RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 KRTAP24-1Q3LI83 254 aa3.69□□□□□ -1.82
VPS41-203ENST00000395969 XCL2Q9UBD3 114 aa3.69□□□□□ -1.82
VPS41-203ENST00000395969 A0A087WZ39 114 aa3.69□□□□□ -1.82
VPS41-203ENST00000395969 SMIM11BQ8TCY0 68 aa3.69□□□□□ -1.82
VPS41-203ENST00000395969 TEX15Q9BXT5 2789 aa3.68□□□□□ -1.82
VPS41-203ENST00000395969 TLN2Q9Y4G6 2542 aa3.68□□□□□ -1.82
VPS41-203ENST00000395969 TRBV6-8A0A0A6YYG3 113 aa3.68□□□□□ -1.82
VPS41-203ENST00000395969 IGKV3OR2-268A0A0C4DH90 116 aa3.68□□□□□ -1.82
VPS41-203ENST00000395969 CRPP02741 224 aa3.68□□□□□ -1.82
VPS41-203ENST00000395969 Q6ZTI0 123 aa3.68□□□□□ -1.82
VPS41-203ENST00000395969 PRR34Q9NV39 138 aa3.68□□□□□ -1.82
VPS41-203ENST00000395969 PRO0255Q9UI72 69 aa3.68□□□□□ -1.82
VPS41-203ENST00000395969 F8WEM9 126 aa3.68□□□□□ -1.82
VPS41-203ENST00000395969 FP248Q71RG6 208 aaPredicted RBP3.68□□□□□ -1.82
VPS41-203ENST00000395969 LINC00167Q96N53 147 aa3.68□□□□□ -1.82
VPS41-203ENST00000395969 NAV2Q8IVL1 2488 aa3.68□□□□□ -1.82
VPS41-203ENST00000395969 IGHV4-28A0A0C4DH34 117 aa3.67□□□□□ -1.82
VPS41-203ENST00000395969 KLKP1Q107X0 134 aa3.67□□□□□ -1.82
VPS41-203ENST00000395969 F8P00451 2351 aa3.67□□□□□ -1.82
VPS41-203ENST00000395969 PRM2P04554 102 aa3.67□□□□□ -1.82
VPS41-203ENST00000395969 TM2D3Q9BRN9 247 aa3.67□□□□□ -1.82
VPS41-203ENST00000395969 ZFYVE26Q68DK2 2539 aa3.67□□□□□ -1.82
VPS41-203ENST00000395969 TOMM7Q9P0U1 55 aa3.67□□□□□ -1.82
VPS41-203ENST00000395969 DNAH1Q9P2D7 4330 aa3.67□□□□□ -1.82
VPS41-203ENST00000395969 TRAV7A0A075B6U4 112 aa3.66□□□□□ -1.82
VPS41-203ENST00000395969 SMIM26A0A096LP01 95 aa3.66□□□□□ -1.82
VPS41-203ENST00000395969 LECT2O14960 151 aa3.66□□□□□ -1.82
VPS41-203ENST00000395969 DAD1P61803 113 aa3.66□□□□□ -1.82
VPS41-203ENST00000395969 HAMPP81172 84 aa3.66□□□□□ -1.82
VPS41-203ENST00000395969 SCXQ7RTU7 201 aa3.66□□□□□ -1.82
VPS41-203ENST00000395969 MIR7-3HGQ8N6C7 128 aa3.66□□□□□ -1.82
VPS41-203ENST00000395969 SND1-IT1Q9HBX3 110 aa3.66□□□□□ -1.82
VPS41-203ENST00000395969 GVQW2A0A096LPI5 108 aaPredicted RBP3.66□□□□□ -1.82
VPS41-203ENST00000395969 KRTAP10-11P60412 298 aa3.66□□□□□ -1.82
VPS41-203ENST00000395969 ORMDL1Q9P0S3 153 aa3.66□□□□□ -1.82
VPS41-203ENST00000395969 CHD6Q8TD26 2715 aa3.66□□□□□ -1.82
VPS41-203ENST00000395969 TRGV1A0A0A0MS02 117 aa3.65□□□□□ -1.82
VPS41-203ENST00000395969 IGHV3OR16-9A0A0B4J2B5 98 aa3.65□□□□□ -1.82
VPS41-203ENST00000395969 JMJD7-PLA2G4BH0Y9G9 81 aa3.65□□□□□ -1.82
VPS41-203ENST00000395969 Q75L30 129 aa3.65□□□□□ -1.82
VPS41-203ENST00000395969 SPATA3Q8NHX4 192 aa3.65□□□□□ -1.82
VPS41-203ENST00000395969 NOP10Q9NPE3 64 aaKnown RBP3.65□□□□□ -1.82
VPS41-203ENST00000395969 IGHV4-30-4P0DP06 118 aa3.65□□□□□ -1.83
VPS41-203ENST00000395969 LELP1Q5T871 98 aa3.65□□□□□ -1.83
VPS41-203ENST00000395969 TRBV7-6A0A0J9YX20 115 aa3.65□□□□□ -1.83
VPS41-203ENST00000395969 SPART-AS1P0CW21 52 aa3.65□□□□□ -1.83
VPS41-203ENST00000395969 COX17Q14061 63 aa3.65□□□□□ -1.83
VPS41-203ENST00000395969 FAM229BQ4G0N7 80 aa3.65□□□□□ -1.83
VPS41-203ENST00000395969 NBEAL2Q6ZNJ1 2754 aa3.64□□□□□ -1.83
VPS41-203ENST00000395969 ZANQ9Y493 2812 aa3.64□□□□□ -1.83
VPS41-203ENST00000395969 CCL18P55774 89 aa3.64□□□□□ -1.83
VPS41-203ENST00000395969 DNAH6Q9C0G6 4158 aa3.64□□□□□ -1.83
VPS41-203ENST00000395969 Q8IZM0 81 aa3.63□□□□□ -1.83
VPS41-203ENST00000395969 COX7B2Q8TF08 81 aa3.63□□□□□ -1.83
VPS41-203ENST00000395969 WFDC10AQ9H1F0 79 aa3.63□□□□□ -1.83
VPS41-203ENST00000395969 TRAV10A0A0B4J240 114 aa3.63□□□□□ -1.83
VPS41-203ENST00000395969 KRTAP26-1Q6PEX3 210 aa3.63□□□□□ -1.83
VPS41-203ENST00000395969 UBL5Q9BZL1 73 aa3.63□□□□□ -1.83
VPS41-203ENST00000395969 LRRK2Q5S007 2527 aa3.63□□□□□ -1.83
VPS41-203ENST00000395969 NSD1Q96L73 2696 aaPredicted RBP3.63□□□□□ -1.83
VPS41-203ENST00000395969 IBA57-AS1B1ANH7 110 aa3.63□□□□□ -1.83
VPS41-203ENST00000395969 TMEM256-PLSCR3K7ERE1 68 aa3.63□□□□□ -1.83
VPS41-203ENST00000395969 PSPHP1O15172 72 aa3.63□□□□□ -1.83
VPS41-203ENST00000395969 ATP5EP56381 51 aaPredicted RBP3.63□□□□□ -1.83
VPS41-203ENST00000395969 CENPEQ02224 2701 aa3.62□□□□□ -1.83
VPS41-203ENST00000395969 FLNAP21333 2647 aaKnown RBP3.62□□□□□ -1.83
VPS41-203ENST00000395969 NDUFC1O43677 76 aa3.62□□□□□ -1.83
VPS41-203ENST00000395969 PMAIP1Q13794 54 aa3.62□□□□□ -1.83
VPS41-203ENST00000395969 PRR4Q16378 134 aa3.62□□□□□ -1.83
VPS41-203ENST00000395969 Q8N814 137 aa3.62□□□□□ -1.83
VPS41-203ENST00000395969 LINC00158P58513 81 aa3.62□□□□□ -1.83
VPS41-203ENST00000395969 NANOS2P60321 138 aaKnown RBP3.62□□□□□ -1.83
VPS41-203ENST00000395969 CD164Q04900 197 aa3.62□□□□□ -1.83
VPS41-203ENST00000395969 A0A0J9YWU9 116 aa3.61□□□□□ -1.83
VPS41-203ENST00000395969 PAX4O43316 350 aa3.61□□□□□ -1.83
VPS41-203ENST00000395969 GCN1Q92616 2671 aaKnown RBP3.61□□□□□ -1.83
VPS41-203ENST00000395969 LOC110117498A0A087WWA1 95 aa3.61□□□□□ -1.83
VPS41-203ENST00000395969 A0A096LPF7 62 aa3.61□□□□□ -1.83
VPS41-203ENST00000395969 TRGV4A0A0C4DH28 118 aa3.61□□□□□ -1.83
VPS41-203ENST00000395969 TRBV7-4A0A0J9YYF1 115 aa3.61□□□□□ -1.83
VPS41-203ENST00000395969 LINC00959A0A1B0GUT2 108 aa3.61□□□□□ -1.83
VPS41-203ENST00000395969 Q6ZQT0 140 aa3.61□□□□□ -1.83
VPS41-203ENST00000395969 TRGV2A0A075B6R0 118 aa3.61□□□□□ -1.83
VPS41-203ENST00000395969 DNAH10OSP0CZ25 163 aa3.61□□□□□ -1.83
VPS41-203ENST00000395969 LINC01547P58512 204 aaPredicted RBP3.61□□□□□ -1.83
VPS41-203ENST00000395969 KIAA0087Q14695 138 aa3.61□□□□□ -1.83
VPS41-203ENST00000395969 EPG5Q9HCE0 2579 aa3.6□□□□□ -1.83
VPS41-203ENST00000395969 LINC01556Q5JQF7 62 aa3.6□□□□□ -1.83
VPS41-203ENST00000395969 PRR3P79522 188 aaKnown RBP3.6□□□□□ -1.83
VPS41-203ENST00000395969 CXCL6P80162 114 aa3.6□□□□□ -1.83
VPS41-203ENST00000395969 A8MU10 97 aa3.59□□□□□ -1.83
VPS41-203ENST00000395969 Q8N9L7 120 aa3.59□□□□□ -1.83
VPS41-203ENST00000395969 HELZ2Q9BYK8 2649 aaKnown RBP3.59□□□□□ -1.83
VPS41-203ENST00000395969 CELA1Q9UNI1 258 aa3.59□□□□□ -1.83
VPS41-203ENST00000395969 ITPR2Q14571 2701 aa3.59□□□□□ -1.83
VPS41-203ENST00000395969 ERC2-IT1O76042 136 aa3.59□□□□□ -1.84
VPS41-203ENST00000395969 TLX1NBP0CAT3 122 aa3.59□□□□□ -1.84
VPS41-203ENST00000395969 Q6ZVQ6 151 aa3.59□□□□□ -1.84
VPS41-203ENST00000395969 C6orf223Q8N319 242 aa3.59□□□□□ -1.84
VPS41-203ENST00000395969 SPTSSBQ8NFR3 76 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms