RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CMYA5Q8N3K9 4069 aa13.52□□□□□ -0.25
CCDC47-202ENST00000403162 A0A087WVE0 104 aa13.52□□□□□ -0.25
CCDC47-202ENST00000403162 SERP2Q8N6R1 65 aa13.52□□□□□ -0.25
CCDC47-202ENST00000403162 KRTAP10-11P60412 298 aa13.51□□□□□ -0.25
CCDC47-202ENST00000403162 ATP5EP2Q5VTU8 51 aa13.51□□□□□ -0.25
CCDC47-202ENST00000403162 PKD1L1Q8TDX9 2849 aa13.51□□□□□ -0.25
CCDC47-202ENST00000403162 USP17L23D6RBM5 183 aa13.5□□□□□ -0.25
CCDC47-202ENST00000403162 REG3AQ06141 175 aa13.5□□□□□ -0.25
CCDC47-202ENST00000403162 EGFEM1PQ0D2K5 195 aa13.5□□□□□ -0.25
CCDC47-202ENST00000403162 ANGP03950 147 aaKnown RBP13.49□□□□□ -0.25
CCDC47-202ENST00000403162 C9orf116Q5BN46 136 aaPredicted RBP13.49□□□□□ -0.25
CCDC47-202ENST00000403162 hADV29S1A0JD25 119 aa13.48□□□□□ -0.25
CCDC47-202ENST00000403162 IGLV10-54A0A075B6I4 117 aa13.48□□□□□ -0.25
CCDC47-202ENST00000403162 C6orf99Q4VX62 202 aa13.48□□□□□ -0.25
CCDC47-202ENST00000403162 Q8NDZ9 215 aa13.48□□□□□ -0.25
CCDC47-202ENST00000403162 MUC7Q8TAX7 377 aa13.48□□□□□ -0.25
CCDC47-202ENST00000403162 LYPD5Q6UWN5 251 aa13.47□□□□□ -0.25
CCDC47-202ENST00000403162 LINC00575Q6W349 94 aa13.47□□□□□ -0.25
CCDC47-202ENST00000403162 UPK3BQ9BT76 320 aa13.47□□□□□ -0.25
CCDC47-202ENST00000403162 Q8N3U1 123 aa13.46□□□□□ -0.25
CCDC47-202ENST00000403162 KRTAP21-3Q3LHN1 58 aa13.44□□□□□ -0.26
CCDC47-202ENST00000403162 CYSTM1Q9H1C7 97 aa13.44□□□□□ -0.26
CCDC47-202ENST00000403162 J3KT08 172 aa13.43□□□□□ -0.26
CCDC47-202ENST00000403162 IGHV4-30-4P0DP06 118 aa13.42□□□□□ -0.26
CCDC47-202ENST00000403162 TRBV10-3A0A0K0K1G6 114 aa13.42□□□□□ -0.26
CCDC47-202ENST00000403162 A0A0J9YWU9 116 aa13.41□□□□□ -0.26
CCDC47-202ENST00000403162 TMEM258P61165 79 aa13.41□□□□□ -0.26
CCDC47-202ENST00000403162 RPS28P62857 69 aaKnown RBP13.41□□□□□ -0.26
CCDC47-202ENST00000403162 UBL5Q9BZL1 73 aa13.41□□□□□ -0.26
CCDC47-202ENST00000403162 ZNF561-AS1K7EIQ3 104 aa13.4□□□□□ -0.26
CCDC47-202ENST00000403162 DAD1P61803 113 aa13.4□□□□□ -0.26
CCDC47-202ENST00000403162 SPAG11BQ08648 103 aa13.4□□□□□ -0.26
CCDC47-202ENST00000403162 C10orf25Q5T742 122 aa13.4□□□□□ -0.26
CCDC47-202ENST00000403162 UNQ6190/PRO20217Q6UXQ8 127 aa13.39□□□□□ -0.27
CCDC47-202ENST00000403162 LOC110117498A0A087WWA1 95 aa13.39□□□□□ -0.27
CCDC47-202ENST00000403162 IGLV6-57P01721 117 aa13.39□□□□□ -0.27
CCDC47-202ENST00000403162 DEFB135Q30KP9 77 aa13.39□□□□□ -0.27
CCDC47-202ENST00000403162 Q6ZQT0 140 aa13.39□□□□□ -0.27
CCDC47-202ENST00000403162 DEFB4AO15263 64 aa13.38□□□□□ -0.27
CCDC47-202ENST00000403162 C6orf223Q8N319 242 aa13.38□□□□□ -0.27
CCDC47-202ENST00000403162 LOC107984640A0A0U1RRK4 108 aa13.38□□□□□ -0.27
CCDC47-202ENST00000403162 APOC4P55056 127 aa13.38□□□□□ -0.27
CCDC47-202ENST00000403162 RBM3P98179 157 aaKnown RBP13.38□□□□□ -0.27
CCDC47-202ENST00000403162 PRB2P02812 416 aaPredicted RBP13.37□□□□□ -0.27
CCDC47-202ENST00000403162 ENHOQ6UWT2 76 aa13.37□□□□□ -0.27
CCDC47-202ENST00000403162 LELP1Q5T871 98 aa13.36□□□□□ -0.27
CCDC47-202ENST00000403162 FAM19A1Q7Z5A9 133 aa13.36□□□□□ -0.27
CCDC47-202ENST00000403162 GHRHP01286 108 aa13.35□□□□□ -0.27
CCDC47-202ENST00000403162 PRR34Q9NV39 138 aa13.35□□□□□ -0.27
CCDC47-202ENST00000403162 GVQW2A0A096LPI5 108 aaPredicted RBP13.34□□□□□ -0.27
CCDC47-202ENST00000403162 H3BQ85 93 aa13.34□□□□□ -0.27
CCDC47-202ENST00000403162 KPRPQ5T749 579 aaPredicted RBP13.34□□□□□ -0.27
CCDC47-202ENST00000403162 CELA1Q9UNI1 258 aa13.34□□□□□ -0.27
CCDC47-202ENST00000403162 MGAM2Q2M2H8 2515 aa13.34□□□□□ -0.27
CCDC47-202ENST00000403162 Q8NAQ8 132 aa13.33□□□□□ -0.28
CCDC47-202ENST00000403162 NBEAL2Q6ZNJ1 2754 aa13.33□□□□□ -0.28
CCDC47-202ENST00000403162 TRAV23DV6A0A075B6W5 121 aa13.32□□□□□ -0.28
CCDC47-202ENST00000403162 LAMTOR3Q9UHA4 124 aa13.32□□□□□ -0.28
CCDC47-202ENST00000403162 NOTCH1P46531 2555 aa13.32□□□□□ -0.28
CCDC47-202ENST00000403162 DNAH3Q8TD57 4116 aa13.32□□□□□ -0.28
CCDC47-202ENST00000403162 DNHD1Q96M86 4753 aa13.31□□□□□ -0.28
CCDC47-202ENST00000403162 MIFP14174 115 aa13.31□□□□□ -0.28
CCDC47-202ENST00000403162 DPH3Q96FX2 82 aa13.3□□□□□ -0.28
CCDC47-202ENST00000403162 PDE6GP18545 87 aa13.3□□□□□ -0.28
CCDC47-202ENST00000403162 Q6ZQY7 126 aa13.3□□□□□ -0.28
CCDC47-202ENST00000403162 FAM19A5Q7Z5A7 132 aaPredicted RBP13.29□□□□□ -0.28
CCDC47-202ENST00000403162 KLK12Q9UKR0 248 aa13.29□□□□□ -0.28
CCDC47-202ENST00000403162 K7EIL1 84 aa13.28□□□□□ -0.28
CCDC47-202ENST00000403162 DSCR8Q96T75 97 aa13.28□□□□□ -0.28
CCDC47-202ENST00000403162 BCE1O60756 84 aa13.28□□□□□ -0.28
CCDC47-202ENST00000403162 SPART-AS1P0CW21 52 aa13.28□□□□□ -0.28
CCDC47-202ENST00000403162 NBEAL1Q6ZS30 2694 aa13.28□□□□□ -0.28
CCDC47-202ENST00000403162 DIRC1Q969H9 104 aa13.27□□□□□ -0.29
CCDC47-202ENST00000403162 C6orf48Q9UBA6 75 aa13.27□□□□□ -0.29
CCDC47-202ENST00000403162 M0R2N4 97 aa13.26□□□□□ -0.29
CCDC47-202ENST00000403162 NDUFC2-KCTD14E9PQ53 114 aa13.25□□□□□ -0.29
CCDC47-202ENST00000403162 LINC01547P58512 204 aaPredicted RBP13.25□□□□□ -0.29
CCDC47-202ENST00000403162 HTN3P15516 51 aa13.25□□□□□ -0.29
CCDC47-202ENST00000403162 Q6ZVQ6 151 aa13.25□□□□□ -0.29
CCDC47-202ENST00000403162 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.24□□□□□ -0.29
CCDC47-202ENST00000403162 TRBV7-6A0A0J9YX20 115 aa13.21□□□□□ -0.29
CCDC47-202ENST00000403162 ZNF73O43830 326 aaPredicted RBP13.21□□□□□ -0.29
CCDC47-202ENST00000403162 CXCL6P80162 114 aa13.21□□□□□ -0.29
CCDC47-202ENST00000403162 XAGE1AQ9HD64 81 aa13.21□□□□□ -0.29
CCDC47-202ENST00000403162 RETNQ9HD89 108 aa13.21□□□□□ -0.29
CCDC47-202ENST00000403162 TRBV7-4A0A0J9YYF1 115 aa13.2□□□□□ -0.3
CCDC47-202ENST00000403162 COX7BP24311 80 aa13.2□□□□□ -0.3
CCDC47-202ENST00000403162 ELOF1P60002 83 aaKnown RBP13.2□□□□□ -0.3
CCDC47-202ENST00000403162 MRAPQ8TCY5 172 aa13.2□□□□□ -0.3
CCDC47-202ENST00000403162 TRAV7A0A075B6U4 112 aa13.2□□□□□ -0.3
CCDC47-202ENST00000403162 HAMPP81172 84 aa13.2□□□□□ -0.3
CCDC47-202ENST00000403162 C20orf197Q8N268 126 aa13.18□□□□□ -0.3
CCDC47-202ENST00000403162 OXTP01178 125 aa13.17□□□□□ -0.3
CCDC47-202ENST00000403162 VPREB1P12018 145 aa13.17□□□□□ -0.3
CCDC47-202ENST00000403162 CAMK2N2Q96S95 79 aa13.14□□□□□ -0.31
CCDC47-202ENST00000403162 M0R378 163 aa13.13□□□□□ -0.31
CCDC47-202ENST00000403162 KRTAP26-1Q6PEX3 210 aa13.13□□□□□ -0.31
CCDC47-202ENST00000403162 HIGD2BQ4VC39 106 aa13.12□□□□□ -0.31
CCDC47-202ENST00000403162 C5orf47Q569G3 176 aa13.11□□□□□ -0.31
CCDC47-202ENST00000403162 TRAV10A0A0B4J240 114 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms