RNA–Protein interactions for RNA: ENST00000402271.5

HDAC11-203, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-203ENST00000402271 SVBPQ8N300 66 aa11.29□□□□□ -0.6
HDAC11-203ENST00000402271 TRAV12-1A0A0B4J245 112 aa11.27□□□□□ -0.61
HDAC11-203ENST00000402271 NDUFA5Q16718 116 aa11.27□□□□□ -0.61
HDAC11-203ENST00000402271 LINC00304Q8N9R0 145 aa11.27□□□□□ -0.61
HDAC11-203ENST00000402271 CHCHD1Q96BP2 118 aaKnown RBP11.27□□□□□ -0.61
HDAC11-203ENST00000402271 IGKV2D-26A0A0A0MRZ7 120 aa11.26□□□□□ -0.61
HDAC11-203ENST00000402271 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
HDAC11-203ENST00000402271 YPEL4Q96NS1 127 aa11.26□□□□□ -0.61
HDAC11-203ENST00000402271 MUC2Q02817 5179 aa11.25□□□□□ -0.61
HDAC11-203ENST00000402271 LINC00158P58513 81 aa11.25□□□□□ -0.61
HDAC11-203ENST00000402271 PLEKHB2Q96CS7 222 aa11.25□□□□□ -0.61
HDAC11-203ENST00000402271 CTAG1AP78358 180 aa11.24□□□□□ -0.61
HDAC11-203ENST00000402271 IFI27L1Q96BM0 104 aa11.24□□□□□ -0.61
HDAC11-203ENST00000402271 CBLN2Q8IUK8 224 aa11.23□□□□□ -0.61
HDAC11-203ENST00000402271 A0A0U1RRA0 63 aa11.2□□□□□ -0.62
HDAC11-203ENST00000402271 RETNLBQ9BQ08 111 aa11.2□□□□□ -0.62
HDAC11-203ENST00000402271 HIGD2AQ9BW72 106 aa11.2□□□□□ -0.62
HDAC11-203ENST00000402271 SMIM13P0DJ93 91 aa11.19□□□□□ -0.62
HDAC11-203ENST00000402271 PRYO14603 147 aa11.17□□□□□ -0.62
HDAC11-203ENST00000402271 HERV-K104P63124 156 aa11.17□□□□□ -0.62
HDAC11-203ENST00000402271 C3orf22Q8N5N4 141 aa11.17□□□□□ -0.62
HDAC11-203ENST00000402271 SPRR4Q96PI1 79 aa11.17□□□□□ -0.62
HDAC11-203ENST00000402271 ATP6V1G1O75348 118 aa11.16□□□□□ -0.62
HDAC11-203ENST00000402271 HSBP1O75506 76 aa11.16□□□□□ -0.62
HDAC11-203ENST00000402271 MEIG1Q5JSS6 88 aa11.16□□□□□ -0.62
HDAC11-203ENST00000402271 BOD1L2Q8IYS8 172 aa11.16□□□□□ -0.62
HDAC11-203ENST00000402271 MIR7-3HGQ8N6C7 128 aa11.16□□□□□ -0.62
HDAC11-203ENST00000402271 A0A0U1RQV1 116 aa11.15□□□□□ -0.62
HDAC11-203ENST00000402271 LINC00587B1AMM8 73 aa11.15□□□□□ -0.62
HDAC11-203ENST00000402271 SPRR1AP35321 89 aa11.15□□□□□ -0.62
HDAC11-203ENST00000402271 TPRXLQ17RH7 258 aa11.15□□□□□ -0.62
HDAC11-203ENST00000402271 FAM19A2Q8N3H0 131 aa11.15□□□□□ -0.62
HDAC11-203ENST00000402271 LINC00337Q8N6G1 96 aa11.14□□□□□ -0.63
HDAC11-203ENST00000402271 KCNQ1DNQ9H478 68 aa11.14□□□□□ -0.63
HDAC11-203ENST00000402271 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
HDAC11-203ENST00000402271 ZNF706Q9Y5V0 76 aaPredicted RBP11.13□□□□□ -0.63
HDAC11-203ENST00000402271 IGLV7-46A0A075B6I9 117 aa11.12□□□□□ -0.63
HDAC11-203ENST00000402271 MYMXA0A1B0GTQ4 84 aa11.12□□□□□ -0.63
HDAC11-203ENST00000402271 KRTAP4-16G5E9R7 235 aaPredicted RBP11.12□□□□□ -0.63
HDAC11-203ENST00000402271 NCR3O14931 201 aa11.12□□□□□ -0.63
HDAC11-203ENST00000402271 SPAG11AQ6PDA7 123 aa11.12□□□□□ -0.63
HDAC11-203ENST00000402271 MAP1LC3CQ9BXW4 147 aa11.11□□□□□ -0.63
HDAC11-203ENST00000402271 CDIP1Q9H305 208 aa11.09□□□□□ -0.63
HDAC11-203ENST00000402271 MUC17Q685J3 4493 aa11.08□□□□□ -0.64
HDAC11-203ENST00000402271 LOC107984156A0A0G2JMH3 177 aa11.08□□□□□ -0.64
HDAC11-203ENST00000402271 TRBV10-3A0A0K0K1G6 114 aa11.08□□□□□ -0.64
HDAC11-203ENST00000402271 LEPROTL1O95214 131 aa11.08□□□□□ -0.64
HDAC11-203ENST00000402271 TRGC2P03986 189 aa11.08□□□□□ -0.64
HDAC11-203ENST00000402271 LINC00310P59036 64 aa11.08□□□□□ -0.64
HDAC11-203ENST00000402271 TSPEAR-AS2P59090 65 aa11.08□□□□□ -0.64
HDAC11-203ENST00000402271 ARL17AQ8IVW1 177 aa11.08□□□□□ -0.64
HDAC11-203ENST00000402271 ETDCA0A1B0GVM5 59 aa11.07□□□□□ -0.64
HDAC11-203ENST00000402271 H0Y8G0 127 aa11.07□□□□□ -0.64
HDAC11-203ENST00000402271 LEPROTO15243 131 aa11.07□□□□□ -0.64
HDAC11-203ENST00000402271 SMCR5Q8TEV8 140 aa11.07□□□□□ -0.64
HDAC11-203ENST00000402271 PLNP26678 52 aa11.06□□□□□ -0.64
HDAC11-203ENST00000402271 SERF1AO75920 110 aa11.05□□□□□ -0.64
HDAC11-203ENST00000402271 PPDPFQ9H3Y8 114 aa11.05□□□□□ -0.64
HDAC11-203ENST00000402271 S100A12P80511 92 aa11.04□□□□□ -0.64
HDAC11-203ENST00000402271 LINC00483Q53H64 154 aa11.04□□□□□ -0.64
HDAC11-203ENST00000402271 C4orf48Q5BLP8 95 aa11.04□□□□□ -0.64
HDAC11-203ENST00000402271 TRBV10-2A0A0K0K1G8 114 aa11.03□□□□□ -0.64
HDAC11-203ENST00000402271 FP248Q71RG6 208 aaPredicted RBP11.03□□□□□ -0.64
HDAC11-203ENST00000402271 DAND5Q8N907 189 aa11.03□□□□□ -0.64
HDAC11-203ENST00000402271 Q8NBF4 154 aa11.03□□□□□ -0.64
HDAC11-203ENST00000402271 B5MCH6 92 aa11.02□□□□□ -0.65
HDAC11-203ENST00000402271 J3QQQ9 107 aa11.02□□□□□ -0.65
HDAC11-203ENST00000402271 HSPB8Q9UJY1 196 aa11.02□□□□□ -0.65
HDAC11-203ENST00000402271 DPM2O94777 84 aa11.01□□□□□ -0.65
HDAC11-203ENST00000402271 NMUP48645 174 aa11.01□□□□□ -0.65
HDAC11-203ENST00000402271 DDTP30046 118 aa11□□□□□ -0.65
HDAC11-203ENST00000402271 HERVK_113P61574 105 aa11□□□□□ -0.65
HDAC11-203ENST00000402271 FAT4Q6V0I7 4981 aa10.99□□□□□ -0.65
HDAC11-203ENST00000402271 SPINK1P00995 79 aa10.99□□□□□ -0.65
HDAC11-203ENST00000402271 LCE2AQ5TA79 106 aaPredicted RBP10.99□□□□□ -0.65
HDAC11-203ENST00000402271 SPANXB1Q9NS25 103 aaPredicted RBP10.99□□□□□ -0.65
HDAC11-203ENST00000402271 NDUFC2O95298 119 aa10.98□□□□□ -0.65
HDAC11-203ENST00000402271 IGKCP01834 107 aa10.98□□□□□ -0.65
HDAC11-203ENST00000402271 FABP4P15090 132 aa10.98□□□□□ -0.65
HDAC11-203ENST00000402271 ERC2-IT1O76042 136 aa10.97□□□□□ -0.65
HDAC11-203ENST00000402271 LGALS3P17931 250 aaKnown RBP10.97□□□□□ -0.65
HDAC11-203ENST00000402271 GAGE2AQ6NT46 116 aa10.97□□□□□ -0.65
HDAC11-203ENST00000402271 PMCHL2Q9BQD1 86 aa10.97□□□□□ -0.65
HDAC11-203ENST00000402271 Q9BRP9 147 aa10.97□□□□□ -0.65
HDAC11-203ENST00000402271 MIEN1Q9BRT3 115 aa10.97□□□□□ -0.65
HDAC11-203ENST00000402271 Q6ZRX8 168 aa10.96□□□□□ -0.65
HDAC11-203ENST00000402271 IGLV6-57P01721 117 aa10.95□□□□□ -0.66
HDAC11-203ENST00000402271 COLCA2A8K830 154 aa10.94□□□□□ -0.66
HDAC11-203ENST00000402271 KRTAP13-3Q3SY46 172 aa10.94□□□□□ -0.66
HDAC11-203ENST00000402271 SSBP3-AS1Q7Z2R9 100 aa10.94□□□□□ -0.66
HDAC11-203ENST00000402271 RPS29P62273 56 aaKnown RBP10.93□□□□□ -0.66
HDAC11-203ENST00000402271 S100A7L2Q5SY68 101 aa10.93□□□□□ -0.66
HDAC11-203ENST00000402271 MOBPQ13875 183 aa10.92□□□□□ -0.66
HDAC11-203ENST00000402271 SOSTDC1Q6X4U4 206 aa10.92□□□□□ -0.66
HDAC11-203ENST00000402271 TRAV23DV6A0A075B6W5 121 aa10.91□□□□□ -0.66
HDAC11-203ENST00000402271 IGLV9-49A0A0B4J1Y8 123 aa10.91□□□□□ -0.66
HDAC11-203ENST00000402271 A0A0J9YXY3 114 aa10.91□□□□□ -0.66
HDAC11-203ENST00000402271 E9PLD3 99 aa10.91□□□□□ -0.66
HDAC11-203ENST00000402271 EIF4EBP3O60516 100 aaPredicted RBP10.9□□□□□ -0.66
HDAC11-203ENST00000402271 ADAMTSL4-AS1Q5T5F5 129 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms