RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 LINC00614P0C842 121 aa8.32□□□□□ -1.08
SNRNP25-203ENST00000397876 CBLN2Q8IUK8 224 aa8.32□□□□□ -1.08
SNRNP25-203ENST00000397876 C18orf32Q8TCD1 76 aa8.32□□□□□ -1.08
SNRNP25-203ENST00000397876 ZNF625Q96I27 306 aaPredicted RBP8.32□□□□□ -1.08
SNRNP25-203ENST00000397876 TMEM170BQ5T4T1 132 aa8.31□□□□□ -1.08
SNRNP25-203ENST00000397876 URB1-AS1Q96HZ7 61 aa8.31□□□□□ -1.08
SNRNP25-203ENST00000397876 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
SNRNP25-203ENST00000397876 TRAPPC1Q9Y5R8 145 aa8.31□□□□□ -1.08
SNRNP25-203ENST00000397876 C11orf86A6NJI1 115 aa8.3□□□□□ -1.08
SNRNP25-203ENST00000397876 M0R378 163 aa8.3□□□□□ -1.08
SNRNP25-203ENST00000397876 PMCHL1Q16048 86 aa8.3□□□□□ -1.08
SNRNP25-203ENST00000397876 BAGE3Q86Y29 109 aa8.3□□□□□ -1.08
SNRNP25-203ENST00000397876 CTAG1AP78358 180 aa8.28□□□□□ -1.08
SNRNP25-203ENST00000397876 Q8NDZ9 215 aa8.28□□□□□ -1.08
SNRNP25-203ENST00000397876 LINC00158P58513 81 aa8.27□□□□□ -1.09
SNRNP25-203ENST00000397876 PLEKHB2Q96CS7 222 aa8.27□□□□□ -1.09
SNRNP25-203ENST00000397876 HIGD2AQ9BW72 106 aa8.27□□□□□ -1.09
SNRNP25-203ENST00000397876 TPRXLQ17RH7 258 aa8.26□□□□□ -1.09
SNRNP25-203ENST00000397876 CDIP1Q9H305 208 aa8.26□□□□□ -1.09
SNRNP25-203ENST00000397876 CHTOPQ9Y3Y2 248 aaKnown RBP8.26□□□□□ -1.09
SNRNP25-203ENST00000397876 IGLV7-46A0A075B6I9 117 aa8.24□□□□□ -1.09
SNRNP25-203ENST00000397876 COLCA2A8K830 154 aa8.24□□□□□ -1.09
SNRNP25-203ENST00000397876 C3orf22Q8N5N4 141 aa8.24□□□□□ -1.09
SNRNP25-203ENST00000397876 A0A0U1RRA0 63 aa8.23□□□□□ -1.09
SNRNP25-203ENST00000397876 S100A6P06703 90 aa8.23□□□□□ -1.09
SNRNP25-203ENST00000397876 AKR1D1P51857 326 aa8.23□□□□□ -1.09
SNRNP25-203ENST00000397876 LINC00518Q8N0U6 118 aa8.23□□□□□ -1.09
SNRNP25-203ENST00000397876 ZNF706Q9Y5V0 76 aaPredicted RBP8.23□□□□□ -1.09
SNRNP25-203ENST00000397876 MUC17Q685J3 4493 aa8.22□□□□□ -1.09
SNRNP25-203ENST00000397876 TMEM223A0PJW6 202 aa8.22□□□□□ -1.09
SNRNP25-203ENST00000397876 SPAG11AQ6PDA7 123 aa8.22□□□□□ -1.09
SNRNP25-203ENST00000397876 SPRR4Q96PI1 79 aa8.22□□□□□ -1.09
SNRNP25-203ENST00000397876 TRAV12-1A0A0B4J245 112 aa8.21□□□□□ -1.1
SNRNP25-203ENST00000397876 PRYO14603 147 aa8.21□□□□□ -1.1
SNRNP25-203ENST00000397876 MEIG1Q5JSS6 88 aa8.21□□□□□ -1.1
SNRNP25-203ENST00000397876 SMIM13P0DJ93 91 aa8.2□□□□□ -1.1
SNRNP25-203ENST00000397876 BOD1L2Q8IYS8 172 aa8.2□□□□□ -1.1
SNRNP25-203ENST00000397876 IFI27L1Q96BM0 104 aa8.2□□□□□ -1.1
SNRNP25-203ENST00000397876 CHCHD1Q96BP2 118 aaKnown RBP8.2□□□□□ -1.1
SNRNP25-203ENST00000397876 FAT4Q6V0I7 4981 aa8.2□□□□□ -1.1
SNRNP25-203ENST00000397876 SMIM6P0DI80 62 aa8.19□□□□□ -1.1
SNRNP25-203ENST00000397876 HERV-K104P63124 156 aa8.19□□□□□ -1.1
SNRNP25-203ENST00000397876 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
SNRNP25-203ENST00000397876 PPDPFQ9H3Y8 114 aa8.19□□□□□ -1.1
SNRNP25-203ENST00000397876 NCR3O14931 201 aa8.18□□□□□ -1.1
SNRNP25-203ENST00000397876 S100A12P80511 92 aa8.18□□□□□ -1.1
SNRNP25-203ENST00000397876 MIR7-3HGQ8N6C7 128 aa8.18□□□□□ -1.1
SNRNP25-203ENST00000397876 LINC00337Q8N6G1 96 aa8.18□□□□□ -1.1
SNRNP25-203ENST00000397876 C12orf57Q99622 126 aa8.18□□□□□ -1.1
SNRNP25-203ENST00000397876 ETDCA0A1B0GVM5 59 aa8.17□□□□□ -1.1
SNRNP25-203ENST00000397876 LINC00587B1AMM8 73 aa8.17□□□□□ -1.1
SNRNP25-203ENST00000397876 SPRR1AP35321 89 aa8.16□□□□□ -1.1
SNRNP25-203ENST00000397876 LCE2AQ5TA79 106 aaPredicted RBP8.16□□□□□ -1.1
SNRNP25-203ENST00000397876 FP248Q71RG6 208 aaPredicted RBP8.16□□□□□ -1.1
SNRNP25-203ENST00000397876 MAP1LC3CQ9BXW4 147 aa8.16□□□□□ -1.1
SNRNP25-203ENST00000397876 KCNQ1DNQ9H478 68 aa8.16□□□□□ -1.1
SNRNP25-203ENST00000397876 C5orf52A6NGY3 159 aa8.15□□□□□ -1.1
SNRNP25-203ENST00000397876 SNRPEP62304 92 aaKnown RBP8.15□□□□□ -1.1
SNRNP25-203ENST00000397876 Q8NBF4 154 aa8.15□□□□□ -1.1
SNRNP25-203ENST00000397876 YPEL4Q96NS1 127 aa8.15□□□□□ -1.1
SNRNP25-203ENST00000397876 NDUFA12Q9UI09 145 aa8.15□□□□□ -1.1
SNRNP25-203ENST00000397876 MYMXA0A1B0GTQ4 84 aa8.14□□□□□ -1.11
SNRNP25-203ENST00000397876 HSBP1O75506 76 aa8.14□□□□□ -1.11
SNRNP25-203ENST00000397876 DAND5Q8N907 189 aa8.14□□□□□ -1.11
SNRNP25-203ENST00000397876 SMCR5Q8TEV8 140 aa8.14□□□□□ -1.11
SNRNP25-203ENST00000397876 TRBV10-3A0A0K0K1G6 114 aa8.13□□□□□ -1.11
SNRNP25-203ENST00000397876 KRTAP9-2Q9BYQ4 174 aa8.13□□□□□ -1.11
SNRNP25-203ENST00000397876 PCP4L1A6NKN8 68 aa8.12□□□□□ -1.11
SNRNP25-203ENST00000397876 KRTAP4-16G5E9R7 235 aaPredicted RBP8.12□□□□□ -1.11
SNRNP25-203ENST00000397876 H0Y8G0 127 aa8.12□□□□□ -1.11
SNRNP25-203ENST00000397876 SPINK1P00995 79 aa8.11□□□□□ -1.11
SNRNP25-203ENST00000397876 LINC00483Q53H64 154 aa8.11□□□□□ -1.11
SNRNP25-203ENST00000397876 FAM19A2Q8N3H0 131 aa8.11□□□□□ -1.11
SNRNP25-203ENST00000397876 S100A2P29034 98 aa8.1□□□□□ -1.11
SNRNP25-203ENST00000397876 DDTP30046 118 aa8.09□□□□□ -1.11
SNRNP25-203ENST00000397876 TSPEAR-AS2P59090 65 aa8.09□□□□□ -1.11
SNRNP25-203ENST00000397876 GAGE2AQ6NT46 116 aa8.09□□□□□ -1.11
SNRNP25-203ENST00000397876 TRBV10-2A0A0K0K1G8 114 aa8.08□□□□□ -1.12
SNRNP25-203ENST00000397876 B5MCH6 92 aa8.08□□□□□ -1.12
SNRNP25-203ENST00000397876 LEPROTO15243 131 aa8.08□□□□□ -1.12
SNRNP25-203ENST00000397876 LEPROTL1O95214 131 aa8.08□□□□□ -1.12
SNRNP25-203ENST00000397876 PLNP26678 52 aa8.08□□□□□ -1.12
SNRNP25-203ENST00000397876 KRTAP13-3Q3SY46 172 aa8.08□□□□□ -1.12
SNRNP25-203ENST00000397876 MIEN1Q9BRT3 115 aa8.08□□□□□ -1.12
SNRNP25-203ENST00000397876 IGLV9-49A0A0B4J1Y8 123 aa8.07□□□□□ -1.12
SNRNP25-203ENST00000397876 LOC107984156A0A0G2JMH3 177 aa8.07□□□□□ -1.12
SNRNP25-203ENST00000397876 HERVK_113P61574 105 aa8.07□□□□□ -1.12
SNRNP25-203ENST00000397876 MOBPQ13875 183 aa8.07□□□□□ -1.12
SNRNP25-203ENST00000397876 ARL17AQ8IVW1 177 aa8.07□□□□□ -1.12
SNRNP25-203ENST00000397876 SPANXB1Q9NS25 103 aaPredicted RBP8.07□□□□□ -1.12
SNRNP25-203ENST00000397876 J3QQQ9 107 aa8.05□□□□□ -1.12
SNRNP25-203ENST00000397876 ERC2-IT1O76042 136 aa8.05□□□□□ -1.12
SNRNP25-203ENST00000397876 NMUP48645 174 aa8.05□□□□□ -1.12
SNRNP25-203ENST00000397876 Q6ZRX8 168 aa8.05□□□□□ -1.12
SNRNP25-203ENST00000397876 SSBP3-AS1Q7Z2R9 100 aa8.05□□□□□ -1.12
SNRNP25-203ENST00000397876 HIST1H2BKO60814 126 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 SERF1AO75920 110 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 DPM2O94777 84 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 TRGC2P03986 189 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 HIST1H2BJP06899 126 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms