442 160 aa2.37□□□□□ -2.03
RTN4-208ENST00000404909 A0A1W2PNN7 141 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 H3BMG7 143 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 PANO1I0J062 215 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 TCL1BO95988 128 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 IGLV6-57P01721 117 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 GTF2H5Q6ZYL4 71 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 C7orf33Q8WU49 177 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 K7EP34 96 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 M0QXV9 152 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 RPL28P46779 137 aaKnown RBP2.36□□□□□ -2.03
RTN4-208ENST00000404909 C6orf99Q4VX62 202 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 MRPL55Q7Z7F7 128 aaKnown RBP2.36□□□□□ -2.03
RTN4-208ENST00000404909 KRTAP7-1Q8IUC3 87 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 MTURNQ8N3F0 131 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.36□□□□□ -2.03
RTN4-208ENST00000404909 TRAV23DV6A0A075B6W5 121 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 LINC00167Q96N53 147 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 LINC00474Q9P2X8 69 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 PKIGQ9Y2B9 76 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 PKD1P98161 4303 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 UBE2V1Q13404 147 aa2.36□□□□□ -2.03
RTN4-208ENST00000404909 RYR3Q15413 4870 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms