RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SCXQ7RTU7 201 aa14.94□□□□□ -0.02
TSPAN4-203ENST00000397397 CIRBP-AS1Q8TBR5 109 aa14.93□□□□□ -0.02
TSPAN4-203ENST00000397397 FAM19A5Q7Z5A7 132 aaPredicted RBP14.92□□□□□ -0.02
TSPAN4-203ENST00000397397 PLAC8Q9NZF1 115 aa14.92□□□□□ -0.02
TSPAN4-203ENST00000397397 APOBP04114 4563 aaKnown RBP14.92□□□□□ -0.02
TSPAN4-203ENST00000397397 HSPG2P98160 4391 aa14.92□□□□□ -0.02
TSPAN4-203ENST00000397397 XGP55808 180 aa14.92□□□□□ -0.02
TSPAN4-203ENST00000397397 NPC2P61916 151 aa14.92□□□□□ -0.02
TSPAN4-203ENST00000397397 SPANXDQ9BXN6 97 aa14.91□□□□□ -0.02
TSPAN4-203ENST00000397397 SPANXCQ9NY87 97 aa14.91□□□□□ -0.02
TSPAN4-203ENST00000397397 SERTAD4-AS1Q5TG53 156 aa14.9□□□□□ -0.02
TSPAN4-203ENST00000397397 MIEN1Q9BRT3 115 aa14.9□□□□□ -0.02
TSPAN4-203ENST00000397397 C12orf57Q99622 126 aa14.89□□□□□ -0.03
TSPAN4-203ENST00000397397 PLA2G2DQ9UNK4 145 aa14.89□□□□□ -0.03
TSPAN4-203ENST00000397397 KRTAP7-1Q8IUC3 87 aa14.88□□□□□ -0.03
TSPAN4-203ENST00000397397 CDK2AP2O75956 126 aa14.87□□□□□ -0.03
TSPAN4-203ENST00000397397 SOSTDC1Q6X4U4 206 aa14.87□□□□□ -0.03
TSPAN4-203ENST00000397397 LINC00308Q8TCZ7 52 aa14.87□□□□□ -0.03
TSPAN4-203ENST00000397397 LOC107984156A0A0G2JMH3 177 aa14.86□□□□□ -0.03
TSPAN4-203ENST00000397397 RPL24P83731 157 aaKnown RBP14.86□□□□□ -0.03
TSPAN4-203ENST00000397397 SRSF9Q13242 221 aaKnown RBP eCLIP14.86□□□□□ -0.03
TSPAN4-203ENST00000397397 Q6ZVH6 145 aa14.86□□□□□ -0.03
TSPAN4-203ENST00000397397 ARL17AQ8IVW1 177 aa14.86□□□□□ -0.03
TSPAN4-203ENST00000397397 SPANXB1Q9NS25 103 aaPredicted RBP14.86□□□□□ -0.03
TSPAN4-203ENST00000397397 EPM2AB3EWF7 344 aa14.85□□□□□ -0.03
TSPAN4-203ENST00000397397 EIF4EBP3O60516 100 aaPredicted RBP14.85□□□□□ -0.03
TSPAN4-203ENST00000397397 KRTAP17-1Q9BYP8 105 aa14.85□□□□□ -0.03
TSPAN4-203ENST00000397397 PRO1933Q9H354 126 aa14.85□□□□□ -0.03
TSPAN4-203ENST00000397397 UQCR10Q9UDW1 63 aa14.85□□□□□ -0.03
TSPAN4-203ENST00000397397 VPREB1P12018 145 aa14.84□□□□□ -0.03
TSPAN4-203ENST00000397397 C2orf91Q6ZV80 131 aa14.84□□□□□ -0.03
TSPAN4-203ENST00000397397 Q8NDZ9 215 aa14.84□□□□□ -0.03
TSPAN4-203ENST00000397397 HIGD1BQ9P298 99 aa14.84□□□□□ -0.03
TSPAN4-203ENST00000397397 M0QXV9 152 aa14.83□□□□□ -0.03
TSPAN4-203ENST00000397397 IFITM1P13164 125 aa14.83□□□□□ -0.03
TSPAN4-203ENST00000397397 NKAPP1Q8N9T2 125 aa14.83□□□□□ -0.03
TSPAN4-203ENST00000397397 C22orf24Q9Y442 160 aa14.83□□□□□ -0.03
TSPAN4-203ENST00000397397 PHF5AQ7RTV0 110 aaKnown RBP14.83□□□□□ -0.04
TSPAN4-203ENST00000397397 COPS9Q8WXC6 57 aa14.83□□□□□ -0.04
TSPAN4-203ENST00000397397 IGLV5-37A0A075B6J1 123 aa14.82□□□□□ -0.04
TSPAN4-203ENST00000397397 MUSTN1Q8IVN3 82 aa14.82□□□□□ -0.04
TSPAN4-203ENST00000397397 LINC00518Q8N0U6 118 aa14.82□□□□□ -0.04
TSPAN4-203ENST00000397397 HIST1H4GQ99525 98 aa14.81□□□□□ -0.04
TSPAN4-203ENST00000397397 PRR3P79522 188 aaKnown RBP14.79□□□□□ -0.04
TSPAN4-203ENST00000397397 NCR3O14931 201 aa14.78□□□□□ -0.04
TSPAN4-203ENST00000397397 MRPL55Q7Z7F7 128 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-203ENST00000397397 NDUFC2O95298 119 aa14.77□□□□□ -0.04
TSPAN4-203ENST00000397397 LBHQ53QV2 105 aaPredicted RBP14.77□□□□□ -0.04
TSPAN4-203ENST00000397397 GAGE10A6NGK3 116 aa14.76□□□□□ -0.05
TSPAN4-203ENST00000397397 SMR3BP02814 79 aaPredicted RBP14.76□□□□□ -0.05
TSPAN4-203ENST00000397397 KRTAP4-5Q9BYR2 181 aa14.76□□□□□ -0.05
TSPAN4-203ENST00000397397 PPDPFQ9H3Y8 114 aa14.76□□□□□ -0.05
TSPAN4-203ENST00000397397 M0R378 163 aa14.75□□□□□ -0.05
TSPAN4-203ENST00000397397 C7orf33Q8WU49 177 aa14.75□□□□□ -0.05
TSPAN4-203ENST00000397397 HNRNPA3P51991 378 aaKnown RBP14.75□□□□□ -0.05
TSPAN4-203ENST00000397397 LINC00167Q96N53 147 aa14.75□□□□□ -0.05
TSPAN4-203ENST00000397397 UBE2BP63146 152 aa14.74□□□□□ -0.05
TSPAN4-203ENST00000397397 TSTD3H0UI37 97 aa14.73□□□□□ -0.05
TSPAN4-203ENST00000397397 TAL2Q16559 108 aa14.72□□□□□ -0.05
TSPAN4-203ENST00000397397 TRBV10-2A0A0K0K1G8 114 aa14.71□□□□□ -0.05
TSPAN4-203ENST00000397397 RPL37AP8A6NKH3 93 aa14.71□□□□□ -0.05
TSPAN4-203ENST00000397397 LINC00528Q8N1L1 170 aa14.71□□□□□ -0.05
TSPAN4-203ENST00000397397 PCLOQ9Y6V0 5065 aa14.69□□□□□ -0.06
TSPAN4-203ENST00000397397 ABCA13Q86UQ4 5058 aa14.69□□□□□ -0.06
TSPAN4-203ENST00000397397 IGKV2-28A0A075B6P5 120 aa14.68□□□□□ -0.06
TSPAN4-203ENST00000397397 A4D1N5 150 aa14.68□□□□□ -0.06
TSPAN4-203ENST00000397397 IGKV2D-28P01615 120 aa14.68□□□□□ -0.06
TSPAN4-203ENST00000397397 HSD52Q0P140 79 aa14.68□□□□□ -0.06
TSPAN4-203ENST00000397397 KRTAP11-1Q8IUC1 163 aa14.68□□□□□ -0.06
TSPAN4-203ENST00000397397 CEND1Q8N111 149 aa14.67□□□□□ -0.06
TSPAN4-203ENST00000397397 S100A7L2Q5SY68 101 aa14.66□□□□□ -0.06
TSPAN4-203ENST00000397397 IGLV1-50A0A075B6I6 118 aa14.66□□□□□ -0.06
TSPAN4-203ENST00000397397 TRBV10-3A0A0K0K1G6 114 aa14.65□□□□□ -0.06
TSPAN4-203ENST00000397397 DDTP30046 118 aa14.65□□□□□ -0.06
TSPAN4-203ENST00000397397 Q8N1X5 172 aa14.65□□□□□ -0.06
TSPAN4-203ENST00000397397 OR13C6PQ8NH95 151 aa14.65□□□□□ -0.06
TSPAN4-203ENST00000397397 LINC00337Q8N6G1 96 aa14.63□□□□□ -0.07
TSPAN4-203ENST00000397397 PSORS1C2Q9UIG4 136 aa14.63□□□□□ -0.07
TSPAN4-203ENST00000397397 FAM229AH3BQW9 127 aa14.62□□□□□ -0.07
TSPAN4-203ENST00000397397 RPL37AP61513 92 aaKnown RBP14.62□□□□□ -0.07
TSPAN4-203ENST00000397397 IGLV6-57P01721 117 aa14.61□□□□□ -0.07
TSPAN4-203ENST00000397397 FXYD2P54710 66 aa14.6□□□□□ -0.07
TSPAN4-203ENST00000397397 CTAG1AP78358 180 aa14.6□□□□□ -0.07
TSPAN4-203ENST00000397397 TRAV13-2A0A0B4J235 113 aa14.59□□□□□ -0.07
TSPAN4-203ENST00000397397 TMEM238LA0A1B0GVL6 79 aa14.59□□□□□ -0.07
TSPAN4-203ENST00000397397 A6NDN8 102 aa14.59□□□□□ -0.07
TSPAN4-203ENST00000397397 A6NJY4 79 aa14.59□□□□□ -0.07
TSPAN4-203ENST00000397397 TMEM126AQ9H061 195 aa14.59□□□□□ -0.07
TSPAN4-203ENST00000397397 C1orf137Q5JT78 98 aa14.58□□□□□ -0.07
TSPAN4-203ENST00000397397 FAT1Q14517 4588 aa14.58□□□□□ -0.08
TSPAN4-203ENST00000397397 PRYO14603 147 aa14.58□□□□□ -0.08
TSPAN4-203ENST00000397397 Q5VSD8 79 aa14.58□□□□□ -0.08
TSPAN4-203ENST00000397397 REG3GQ6UW15 175 aa14.57□□□□□ -0.08
TSPAN4-203ENST00000397397 KCNQ1DNQ9H478 68 aa14.57□□□□□ -0.08
TSPAN4-203ENST00000397397 PLA2G1BP04054 148 aaKnown RBP14.56□□□□□ -0.08
TSPAN4-203ENST00000397397 CFC1BP0CG36 223 aa14.56□□□□□ -0.08
TSPAN4-203ENST00000397397 CFC1P0CG37 223 aa14.56□□□□□ -0.08
TSPAN4-203ENST00000397397 TRAV23DV6A0A075B6W5 121 aa14.54□□□□□ -0.08
TSPAN4-203ENST00000397397 RAB37Q96AX2 223 aa14.54□□□□□ -0.08
TSPAN4-203ENST00000397397 CBY1Q9Y3M2 126 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms