RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 LIMD2Q9BT23 127 aa9.85□□□□□ -0.83
GABPA-202ENST00000400075 CSNK1G2-AS1Q8NCQ2 148 aa9.85□□□□□ -0.83
GABPA-202ENST00000400075 Q9UF83 564 aa9.84□□□□□ -0.83
GABPA-202ENST00000400075 WFDC13Q8IUB5 93 aa9.84□□□□□ -0.83
GABPA-202ENST00000400075 SEC61GP60059 68 aa9.84□□□□□ -0.83
GABPA-202ENST00000400075 SMCR5Q8TEV8 140 aa9.84□□□□□ -0.83
GABPA-202ENST00000400075 UBR5O95071 2799 aaPredicted RBP9.83□□□□□ -0.84
GABPA-202ENST00000400075 Q8N3U1 123 aa9.83□□□□□ -0.84
GABPA-202ENST00000400075 LINC00336Q6ZUF6 198 aa9.83□□□□□ -0.84
GABPA-202ENST00000400075 SMIM20Q8N5G0 67 aa9.83□□□□□ -0.84
GABPA-202ENST00000400075 URB1-AS1Q96HZ7 61 aa9.83□□□□□ -0.84
GABPA-202ENST00000400075 LINC00643Q86TS7 51 aa9.82□□□□□ -0.84
GABPA-202ENST00000400075 ATOX1O00244 68 aa9.82□□□□□ -0.84
GABPA-202ENST00000400075 CRYGAP11844 174 aa9.81□□□□□ -0.84
GABPA-202ENST00000400075 LINC00167Q96N53 147 aa9.81□□□□□ -0.84
GABPA-202ENST00000400075 TSPEAR-AS2P59090 65 aa9.8□□□□□ -0.84
GABPA-202ENST00000400075 ENHOQ6UWT2 76 aa9.8□□□□□ -0.84
GABPA-202ENST00000400075 C6orf48Q9UBA6 75 aa9.8□□□□□ -0.84
GABPA-202ENST00000400075 FAM19A3Q7Z5A8 133 aa9.8□□□□□ -0.84
GABPA-202ENST00000400075 FAM236AA0A1B0GUQ0 79 aa9.79□□□□□ -0.84
GABPA-202ENST00000400075 FAM236BA0A1B0GV22 79 aa9.79□□□□□ -0.84
GABPA-202ENST00000400075 ADAMTSL4-AS1Q5T5F5 129 aa9.78□□□□□ -0.84
GABPA-202ENST00000400075 Q8N814 137 aa9.78□□□□□ -0.84
GABPA-202ENST00000400075 RPL37AP61513 92 aaKnown RBP9.78□□□□□ -0.84
GABPA-202ENST00000400075 PHF5AQ7RTV0 110 aaKnown RBP9.78□□□□□ -0.84
GABPA-202ENST00000400075 A8MTW9 85 aa9.77□□□□□ -0.85
GABPA-202ENST00000400075 CHTF8P0CG12 524 aa9.77□□□□□ -0.85
GABPA-202ENST00000400075 FAM236DA0A1B0GTK5 79 aa9.77□□□□□ -0.85
GABPA-202ENST00000400075 FAM236CP0DP71 79 aa9.77□□□□□ -0.85
GABPA-202ENST00000400075 SPACA4Q8TDM5 124 aa9.76□□□□□ -0.85
GABPA-202ENST00000400075 A0A087WSZ3 146 aa9.76□□□□□ -0.85
GABPA-202ENST00000400075 ATP5EP2Q5VTU8 51 aa9.76□□□□□ -0.85
GABPA-202ENST00000400075 A0A096LNJ9 63 aa9.76□□□□□ -0.85
GABPA-202ENST00000400075 IGLV5-39A0A0G2JS06 123 aa9.75□□□□□ -0.85
GABPA-202ENST00000400075 TYMSOSQ8TAI1 123 aa9.75□□□□□ -0.85
GABPA-202ENST00000400075 IGHV6-1A0A0B4J1U7 121 aa9.75□□□□□ -0.85
GABPA-202ENST00000400075 GVQW2A0A096LPI5 108 aaPredicted RBP9.74□□□□□ -0.85
GABPA-202ENST00000400075 GIG44P09565 113 aaPredicted RBP9.74□□□□□ -0.85
GABPA-202ENST00000400075 FLNCQ14315 2725 aa9.73□□□□□ -0.85
GABPA-202ENST00000400075 C2orf91Q6ZV80 131 aa9.73□□□□□ -0.85
GABPA-202ENST00000400075 A0A087WYN8 130 aa9.73□□□□□ -0.85
GABPA-202ENST00000400075 MOBPQ13875 183 aa9.72□□□□□ -0.85
GABPA-202ENST00000400075 LINC00310P59036 64 aa9.72□□□□□ -0.85
GABPA-202ENST00000400075 SDIM1Q6ZPB5 146 aa9.72□□□□□ -0.85
GABPA-202ENST00000400075 A0A087WTM6 91 aa9.72□□□□□ -0.85
GABPA-202ENST00000400075 TMEM258P61165 79 aa9.72□□□□□ -0.85
GABPA-202ENST00000400075 APLNQ9ULZ1 77 aa9.71□□□□□ -0.86
GABPA-202ENST00000400075 NSD1Q96L73 2696 aaPredicted RBP9.71□□□□□ -0.86
GABPA-202ENST00000400075 C5orf47Q569G3 176 aa9.71□□□□□ -0.86
GABPA-202ENST00000400075 SMR3BP02814 79 aaPredicted RBP9.7□□□□□ -0.86
GABPA-202ENST00000400075 CFAP54Q96N23 3096 aa9.69□□□□□ -0.86
GABPA-202ENST00000400075 LINC00476Q8WZB0 136 aa9.68□□□□□ -0.86
GABPA-202ENST00000400075 REV3LO60673 3130 aa9.68□□□□□ -0.86
GABPA-202ENST00000400075 LINC00575Q6W349 94 aa9.68□□□□□ -0.86
GABPA-202ENST00000400075 Q6ZVQ6 151 aa9.68□□□□□ -0.86
GABPA-202ENST00000400075 PRR4Q16378 134 aa9.67□□□□□ -0.86
GABPA-202ENST00000400075 J3KT08 172 aa9.67□□□□□ -0.86
GABPA-202ENST00000400075 LAMA2P24043 3122 aaKnown RBP9.66□□□□□ -0.86
GABPA-202ENST00000400075 Q8N9L7 120 aa9.66□□□□□ -0.86
GABPA-202ENST00000400075 STAB2Q8WWQ8 2551 aa9.65□□□□□ -0.86
GABPA-202ENST00000400075 IGLV5-45A0A087WSX0 123 aa9.65□□□□□ -0.86
GABPA-202ENST00000400075 EPM2AB3EWF7 344 aa9.65□□□□□ -0.87
GABPA-202ENST00000400075 CASC10Q5T4H9 136 aa9.65□□□□□ -0.87
GABPA-202ENST00000400075 CR1P17927 2039 aa9.64□□□□□ -0.87
GABPA-202ENST00000400075 LINC00612Q8N6U2 182 aa9.64□□□□□ -0.87
GABPA-202ENST00000400075 BCE1O60756 84 aa9.64□□□□□ -0.87
GABPA-202ENST00000400075 C3orf22Q8N5N4 141 aa9.63□□□□□ -0.87
GABPA-202ENST00000400075 XIRP2A4UGR9 3374 aa9.63□□□□□ -0.87
GABPA-202ENST00000400075 C20orf197Q8N268 126 aa9.61□□□□□ -0.87
GABPA-202ENST00000400075 C9orf163Q8N9P6 203 aa9.61□□□□□ -0.87
GABPA-202ENST00000400075 RETNLBQ9BQ08 111 aa9.61□□□□□ -0.87
GABPA-202ENST00000400075 WIPF1O43516 503 aa9.6□□□□□ -0.87
GABPA-202ENST00000400075 KIAA0087Q14695 138 aa9.6□□□□□ -0.87
GABPA-202ENST00000400075 DEFB116Q30KQ4 102 aa9.6□□□□□ -0.87
GABPA-202ENST00000400075 FAM30AQ9NZY2 134 aa9.6□□□□□ -0.87
GABPA-202ENST00000400075 ITPR2Q14571 2701 aa9.6□□□□□ -0.87
GABPA-202ENST00000400075 PRR34Q9NV39 138 aa9.59□□□□□ -0.87
GABPA-202ENST00000400075 Q8NBF4 154 aa9.59□□□□□ -0.87
GABPA-202ENST00000400075 LINC01547P58512 204 aaPredicted RBP9.58□□□□□ -0.88
GABPA-202ENST00000400075 Q6ZRX8 168 aa9.57□□□□□ -0.88
GABPA-202ENST00000400075 UNC80Q8N2C7 3258 aa9.57□□□□□ -0.88
GABPA-202ENST00000400075 LINC01546A6NGU7 62 aa9.56□□□□□ -0.88
GABPA-202ENST00000400075 Q6Q795 121 aa9.56□□□□□ -0.88
GABPA-202ENST00000400075 ZNF575Q86XF7 245 aa9.56□□□□□ -0.88
GABPA-202ENST00000400075 FRYQ5TBA9 3013 aa9.55□□□□□ -0.88
GABPA-202ENST00000400075 FRYLO94915 3013 aa9.55□□□□□ -0.88
GABPA-202ENST00000400075 ITPR1Q14643 2758 aa9.55□□□□□ -0.88
GABPA-202ENST00000400075 SPTSSBQ8NFR3 76 aa9.54□□□□□ -0.88
GABPA-202ENST00000400075 CDIP1Q9H305 208 aa9.54□□□□□ -0.88
GABPA-202ENST00000400075 SERP1Q9Y6X1 66 aa9.53□□□□□ -0.88
GABPA-202ENST00000400075 DMBT1Q9UGM3 2413 aaPredicted RBP9.53□□□□□ -0.88
GABPA-202ENST00000400075 TNP2Q05952 138 aa9.53□□□□□ -0.88
GABPA-202ENST00000400075 TRBV7-6A0A0J9YX20 115 aa9.53□□□□□ -0.88
GABPA-202ENST00000400075 FAM168BA1KXE4 195 aa9.53□□□□□ -0.88
GABPA-202ENST00000400075 B5MCH6 92 aa9.53□□□□□ -0.88
GABPA-202ENST00000400075 TENM4Q6N022 2769 aa9.52□□□□□ -0.89
GABPA-202ENST00000400075 VPS13AQ96RL7 3174 aa9.52□□□□□ -0.89
GABPA-202ENST00000400075 K7ERS5 55 aa9.52□□□□□ -0.89
GABPA-202ENST00000400075 ELOF1P60002 83 aaKnown RBP9.51□□□□□ -0.89
GABPA-202ENST00000400075 LINC00528Q8N1L1 170 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms