RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 TTC28Q96AY4 2481 aa7.75□□□□□ -1.17
CACNA1C-208ENST00000399601 CDC42SE1Q9NRR8 79 aa7.75□□□□□ -1.17
CACNA1C-208ENST00000399601 NAV3Q8IVL0 2385 aa7.74□□□□□ -1.17
CACNA1C-208ENST00000399601 ST20-AS1Q8NBB2 130 aa7.74□□□□□ -1.17
CACNA1C-208ENST00000399601 IGLV5-39A0A0G2JS06 123 aa7.74□□□□□ -1.17
CACNA1C-208ENST00000399601 LINC00483Q53H64 154 aa7.74□□□□□ -1.17
CACNA1C-208ENST00000399601 Q8N2B8 174 aa7.74□□□□□ -1.17
CACNA1C-208ENST00000399601 DOPEY1Q5JWR5 2465 aa7.74□□□□□ -1.17
CACNA1C-208ENST00000399601 EIF4EBP1Q13541 118 aaPredicted RBP7.73□□□□□ -1.17
CACNA1C-208ENST00000399601 Q6ZSN1 163 aa7.73□□□□□ -1.17
CACNA1C-208ENST00000399601 DNAH12Q6ZR08 3092 aa7.73□□□□□ -1.17
CACNA1C-208ENST00000399601 BRWD1-AS2P59051 145 aa7.73□□□□□ -1.17
CACNA1C-208ENST00000399601 OBSCN-AS1Q96MR7 158 aa7.73□□□□□ -1.17
CACNA1C-208ENST00000399601 KIAA1549LQ6ZVL6 1849 aa7.73□□□□□ -1.17
CACNA1C-208ENST00000399601 M0R2T5 61 aa7.72□□□□□ -1.17
CACNA1C-208ENST00000399601 UQCR11O14957 56 aa7.72□□□□□ -1.17
CACNA1C-208ENST00000399601 KIAA1549Q9HCM3 1950 aa7.72□□□□□ -1.17
CACNA1C-208ENST00000399601 TET2Q6N021 2002 aaPredicted RBP7.72□□□□□ -1.17
CACNA1C-208ENST00000399601 EXPH5Q8NEV8 1989 aa7.72□□□□□ -1.17
CACNA1C-208ENST00000399601 KLLNB2CW77 178 aa7.72□□□□□ -1.17
CACNA1C-208ENST00000399601 MED12LQ86YW9 2145 aa7.72□□□□□ -1.17
CACNA1C-208ENST00000399601 PCDH15Q96QU1 1955 aa7.72□□□□□ -1.17
CACNA1C-208ENST00000399601 TLX1NBP0CAT3 122 aa7.72□□□□□ -1.17
CACNA1C-208ENST00000399601 TM2D3Q9BRN9 247 aa7.71□□□□□ -1.17
CACNA1C-208ENST00000399601 A0A1W2PPR1 153 aa7.71□□□□□ -1.18
CACNA1C-208ENST00000399601 LINC00167Q96N53 147 aa7.71□□□□□ -1.18
CACNA1C-208ENST00000399601 NUP210LQ5VU65 1888 aa7.71□□□□□ -1.18
CACNA1C-208ENST00000399601 RAI1Q7Z5J4 1906 aaPredicted RBP7.71□□□□□ -1.18
CACNA1C-208ENST00000399601 SMR3BP02814 79 aaPredicted RBP7.7□□□□□ -1.18
CACNA1C-208ENST00000399601 LINC00476Q8WZB0 136 aa7.7□□□□□ -1.18
CACNA1C-208ENST00000399601 CACNA1AO00555 2505 aa7.7□□□□□ -1.18
CACNA1C-208ENST00000399601 Q8NBF4 154 aa7.67□□□□□ -1.18
CACNA1C-208ENST00000399601 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
CACNA1C-208ENST00000399601 IGIPA6NJ69 53 aa7.67□□□□□ -1.18
CACNA1C-208ENST00000399601 LINC00336Q6ZUF6 198 aa7.66□□□□□ -1.18
CACNA1C-208ENST00000399601 NAV2Q8IVL1 2488 aa7.66□□□□□ -1.18
CACNA1C-208ENST00000399601 Q8N1X5 172 aa7.66□□□□□ -1.18
CACNA1C-208ENST00000399601 KIF25-AS1Q9Y6Z4 181 aa7.65□□□□□ -1.19
CACNA1C-208ENST00000399601 ARHGAP32A7KAX9 2087 aa7.64□□□□□ -1.19
CACNA1C-208ENST00000399601 PSORS1C2Q9UIG4 136 aa7.64□□□□□ -1.19
CACNA1C-208ENST00000399601 PCNX3Q9H6A9 2034 aa7.64□□□□□ -1.19
CACNA1C-208ENST00000399601 ALPK3Q96L96 1907 aa7.64□□□□□ -1.19
CACNA1C-208ENST00000399601 RBM12B-AS1Q9P1G2 102 aa7.64□□□□□ -1.19
CACNA1C-208ENST00000399601 ANKHD1Q8IWZ3 2542 aaKnown RBP7.64□□□□□ -1.19
CACNA1C-208ENST00000399601 ATG2AQ2TAZ0 1938 aa7.63□□□□□ -1.19
CACNA1C-208ENST00000399601 HCFC1P51610 2035 aa7.63□□□□□ -1.19
CACNA1C-208ENST00000399601 RPS28P62857 69 aaKnown RBP7.62□□□□□ -1.19
CACNA1C-208ENST00000399601 H3BS24 57 aa7.62□□□□□ -1.19
CACNA1C-208ENST00000399601 FAM168BA1KXE4 195 aa7.62□□□□□ -1.19
CACNA1C-208ENST00000399601 PLAC4Q8WY50 150 aa7.62□□□□□ -1.19
CACNA1C-208ENST00000399601 ADAMTS20P59510 1910 aa7.61□□□□□ -1.19
CACNA1C-208ENST00000399601 NCOR2Q9Y618 2525 aa7.61□□□□□ -1.19
CACNA1C-208ENST00000399601 MYO18BQ8IUG5 2567 aa7.59□□□□□ -1.19
CACNA1C-208ENST00000399601 IGLV1-50A0A075B6I6 118 aa7.59□□□□□ -1.19
CACNA1C-208ENST00000399601 PIEZO1Q92508 2521 aa7.59□□□□□ -1.19
CACNA1C-208ENST00000399601 LCA10Q71F78 164 aa7.59□□□□□ -1.2
CACNA1C-208ENST00000399601 MRPL34Q9BQ48 92 aaKnown RBP7.59□□□□□ -1.2
CACNA1C-208ENST00000399601 A0A1B0GUV1 79 aa7.58□□□□□ -1.2
CACNA1C-208ENST00000399601 A0A0G2JQZ4 141 aa7.58□□□□□ -1.2
CACNA1C-208ENST00000399601 A0A1W2PNN7 141 aa7.58□□□□□ -1.2
CACNA1C-208ENST00000399601 LINC00588Q9Y4M8 146 aa7.58□□□□□ -1.2
CACNA1C-208ENST00000399601 LOC101927531A0A1B0GV80 90 aa7.58□□□□□ -1.2
CACNA1C-208ENST00000399601 TRBV7-4A0A0J9YYF1 115 aa7.57□□□□□ -1.2
CACNA1C-208ENST00000399601 C11orf72Q8NBR9 251 aa7.57□□□□□ -1.2
CACNA1C-208ENST00000399601 K7EIL1 84 aa7.57□□□□□ -1.2
CACNA1C-208ENST00000399601 FAM218AQ96MZ4 157 aa7.56□□□□□ -1.2
CACNA1C-208ENST00000399601 ANAPC11Q9NYG5 84 aa7.56□□□□□ -1.2
CACNA1C-208ENST00000399601 LINC00304Q8N9R0 145 aa7.56□□□□□ -1.2
CACNA1C-208ENST00000399601 A0A0A0MQY5 61 aa7.55□□□□□ -1.2
CACNA1C-208ENST00000399601 PTPRSQ13332 1948 aa7.54□□□□□ -1.2
CACNA1C-208ENST00000399601 CEP350Q5VT06 3117 aa7.54□□□□□ -1.2
CACNA1C-208ENST00000399601 CD164Q04900 197 aa7.54□□□□□ -1.2
CACNA1C-208ENST00000399601 H3BNG1 76 aa7.53□□□□□ -1.2
CACNA1C-208ENST00000399601 LRRK2Q5S007 2527 aa7.52□□□□□ -1.21
CACNA1C-208ENST00000399601 A8MWP4 228 aa7.52□□□□□ -1.21
CACNA1C-208ENST00000399601 ELOF1P60002 83 aaKnown RBP7.51□□□□□ -1.21
CACNA1C-208ENST00000399601 URB1-AS1Q96HZ7 61 aa7.51□□□□□ -1.21
CACNA1C-208ENST00000399601 AMELXQ99217 191 aa7.51□□□□□ -1.21
CACNA1C-208ENST00000399601 H3BPC8 53 aa7.5□□□□□ -1.21
CACNA1C-208ENST00000399601 PRO0461Q9UI25 63 aa7.5□□□□□ -1.21
CACNA1C-208ENST00000399601 AGRNO00468 2067 aa7.5□□□□□ -1.21
CACNA1C-208ENST00000399601 CRIP3Q6Q6R5 217 aa7.5□□□□□ -1.21
CACNA1C-208ENST00000399601 Q6ZRX8 168 aa7.5□□□□□ -1.21
CACNA1C-208ENST00000399601 DNAH10OSP0CZ25 163 aa7.49□□□□□ -1.21
CACNA1C-208ENST00000399601 BCE1O60756 84 aa7.49□□□□□ -1.21
CACNA1C-208ENST00000399601 Q6ZPA2 131 aa7.49□□□□□ -1.21
CACNA1C-208ENST00000399601 LINC00528Q8N1L1 170 aa7.49□□□□□ -1.21
CACNA1C-208ENST00000399601 IGF2RP11717 2491 aa7.48□□□□□ -1.21
CACNA1C-208ENST00000399601 CYP4F30PQ9H0H9 118 aa7.48□□□□□ -1.21
CACNA1C-208ENST00000399601 JMJD1CQ15652 2540 aa7.48□□□□□ -1.21
CACNA1C-208ENST00000399601 KRTAP10-11P60412 298 aa7.47□□□□□ -1.21
CACNA1C-208ENST00000399601 Q1T7F1 81 aa7.47□□□□□ -1.21
CACNA1C-208ENST00000399601 SPINK7P58062 85 aa7.46□□□□□ -1.21
CACNA1C-208ENST00000399601 FAM104AQ969W3 186 aa7.45□□□□□ -1.22
CACNA1C-208ENST00000399601 ZNF462Q96JM2 2506 aa7.45□□□□□ -1.22
CACNA1C-208ENST00000399601 C5orf42Q9H799 3197 aa7.44□□□□□ -1.22
CACNA1C-208ENST00000399601 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
CACNA1C-208ENST00000399601 CNFNQ9BYD5 112 aa7.44□□□□□ -1.22
CACNA1C-208ENST00000399601 BRCA2P51587 3418 aa7.43□□□□□ -1.22
CACNA1C-208ENST00000399601 Q8NAQ8 132 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms