RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 A0A096LNJ9 63 aa6.72□□□□□ -1.33
LINC00544-201ENST00000400540 NDUFA6P56556 154 aa6.72□□□□□ -1.33
LINC00544-201ENST00000400540 COX17Q14061 63 aa6.72□□□□□ -1.33
LINC00544-201ENST00000400540 ASB16-AS1Q495Z4 193 aa6.72□□□□□ -1.33
LINC00544-201ENST00000400540 FA2HQ7L5A8 372 aa6.72□□□□□ -1.33
LINC00544-201ENST00000400540 LINC00337Q8N6G1 96 aa6.72□□□□□ -1.33
LINC00544-201ENST00000400540 Q8NBF4 154 aa6.72□□□□□ -1.33
LINC00544-201ENST00000400540 GNB1LQ9BYB4 327 aa6.72□□□□□ -1.33
LINC00544-201ENST00000400540 SMCO4Q9NRQ5 59 aa6.71□□□□□ -1.34
LINC00544-201ENST00000400540 LINC01547P58512 204 aaPredicted RBP6.7□□□□□ -1.34
LINC00544-201ENST00000400540 TRAV9-1A0A075B6T8 112 aa6.69□□□□□ -1.34
LINC00544-201ENST00000400540 A0A0U1RRA0 63 aa6.69□□□□□ -1.34
LINC00544-201ENST00000400540 C11orf86A6NJI1 115 aa6.69□□□□□ -1.34
LINC00544-201ENST00000400540 URB1-AS1Q96HZ7 61 aa6.69□□□□□ -1.34
LINC00544-201ENST00000400540 PMCHL1Q16048 86 aa6.68□□□□□ -1.34
LINC00544-201ENST00000400540 ZNF706Q9Y5V0 76 aaPredicted RBP6.68□□□□□ -1.34
LINC00544-201ENST00000400540 LINC00158P58513 81 aa6.67□□□□□ -1.34
LINC00544-201ENST00000400540 FABP9Q0Z7S8 132 aa6.67□□□□□ -1.34
LINC00544-201ENST00000400540 TMEM170BQ5T4T1 132 aa6.67□□□□□ -1.34
LINC00544-201ENST00000400540 LCE2CQ5TA81 110 aa6.67□□□□□ -1.34
LINC00544-201ENST00000400540 SMCR5Q8TEV8 140 aa6.67□□□□□ -1.34
LINC00544-201ENST00000400540 PRYO14603 147 aa6.66□□□□□ -1.34
LINC00544-201ENST00000400540 NCR3O14931 201 aa6.66□□□□□ -1.34
LINC00544-201ENST00000400540 HBDP02042 147 aa6.65□□□□□ -1.34
LINC00544-201ENST00000400540 S100PP25815 95 aa6.65□□□□□ -1.34
LINC00544-201ENST00000400540 SPRR1AP35321 89 aa6.65□□□□□ -1.34
LINC00544-201ENST00000400540 SEC61BP60468 96 aaKnown RBP6.65□□□□□ -1.34
LINC00544-201ENST00000400540 CRCT1Q9UGL9 99 aa6.65□□□□□ -1.34
LINC00544-201ENST00000400540 TMEM218A2RU14 115 aa6.64□□□□□ -1.35
LINC00544-201ENST00000400540 KRTAP4-16G5E9R7 235 aaPredicted RBP6.64□□□□□ -1.35
LINC00544-201ENST00000400540 SPINK1P00995 79 aa6.64□□□□□ -1.35
LINC00544-201ENST00000400540 SMIM13P0DJ93 91 aa6.64□□□□□ -1.35
LINC00544-201ENST00000400540 LINC00483Q53H64 154 aa6.64□□□□□ -1.35
LINC00544-201ENST00000400540 SFTA2Q6UW10 78 aa6.64□□□□□ -1.35
LINC00544-201ENST00000400540 BAGE3Q86Y29 109 aa6.64□□□□□ -1.35
LINC00544-201ENST00000400540 C18orf32Q8TCD1 76 aa6.64□□□□□ -1.35
LINC00544-201ENST00000400540 IGLV9-49A0A0B4J1Y8 123 aa6.63□□□□□ -1.35
LINC00544-201ENST00000400540 MOBPQ13875 183 aa6.63□□□□□ -1.35
LINC00544-201ENST00000400540 CLLU1Q5K131 121 aa6.63□□□□□ -1.35
LINC00544-201ENST00000400540 BOD1L2Q8IYS8 172 aa6.63□□□□□ -1.35
LINC00544-201ENST00000400540 Q8N377 158 aa6.63□□□□□ -1.35
LINC00544-201ENST00000400540 KCNQ1DNQ9H478 68 aa6.63□□□□□ -1.35
LINC00544-201ENST00000400540 ETDCA0A1B0GVM5 59 aa6.62□□□□□ -1.35
LINC00544-201ENST00000400540 TMEM223A0PJW6 202 aa6.62□□□□□ -1.35
LINC00544-201ENST00000400540 ERC2-IT1O76042 136 aa6.62□□□□□ -1.35
LINC00544-201ENST00000400540 LINC00614P0C842 121 aa6.62□□□□□ -1.35
LINC00544-201ENST00000400540 COX19Q49B96 90 aa6.62□□□□□ -1.35
LINC00544-201ENST00000400540 GAGE2AQ6NT46 116 aa6.62□□□□□ -1.35
LINC00544-201ENST00000400540 TRBV10-3A0A0K0K1G6 114 aa6.61□□□□□ -1.35
LINC00544-201ENST00000400540 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
LINC00544-201ENST00000400540 CHTOPQ9Y3Y2 248 aaKnown RBP6.61□□□□□ -1.35
LINC00544-201ENST00000400540 MEIG1Q5JSS6 88 aa6.6□□□□□ -1.35
LINC00544-201ENST00000400540 XP32Q5T750 250 aa6.6□□□□□ -1.35
LINC00544-201ENST00000400540 UQCC3Q6UW78 93 aa6.6□□□□□ -1.35
LINC00544-201ENST00000400540 SEC11CQ9BY50 192 aa6.6□□□□□ -1.35
LINC00544-201ENST00000400540 NDUFA12Q9UI09 145 aa6.6□□□□□ -1.35
LINC00544-201ENST00000400540 B5MCH6 92 aa6.59□□□□□ -1.35
LINC00544-201ENST00000400540 ATP6V1G1O75348 118 aa6.58□□□□□ -1.36
LINC00544-201ENST00000400540 RPS29P62273 56 aaKnown RBP6.58□□□□□ -1.36
LINC00544-201ENST00000400540 KRTAP19-2Q3LHN2 52 aa6.58□□□□□ -1.36
LINC00544-201ENST00000400540 FAM19A2Q8N3H0 131 aa6.58□□□□□ -1.36
LINC00544-201ENST00000400540 Q9BRP9 147 aa6.58□□□□□ -1.36
LINC00544-201ENST00000400540 TRAPPC1Q9Y5R8 145 aa6.58□□□□□ -1.36
LINC00544-201ENST00000400540 RPS10P5Q9NQ39 176 aa6.57□□□□□ -1.36
LINC00544-201ENST00000400540 SLC25A20O43772 301 aa6.56□□□□□ -1.36
LINC00544-201ENST00000400540 SSBP3-AS1Q7Z2R9 100 aa6.56□□□□□ -1.36
LINC00544-201ENST00000400540 A6NJY4 79 aa6.55□□□□□ -1.36
LINC00544-201ENST00000400540 MT1HP80294 61 aa6.55□□□□□ -1.36
LINC00544-201ENST00000400540 TRAV12-1A0A0B4J245 112 aa6.54□□□□□ -1.36
LINC00544-201ENST00000400540 DDTP30046 118 aa6.54□□□□□ -1.36
LINC00544-201ENST00000400540 TSPEAR-AS2P59090 65 aa6.54□□□□□ -1.36
LINC00544-201ENST00000400540 HERV-K104P63124 156 aa6.54□□□□□ -1.36
LINC00544-201ENST00000400540 IFITM2Q01629 132 aa6.54□□□□□ -1.36
LINC00544-201ENST00000400540 RHEBQ15382 184 aa6.54□□□□□ -1.36
LINC00544-201ENST00000400540 C9orf153Q5TBE3 101 aa6.54□□□□□ -1.36
LINC00544-201ENST00000400540 IFI27L1Q96BM0 104 aa6.54□□□□□ -1.36
LINC00544-201ENST00000400540 C10orf91Q5T1B1 145 aa6.53□□□□□ -1.36
LINC00544-201ENST00000400540 Q6ZRX8 168 aa6.53□□□□□ -1.36
LINC00544-201ENST00000400540 FLGP20930 4061 aaPredicted RBP6.52□□□□□ -1.37
LINC00544-201ENST00000400540 S100A12P80511 92 aa6.52□□□□□ -1.37
LINC00544-201ENST00000400540 COMMD7Q86VX2 200 aa6.52□□□□□ -1.37
LINC00544-201ENST00000400540 MYMXA0A1B0GTQ4 84 aa6.51□□□□□ -1.37
LINC00544-201ENST00000400540 PCOTHQ58A44 107 aa6.51□□□□□ -1.37
LINC00544-201ENST00000400540 ST20-AS1Q8NBB2 130 aa6.51□□□□□ -1.37
LINC00544-201ENST00000400540 TRBV10-2A0A0K0K1G8 114 aa6.5□□□□□ -1.37
LINC00544-201ENST00000400540 MAP1LC3CQ9BXW4 147 aa6.5□□□□□ -1.37
LINC00544-201ENST00000400540 IGLV8-61A0A075B6I0 122 aa6.49□□□□□ -1.37
LINC00544-201ENST00000400540 LOC107984156A0A0G2JMH3 177 aa6.49□□□□□ -1.37
LINC00544-201ENST00000400540 LINC00587B1AMM8 73 aa6.49□□□□□ -1.37
LINC00544-201ENST00000400540 H0Y8G0 127 aa6.49□□□□□ -1.37
LINC00544-201ENST00000400540 ARL17AQ8IVW1 177 aa6.49□□□□□ -1.37
LINC00544-201ENST00000400540 TRAV23DV6A0A075B6W5 121 aa6.48□□□□□ -1.37
LINC00544-201ENST00000400540 C9orf92A6NGG3 77 aa6.48□□□□□ -1.37
LINC00544-201ENST00000400540 IGLV6-57P01721 117 aa6.48□□□□□ -1.37
LINC00544-201ENST00000400540 CHCHD1Q96BP2 118 aaKnown RBP6.48□□□□□ -1.37
LINC00544-201ENST00000400540 SPANXB1Q9NS25 103 aaPredicted RBP6.48□□□□□ -1.37
LINC00544-201ENST00000400540 LEPROTO15243 131 aa6.47□□□□□ -1.37
LINC00544-201ENST00000400540 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
LINC00544-201ENST00000400540 S100A7L2Q5SY68 101 aa6.47□□□□□ -1.37
LINC00544-201ENST00000400540 HRCT1Q6UXD1 115 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms