RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 H0YGX0 51 aa5.34□□□□□ -1.55
HDAC9-201ENST00000401921 VWFP04275 2813 aa5.33□□□□□ -1.56
HDAC9-201ENST00000401921 IGKV2-28A0A075B6P5 120 aa5.33□□□□□ -1.56
HDAC9-201ENST00000401921 IGKV2D-28P01615 120 aa5.33□□□□□ -1.56
HDAC9-201ENST00000401921 RPL28P46779 137 aaKnown RBP5.33□□□□□ -1.56
HDAC9-201ENST00000401921 A0A087WVE0 104 aa5.33□□□□□ -1.56
HDAC9-201ENST00000401921 FAM19A3Q7Z5A8 133 aa5.33□□□□□ -1.56
HDAC9-201ENST00000401921 CELA1Q9UNI1 258 aa5.33□□□□□ -1.56
HDAC9-201ENST00000401921 USP17L23D6RBM5 183 aa5.33□□□□□ -1.56
HDAC9-201ENST00000401921 HIST1H4AP62805 103 aaKnown RBP5.33□□□□□ -1.56
HDAC9-201ENST00000401921 SPAG11BQ08648 103 aa5.33□□□□□ -1.56
HDAC9-201ENST00000401921 CD164L2Q6UWJ8 174 aa5.32□□□□□ -1.56
HDAC9-201ENST00000401921 ORMDL1Q9P0S3 153 aa5.32□□□□□ -1.56
HDAC9-201ENST00000401921 PDZD2O15018 2839 aa5.32□□□□□ -1.56
HDAC9-201ENST00000401921 A0A1B0GUV1 79 aa5.31□□□□□ -1.56
HDAC9-201ENST00000401921 Q8IZM0 81 aa5.31□□□□□ -1.56
HDAC9-201ENST00000401921 NDUFC2O95298 119 aa5.31□□□□□ -1.56
HDAC9-201ENST00000401921 IGHV4-30-4P0DP06 118 aa5.31□□□□□ -1.56
HDAC9-201ENST00000401921 C6orf223Q8N319 242 aa5.31□□□□□ -1.56
HDAC9-201ENST00000401921 UPK3BQ9BT76 320 aa5.31□□□□□ -1.56
HDAC9-201ENST00000401921 UNQ6190/PRO20217Q6UXQ8 127 aa5.31□□□□□ -1.56
HDAC9-201ENST00000401921 C20orf197Q8N268 126 aa5.31□□□□□ -1.56
HDAC9-201ENST00000401921 LAMTOR3Q9UHA4 124 aa5.31□□□□□ -1.56
HDAC9-201ENST00000401921 XAGE1AQ9HD64 81 aa5.3□□□□□ -1.56
HDAC9-201ENST00000401921 MAST4O15021 2626 aa5.3□□□□□ -1.56
HDAC9-201ENST00000401921 ZNF561-AS1K7EIQ3 104 aa5.3□□□□□ -1.56
HDAC9-201ENST00000401921 HIGD2BQ4VC39 106 aa5.3□□□□□ -1.56
HDAC9-201ENST00000401921 C6orf99Q4VX62 202 aa5.3□□□□□ -1.56
HDAC9-201ENST00000401921 MIFP14174 115 aa5.29□□□□□ -1.56
HDAC9-201ENST00000401921 RETNQ9HD89 108 aa5.29□□□□□ -1.56
HDAC9-201ENST00000401921 SERP1Q9Y6X1 66 aa5.29□□□□□ -1.56
HDAC9-201ENST00000401921 NSD1Q96L73 2696 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-201ENST00000401921 HIVEP1P15822 2718 aa5.29□□□□□ -1.56
HDAC9-201ENST00000401921 GHRHP01286 108 aa5.29□□□□□ -1.56
HDAC9-201ENST00000401921 NDUFC2-KCTD14E9PQ53 114 aa5.29□□□□□ -1.56
HDAC9-201ENST00000401921 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
HDAC9-201ENST00000401921 OTOGQ6ZRI0 2925 aa5.29□□□□□ -1.56
HDAC9-201ENST00000401921 TENM1Q9UKZ4 2725 aa5.28□□□□□ -1.56
HDAC9-201ENST00000401921 NOTCH1P46531 2555 aa5.28□□□□□ -1.56
HDAC9-201ENST00000401921 CYSRT1A8MQ03 144 aa5.28□□□□□ -1.56
HDAC9-201ENST00000401921 STAB1Q9NY15 2570 aa5.28□□□□□ -1.56
HDAC9-201ENST00000401921 SMIM26A0A096LP01 95 aa5.28□□□□□ -1.56
HDAC9-201ENST00000401921 C10orf25Q5T742 122 aa5.27□□□□□ -1.57
HDAC9-201ENST00000401921 LELP1Q5T871 98 aa5.27□□□□□ -1.57
HDAC9-201ENST00000401921 CAMK2N2Q96S95 79 aa5.27□□□□□ -1.57
HDAC9-201ENST00000401921 Q6JHZ5 121 aa5.27□□□□□ -1.57
HDAC9-201ENST00000401921 IGKV2D-24A0A075B6R9 120 aa5.26□□□□□ -1.57
HDAC9-201ENST00000401921 TRAV23DV6A0A075B6W5 121 aa5.26□□□□□ -1.57
HDAC9-201ENST00000401921 C9orf129Q5T035 196 aaKnown RBP5.26□□□□□ -1.57
HDAC9-201ENST00000401921 RBM3P98179 157 aaKnown RBP5.26□□□□□ -1.57
HDAC9-201ENST00000401921 LINC00612Q8N6U2 182 aa5.26□□□□□ -1.57
HDAC9-201ENST00000401921 KPRPQ5T749 579 aaPredicted RBP5.26□□□□□ -1.57
HDAC9-201ENST00000401921 Q8NAQ8 132 aa5.26□□□□□ -1.57
HDAC9-201ENST00000401921 TMEM256-PLSCR3K7ERE1 68 aa5.24□□□□□ -1.57
HDAC9-201ENST00000401921 KIAA0087Q14695 138 aa5.24□□□□□ -1.57
HDAC9-201ENST00000401921 WFDC10BQ8IUB3 73 aa5.24□□□□□ -1.57
HDAC9-201ENST00000401921 LINC00846Q9NV44 126 aa5.24□□□□□ -1.57
HDAC9-201ENST00000401921 COX17Q14061 63 aa5.24□□□□□ -1.57
HDAC9-201ENST00000401921 Q6ZTC4 211 aa5.24□□□□□ -1.57
HDAC9-201ENST00000401921 Q8N814 137 aa5.24□□□□□ -1.57
HDAC9-201ENST00000401921 LYPD5Q6UWN5 251 aa5.24□□□□□ -1.57
HDAC9-201ENST00000401921 JMJD7-PLA2G4BH0Y9G9 81 aa5.23□□□□□ -1.57
HDAC9-201ENST00000401921 HAMPP81172 84 aa5.23□□□□□ -1.57
HDAC9-201ENST00000401921 AKAP9Q99996 3911 aa5.23□□□□□ -1.57
HDAC9-201ENST00000401921 PRB2P02812 416 aaPredicted RBP5.23□□□□□ -1.57
HDAC9-201ENST00000401921 Q6ZQY7 126 aa5.22□□□□□ -1.57
HDAC9-201ENST00000401921 WFDC9Q8NEX5 89 aa5.22□□□□□ -1.57
HDAC9-201ENST00000401921 UBL5Q9BZL1 73 aa5.22□□□□□ -1.57
HDAC9-201ENST00000401921 NANOS2P60321 138 aaKnown RBP5.22□□□□□ -1.57
HDAC9-201ENST00000401921 ENHOQ6UWT2 76 aa5.22□□□□□ -1.57
HDAC9-201ENST00000401921 FP248Q71RG6 208 aaPredicted RBP5.22□□□□□ -1.57
HDAC9-201ENST00000401921 MPLKIPQ8TAP9 179 aa5.22□□□□□ -1.57
HDAC9-201ENST00000401921 LINC00474Q9P2X8 69 aa5.22□□□□□ -1.57
HDAC9-201ENST00000401921 COL6A5A8TX70 2615 aa5.21□□□□□ -1.57
HDAC9-201ENST00000401921 DEFB131BA0A096LNP1 70 aa5.21□□□□□ -1.57
HDAC9-201ENST00000401921 TRBV10-3A0A0K0K1G6 114 aa5.21□□□□□ -1.57
HDAC9-201ENST00000401921 DIRC1Q969H9 104 aa5.21□□□□□ -1.57
HDAC9-201ENST00000401921 A0A0J9YWU9 116 aa5.21□□□□□ -1.58
HDAC9-201ENST00000401921 C22orf24Q9Y442 160 aa5.21□□□□□ -1.58
HDAC9-201ENST00000401921 SNURFQ9Y675 71 aa5.21□□□□□ -1.58
HDAC9-201ENST00000401921 NBEAL1Q6ZS30 2694 aa5.2□□□□□ -1.58
HDAC9-201ENST00000401921 C11orf45Q8TAV5 145 aa5.2□□□□□ -1.58
HDAC9-201ENST00000401921 H7BZZ5 65 aa5.2□□□□□ -1.58
HDAC9-201ENST00000401921 DEFB105AQ8NG35 78 aa5.2□□□□□ -1.58
HDAC9-201ENST00000401921 TRBV7-6A0A0J9YX20 115 aa5.19□□□□□ -1.58
HDAC9-201ENST00000401921 F8WEM9 126 aa5.19□□□□□ -1.58
HDAC9-201ENST00000401921 CCKP06307 115 aa5.19□□□□□ -1.58
HDAC9-201ENST00000401921 PMAIP1Q13794 54 aa5.19□□□□□ -1.58
HDAC9-201ENST00000401921 FAM19A1Q7Z5A9 133 aa5.19□□□□□ -1.58
HDAC9-201ENST00000401921 C6orf48Q9UBA6 75 aa5.19□□□□□ -1.58
HDAC9-201ENST00000401921 MGAM2Q2M2H8 2515 aa5.19□□□□□ -1.58
HDAC9-201ENST00000401921 NKAPP1Q8N9T2 125 aa5.19□□□□□ -1.58
HDAC9-201ENST00000401921 LINC00575Q6W349 94 aa5.19□□□□□ -1.58
HDAC9-201ENST00000401921 Q8NDZ9 215 aa5.19□□□□□ -1.58
HDAC9-201ENST00000401921 ANK3Q12955 4377 aaKnown RBP5.18□□□□□ -1.58
HDAC9-201ENST00000401921 COX7BP24311 80 aa5.18□□□□□ -1.58
HDAC9-201ENST00000401921 Q6ZRU5 148 aa5.18□□□□□ -1.58
HDAC9-201ENST00000401921 TRRAPQ9Y4A5 3859 aa5.18□□□□□ -1.58
HDAC9-201ENST00000401921 EPM2AB3EWF7 344 aa5.18□□□□□ -1.58
HDAC9-201ENST00000401921 ESRGQ1W209 222 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms