RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 KIAA0087Q14695 138 aa12.84□□□□□ -0.35
USP25-204ENST00000400183 ADAMTS20P59510 1910 aa12.84□□□□□ -0.35
USP25-204ENST00000400183 CRYGAP11844 174 aa12.82□□□□□ -0.36
USP25-204ENST00000400183 MDFIQ99750 246 aa12.81□□□□□ -0.36
USP25-204ENST00000400183 LINC00167Q96N53 147 aa12.81□□□□□ -0.36
USP25-204ENST00000400183 C1orf64Q8NEQ6 169 aa12.81□□□□□ -0.36
USP25-204ENST00000400183 SPATA3Q8NHX4 192 aa12.81□□□□□ -0.36
USP25-204ENST00000400183 IGLV5-45A0A087WSX0 123 aa12.8□□□□□ -0.36
USP25-204ENST00000400183 C6orf48Q9UBA6 75 aa12.8□□□□□ -0.36
USP25-204ENST00000400183 FASNP49327 2511 aaKnown RBP12.8□□□□□ -0.36
USP25-204ENST00000400183 F8P00451 2351 aa12.79□□□□□ -0.36
USP25-204ENST00000400183 H3BNG1 76 aa12.78□□□□□ -0.36
USP25-204ENST00000400183 PRO0628Q9UI54 55 aa12.78□□□□□ -0.36
USP25-204ENST00000400183 IGKV2D-30A0A075B6S6 120 aa12.75□□□□□ -0.37
USP25-204ENST00000400183 IGKV2-30P06310 120 aa12.75□□□□□ -0.37
USP25-204ENST00000400183 SMIM29Q86T20 159 aa12.75□□□□□ -0.37
USP25-204ENST00000400183 C4orf26Q17RF5 130 aa12.74□□□□□ -0.37
USP25-204ENST00000400183 MOBPQ13875 183 aa12.72□□□□□ -0.37
USP25-204ENST00000400183 A0A1B0GW54 56 aa12.72□□□□□ -0.37
USP25-204ENST00000400183 RPS28P62857 69 aaKnown RBP12.72□□□□□ -0.37
USP25-204ENST00000400183 TP53AIP1Q9HCN2 124 aa12.72□□□□□ -0.37
USP25-204ENST00000400183 ELOF1P60002 83 aaKnown RBP12.7□□□□□ -0.38
USP25-204ENST00000400183 SPACA4Q8TDM5 124 aa12.7□□□□□ -0.38
USP25-204ENST00000400183 FAM218AQ96MZ4 157 aa12.7□□□□□ -0.38
USP25-204ENST00000400183 Q9UF83 564 aa12.69□□□□□ -0.38
USP25-204ENST00000400183 BCE1O60756 84 aa12.67□□□□□ -0.38
USP25-204ENST00000400183 POLQO75417 2590 aa12.67□□□□□ -0.38
USP25-204ENST00000400183 Q6ZRX8 168 aa12.65□□□□□ -0.38
USP25-204ENST00000400183 C7orf65Q6ZTY9 151 aa12.65□□□□□ -0.38
USP25-204ENST00000400183 Q8NBF4 154 aa12.65□□□□□ -0.38
USP25-204ENST00000400183 ACANP16112 2415 aa12.64□□□□□ -0.39
USP25-204ENST00000400183 KRTAP24-1Q3LI83 254 aa12.63□□□□□ -0.39
USP25-204ENST00000400183 PHF5AQ7RTV0 110 aaKnown RBP12.62□□□□□ -0.39
USP25-204ENST00000400183 LINC00476Q8WZB0 136 aa12.62□□□□□ -0.39
USP25-204ENST00000400183 Q6ZQT0 140 aa12.61□□□□□ -0.39
USP25-204ENST00000400183 Q8NAQ8 132 aa12.61□□□□□ -0.39
USP25-204ENST00000400183 ACYP2P14621 99 aa12.6□□□□□ -0.39
USP25-204ENST00000400183 LOC110117498A0A087WWA1 95 aa12.6□□□□□ -0.39
USP25-204ENST00000400183 NBDYA0A0U1RRE5 68 aa12.6□□□□□ -0.39
USP25-204ENST00000400183 A0A1B0GU69 56 aa12.6□□□□□ -0.39
USP25-204ENST00000400183 C16orf90A8MZG2 172 aa12.59□□□□□ -0.39
USP25-204ENST00000400183 EPM2AB3EWF7 344 aa12.58□□□□□ -0.4
USP25-204ENST00000400183 PTPRBP23467 1997 aa12.58□□□□□ -0.4
USP25-204ENST00000400183 RTL8CO15255 209 aa12.58□□□□□ -0.4
USP25-204ENST00000400183 LINC00588Q9Y4M8 146 aa12.57□□□□□ -0.4
USP25-204ENST00000400183 CENPFP49454 3210 aa12.57□□□□□ -0.4
USP25-204ENST00000400183 GVQW2A0A096LPI5 108 aaPredicted RBP12.57□□□□□ -0.4
USP25-204ENST00000400183 H3BPC8 53 aa12.57□□□□□ -0.4
USP25-204ENST00000400183 Q6ZRP5 223 aa12.56□□□□□ -0.4
USP25-204ENST00000400183 ANKRD17O75179 2603 aaKnown RBP12.56□□□□□ -0.4
USP25-204ENST00000400183 KLK9Q2XQG4 91 aa12.55□□□□□ -0.4
USP25-204ENST00000400183 ST20-AS1Q8NBB2 130 aa12.53□□□□□ -0.4
USP25-204ENST00000400183 TRAV22A0A0B4J277 110 aa12.52□□□□□ -0.4
USP25-204ENST00000400183 FAM229AH3BQW9 127 aa12.51□□□□□ -0.41
USP25-204ENST00000400183 LINC00313P59037 77 aa12.51□□□□□ -0.41
USP25-204ENST00000400183 TYMSOSQ8TAI1 123 aa12.51□□□□□ -0.41
USP25-204ENST00000400183 COL4A2P08572 1712 aa12.51□□□□□ -0.41
USP25-204ENST00000400183 LITAFQ99732 161 aa12.51□□□□□ -0.41
USP25-204ENST00000400183 CHTF8P0CG12 524 aa12.49□□□□□ -0.41
USP25-204ENST00000400183 DNAH10OSP0CZ25 163 aa12.48□□□□□ -0.41
USP25-204ENST00000400183 TM2D3Q9BRN9 247 aa12.47□□□□□ -0.41
USP25-204ENST00000400183 VPREB1P12018 145 aa12.47□□□□□ -0.41
USP25-204ENST00000400183 SPAG11AQ6PDA7 123 aa12.47□□□□□ -0.41
USP25-204ENST00000400183 COL27A1Q8IZC6 1860 aaPredicted RBP12.46□□□□□ -0.42
USP25-204ENST00000400183 TRBV7-4A0A0J9YYF1 115 aa12.46□□□□□ -0.42
USP25-204ENST00000400183 IGLV6-57P01721 117 aa12.45□□□□□ -0.42
USP25-204ENST00000400183 EP400Q96L91 3159 aa12.43□□□□□ -0.42
USP25-204ENST00000400183 RPL37AP61513 92 aaKnown RBP12.43□□□□□ -0.42
USP25-204ENST00000400183 EPG5Q9HCE0 2579 aa12.42□□□□□ -0.42
USP25-204ENST00000400183 WWC2-AS2Q96NR7 200 aa12.39□□□□□ -0.43
USP25-204ENST00000400183 LOC101927531A0A1B0GV80 90 aa12.38□□□□□ -0.43
USP25-204ENST00000400183 A8MWP4 228 aa12.37□□□□□ -0.43
USP25-204ENST00000400183 C8orf87E5RJ46 101 aa12.37□□□□□ -0.43
USP25-204ENST00000400183 FAM168BA1KXE4 195 aa12.37□□□□□ -0.43
USP25-204ENST00000400183 ATP11AUNQ6ZP68 121 aa12.36□□□□□ -0.43
USP25-204ENST00000400183 Q96NJ1 140 aa12.36□□□□□ -0.43
USP25-204ENST00000400183 CSNK1G2-AS1Q8NCQ2 148 aa12.36□□□□□ -0.43
USP25-204ENST00000400183 IGLV1-50A0A075B6I6 118 aa12.35□□□□□ -0.43
USP25-204ENST00000400183 SERTAD4-AS1Q5TG53 156 aa12.35□□□□□ -0.43
USP25-204ENST00000400183 KCNQ1DNQ9H478 68 aa12.35□□□□□ -0.43
USP25-204ENST00000400183 EIF4EBP3O60516 100 aaPredicted RBP12.33□□□□□ -0.44
USP25-204ENST00000400183 MRPL34Q9BQ48 92 aaKnown RBP12.32□□□□□ -0.44
USP25-204ENST00000400183 K7EQZ3 153 aa12.32□□□□□ -0.44
USP25-204ENST00000400183 LINC00528Q8N1L1 170 aa12.31□□□□□ -0.44
USP25-204ENST00000400183 PLA2G1BP04054 148 aaKnown RBP12.31□□□□□ -0.44
USP25-204ENST00000400183 FLNBO75369 2602 aaKnown RBP12.29□□□□□ -0.44
USP25-204ENST00000400183 IGLV8-61A0A075B6I0 122 aa12.28□□□□□ -0.44
USP25-204ENST00000400183 PRR34Q9NV39 138 aa12.28□□□□□ -0.44
USP25-204ENST00000400183 ERC2-IT1O76042 136 aa12.27□□□□□ -0.44
USP25-204ENST00000400183 USP24Q9UPU5 2620 aa12.27□□□□□ -0.44
USP25-204ENST00000400183 IGFL1Q6UW32 110 aa12.23□□□□□ -0.45
USP25-204ENST00000400183 K7EIL1 84 aa12.23□□□□□ -0.45
USP25-204ENST00000400183 MGAM2Q2M2H8 2515 aa12.23□□□□□ -0.45
USP25-204ENST00000400183 C19orf73Q9NVV2 129 aa12.22□□□□□ -0.45
USP25-204ENST00000400183 C15orf56Q8N910 161 aa12.22□□□□□ -0.45
USP25-204ENST00000400183 LINC00336Q6ZUF6 198 aa12.22□□□□□ -0.45
USP25-204ENST00000400183 KRTAP10-11P60412 298 aa12.21□□□□□ -0.45
USP25-204ENST00000400183 A8MUN3 132 aa12.2□□□□□ -0.46
USP25-204ENST00000400183 KLKP1Q107X0 134 aa12.2□□□□□ -0.46
USP25-204ENST00000400183 LINC01600Q96MT4 127 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms