RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 LOC105371267A0A1B0GV96 52 aa8.58□□□□□ -1.04
HLA-DQB1-202ENST00000399079 GAGE10A6NGK3 116 aa8.58□□□□□ -1.04
HLA-DQB1-202ENST00000399079 RPL37AP8A6NKH3 93 aa8.58□□□□□ -1.04
HLA-DQB1-202ENST00000399079 SFTA2Q6UW10 78 aa8.58□□□□□ -1.04
HLA-DQB1-202ENST00000399079 REG3GQ6UW15 175 aa8.58□□□□□ -1.04
HLA-DQB1-202ENST00000399079 LINC00167Q96N53 147 aa8.58□□□□□ -1.04
HLA-DQB1-202ENST00000399079 PLNP26678 52 aa8.57□□□□□ -1.04
HLA-DQB1-202ENST00000399079 MAP1LC3CQ9BXW4 147 aa8.57□□□□□ -1.04
HLA-DQB1-202ENST00000399079 DPM2O94777 84 aa8.56□□□□□ -1.04
HLA-DQB1-202ENST00000399079 LINC00158P58513 81 aa8.56□□□□□ -1.04
HLA-DQB1-202ENST00000399079 TSPEAR-AS2P59090 65 aa8.56□□□□□ -1.04
HLA-DQB1-202ENST00000399079 LCE2CQ5TA81 110 aa8.56□□□□□ -1.04
HLA-DQB1-202ENST00000399079 IGLV5-37A0A075B6J1 123 aa8.55□□□□□ -1.04
HLA-DQB1-202ENST00000399079 IGKCP01834 107 aa8.55□□□□□ -1.04
HLA-DQB1-202ENST00000399079 NKAPP1Q8N9T2 125 aa8.55□□□□□ -1.04
HLA-DQB1-202ENST00000399079 Q8NDZ9 215 aa8.55□□□□□ -1.04
HLA-DQB1-202ENST00000399079 NDUFA12Q9UI09 145 aa8.55□□□□□ -1.04
HLA-DQB1-202ENST00000399079 SMIM13P0DJ93 91 aa8.54□□□□□ -1.04
HLA-DQB1-202ENST00000399079 VPREB1P12018 145 aa8.54□□□□□ -1.04
HLA-DQB1-202ENST00000399079 DIRC1Q969H9 104 aa8.54□□□□□ -1.04
HLA-DQB1-202ENST00000399079 IGKV2-28A0A075B6P5 120 aa8.53□□□□□ -1.04
HLA-DQB1-202ENST00000399079 H0Y9J4 135 aa8.53□□□□□ -1.04
HLA-DQB1-202ENST00000399079 SYS1-DBNDD2H3BUS1 97 aa8.53□□□□□ -1.04
HLA-DQB1-202ENST00000399079 LEPROTO15243 131 aa8.53□□□□□ -1.04
HLA-DQB1-202ENST00000399079 IGKV2D-28P01615 120 aa8.53□□□□□ -1.04
HLA-DQB1-202ENST00000399079 MEIG1Q5JSS6 88 aa8.53□□□□□ -1.04
HLA-DQB1-202ENST00000399079 MYMXA0A1B0GTQ4 84 aa8.52□□□□□ -1.05
HLA-DQB1-202ENST00000399079 HERV-K104P63124 156 aa8.52□□□□□ -1.05
HLA-DQB1-202ENST00000399079 COA6Q5JTJ3 125 aaKnown RBP8.52□□□□□ -1.05
HLA-DQB1-202ENST00000399079 J3QQQ9 107 aa8.51□□□□□ -1.05
HLA-DQB1-202ENST00000399079 ZNF861PO60384 105 aa8.51□□□□□ -1.05
HLA-DQB1-202ENST00000399079 KRTAP10-8P60410 259 aa8.51□□□□□ -1.05
HLA-DQB1-202ENST00000399079 PLEKHB2Q96CS7 222 aa8.51□□□□□ -1.05
HLA-DQB1-202ENST00000399079 HERVK_113P61574 105 aa8.5□□□□□ -1.05
HLA-DQB1-202ENST00000399079 RPL24P83731 157 aaKnown RBP8.5□□□□□ -1.05
HLA-DQB1-202ENST00000399079 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
HLA-DQB1-202ENST00000399079 BCE1O60756 84 aa8.49□□□□□ -1.05
HLA-DQB1-202ENST00000399079 IGLV1-50A0A075B6I6 118 aa8.49□□□□□ -1.05
HLA-DQB1-202ENST00000399079 C3orf79P0CE67 100 aa8.49□□□□□ -1.05
HLA-DQB1-202ENST00000399079 LINC01545Q5VT33 79 aa8.49□□□□□ -1.05
HLA-DQB1-202ENST00000399079 DAND5Q8N907 189 aa8.49□□□□□ -1.05
HLA-DQB1-202ENST00000399079 KRTAP1-4P0C5Y4 121 aa8.48□□□□□ -1.05
HLA-DQB1-202ENST00000399079 LGALS3P17931 250 aaKnown RBP8.48□□□□□ -1.05
HLA-DQB1-202ENST00000399079 SMCPP49901 116 aaPredicted RBP8.48□□□□□ -1.05
HLA-DQB1-202ENST00000399079 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
HLA-DQB1-202ENST00000399079 TMEM238C9JI98 176 aa8.47□□□□□ -1.05
HLA-DQB1-202ENST00000399079 S100A6P06703 90 aa8.47□□□□□ -1.05
HLA-DQB1-202ENST00000399079 PET117Q6UWS5 81 aa8.47□□□□□ -1.05
HLA-DQB1-202ENST00000399079 BOD1L2Q8IYS8 172 aa8.47□□□□□ -1.05
HLA-DQB1-202ENST00000399079 LINC00587B1AMM8 73 aa8.46□□□□□ -1.05
HLA-DQB1-202ENST00000399079 E9PLD3 99 aa8.46□□□□□ -1.05
HLA-DQB1-202ENST00000399079 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.05
HLA-DQB1-202ENST00000399079 NMUP48645 174 aa8.46□□□□□ -1.05
HLA-DQB1-202ENST00000399079 KRTDAPP60985 99 aa8.46□□□□□ -1.05
HLA-DQB1-202ENST00000399079 TMEM126AQ9H061 195 aa8.45□□□□□ -1.06
HLA-DQB1-202ENST00000399079 HMCN2Q8NDA2 5059 aa8.45□□□□□ -1.06
HLA-DQB1-202ENST00000399079 M0R378 163 aa8.44□□□□□ -1.06
HLA-DQB1-202ENST00000399079 NCR3O14931 201 aa8.44□□□□□ -1.06
HLA-DQB1-202ENST00000399079 UBE2AP49459 152 aa8.44□□□□□ -1.06
HLA-DQB1-202ENST00000399079 KRTAP13-1Q8IUC0 172 aa8.44□□□□□ -1.06
HLA-DQB1-202ENST00000399079 PRLHP81277 87 aa8.43□□□□□ -1.06
HLA-DQB1-202ENST00000399079 IGKV2D-26A0A0A0MRZ7 120 aa8.42□□□□□ -1.06
HLA-DQB1-202ENST00000399079 A0A0J9YXY3 114 aa8.42□□□□□ -1.06
HLA-DQB1-202ENST00000399079 FAM19A1Q7Z5A9 133 aa8.42□□□□□ -1.06
HLA-DQB1-202ENST00000399079 ADAMTSL4-AS1Q5T5F5 129 aa8.41□□□□□ -1.06
HLA-DQB1-202ENST00000399079 TTTY13Q9BZ97 58 aa8.41□□□□□ -1.06
HLA-DQB1-202ENST00000399079 LOC107984156A0A0G2JMH3 177 aa8.4□□□□□ -1.06
HLA-DQB1-202ENST00000399079 EIF4EBP3O60516 100 aaPredicted RBP8.4□□□□□ -1.06
HLA-DQB1-202ENST00000399079 NPC2P61916 151 aa8.4□□□□□ -1.06
HLA-DQB1-202ENST00000399079 ARL17AQ8IVW1 177 aa8.4□□□□□ -1.06
HLA-DQB1-202ENST00000399079 ATOH7Q8N100 152 aa8.39□□□□□ -1.07
HLA-DQB1-202ENST00000399079 ANAPC11Q9NYG5 84 aa8.39□□□□□ -1.07
HLA-DQB1-202ENST00000399079 C5orf52A6NGY3 159 aa8.39□□□□□ -1.07
HLA-DQB1-202ENST00000399079 SOSTDC1Q6X4U4 206 aa8.39□□□□□ -1.07
HLA-DQB1-202ENST00000399079 A0A087X002 238 aa8.38□□□□□ -1.07
HLA-DQB1-202ENST00000399079 TRBV10-3A0A0K0K1G6 114 aa8.38□□□□□ -1.07
HLA-DQB1-202ENST00000399079 HIST3H2BBQ8N257 126 aa8.38□□□□□ -1.07
HLA-DQB1-202ENST00000399079 MIEN1Q9BRT3 115 aa8.38□□□□□ -1.07
HLA-DQB1-202ENST00000399079 C20orf202A1L168 122 aa8.37□□□□□ -1.07
HLA-DQB1-202ENST00000399079 ZNF815PA8K554 130 aa8.37□□□□□ -1.07
HLA-DQB1-202ENST00000399079 LORP23490 312 aaPredicted RBP8.37□□□□□ -1.07
HLA-DQB1-202ENST00000399079 AKR1D1P51857 326 aa8.37□□□□□ -1.07
HLA-DQB1-202ENST00000399079 LITAFQ99732 161 aa8.37□□□□□ -1.07
HLA-DQB1-202ENST00000399079 SNRPEP62304 92 aaKnown RBP8.36□□□□□ -1.07
HLA-DQB1-202ENST00000399079 ANKRD39Q53RE8 183 aa8.36□□□□□ -1.07
HLA-DQB1-202ENST00000399079 HIST1H2BLQ99880 126 aa8.36□□□□□ -1.07
HLA-DQB1-202ENST00000399079 KCNQ1DNQ9H478 68 aa8.36□□□□□ -1.07
HLA-DQB1-202ENST00000399079 PRYO14603 147 aa8.35□□□□□ -1.07
HLA-DQB1-202ENST00000399079 SMIM6P0DI80 62 aa8.35□□□□□ -1.07
HLA-DQB1-202ENST00000399079 RPL13AP40429 203 aaKnown RBP8.35□□□□□ -1.07
HLA-DQB1-202ENST00000399079 LINC00518Q8N0U6 118 aa8.35□□□□□ -1.07
HLA-DQB1-202ENST00000399079 HIGD2AQ9BW72 106 aa8.35□□□□□ -1.07
HLA-DQB1-202ENST00000399079 S100A2P29034 98 aa8.34□□□□□ -1.07
HLA-DQB1-202ENST00000399079 TRBV10-2A0A0K0K1G8 114 aa8.34□□□□□ -1.08
HLA-DQB1-202ENST00000399079 NDUFC2O95298 119 aa8.34□□□□□ -1.08
HLA-DQB1-202ENST00000399079 DDTP30046 118 aa8.34□□□□□ -1.08
HLA-DQB1-202ENST00000399079 SPRR1AP35321 89 aa8.34□□□□□ -1.08
HLA-DQB1-202ENST00000399079 SPANXB1Q9NS25 103 aaPredicted RBP8.34□□□□□ -1.08
HLA-DQB1-202ENST00000399079 KRTAP4-16G5E9R7 235 aaPredicted RBP8.33□□□□□ -1.08
HLA-DQB1-202ENST00000399079 CRYGAP11844 174 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms