RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 CAMK2N2Q96S95 79 aa12.73□□□□□ -0.37
LMNB1-202ENST00000395354 HIGD2BQ4VC39 106 aa12.73□□□□□ -0.37
LMNB1-202ENST00000395354 C6orf48Q9UBA6 75 aa12.73□□□□□ -0.37
LMNB1-202ENST00000395354 KMT2AQ03164 3969 aa12.72□□□□□ -0.37
LMNB1-202ENST00000395354 LINC00337Q8N6G1 96 aa12.71□□□□□ -0.37
LMNB1-202ENST00000395354 ATXN8Q156A1 80 aa12.69□□□□□ -0.38
LMNB1-202ENST00000395354 PRO0461Q9UI25 63 aa12.69□□□□□ -0.38
LMNB1-202ENST00000395354 RPL28P46779 137 aaKnown RBP12.68□□□□□ -0.38
LMNB1-202ENST00000395354 KMT2CQ8NEZ4 4911 aaKnown RBP12.67□□□□□ -0.38
LMNB1-202ENST00000395354 C1orf134Q5TEV5 83 aa12.67□□□□□ -0.38
LMNB1-202ENST00000395354 Q6ZRU5 148 aa12.67□□□□□ -0.38
LMNB1-202ENST00000395354 SACSQ9NZJ4 4579 aa12.66□□□□□ -0.38
LMNB1-202ENST00000395354 SYCNQ0VAF6 134 aa12.65□□□□□ -0.38
LMNB1-202ENST00000395354 RNF151Q2KHN1 245 aa12.65□□□□□ -0.38
LMNB1-202ENST00000395354 USP17L23D6RBM5 183 aa12.64□□□□□ -0.39
LMNB1-202ENST00000395354 DNAH6Q9C0G6 4158 aa12.63□□□□□ -0.39
LMNB1-202ENST00000395354 NDUFC2-KCTD14E9PQ53 114 aa12.63□□□□□ -0.39
LMNB1-202ENST00000395354 LST1O00453 97 aa12.62□□□□□ -0.39
LMNB1-202ENST00000395354 WFDC2Q14508 124 aa12.62□□□□□ -0.39
LMNB1-202ENST00000395354 LINC01620Q4KN68 170 aa12.61□□□□□ -0.39
LMNB1-202ENST00000395354 Q6ZRN7 208 aaPredicted RBP12.61□□□□□ -0.39
LMNB1-202ENST00000395354 OR13C6PQ8NH95 151 aa12.61□□□□□ -0.39
LMNB1-202ENST00000395354 SMIM11BQ8TCY0 68 aa12.61□□□□□ -0.39
LMNB1-202ENST00000395354 TMEM126AQ9H061 195 aa12.61□□□□□ -0.39
LMNB1-202ENST00000395354 HYDINQ4G0P3 5121 aa12.61□□□□□ -0.39
LMNB1-202ENST00000395354 TRBV10-2A0A0K0K1G8 114 aa12.6□□□□□ -0.39
LMNB1-202ENST00000395354 M0QXV9 152 aa12.6□□□□□ -0.39
LMNB1-202ENST00000395354 PSCAO43653 123 aa12.6□□□□□ -0.39
LMNB1-202ENST00000395354 CARD19Q96LW7 228 aa12.6□□□□□ -0.39
LMNB1-202ENST00000395354 TLX1NBP0CAT3 122 aa12.59□□□□□ -0.39
LMNB1-202ENST00000395354 CLEC2BQ92478 149 aa12.59□□□□□ -0.39
LMNB1-202ENST00000395354 LINC01600Q96MT4 127 aa12.59□□□□□ -0.39
LMNB1-202ENST00000395354 H0YGX0 51 aa12.58□□□□□ -0.4
LMNB1-202ENST00000395354 SMCPP49901 116 aaPredicted RBP12.58□□□□□ -0.4
LMNB1-202ENST00000395354 C9JAW5 83 aa12.57□□□□□ -0.4
LMNB1-202ENST00000395354 RTL8CO15255 209 aa12.57□□□□□ -0.4
LMNB1-202ENST00000395354 PRR3P79522 188 aaKnown RBP12.57□□□□□ -0.4
LMNB1-202ENST00000395354 MTURNQ8N3F0 131 aa12.57□□□□□ -0.4
LMNB1-202ENST00000395354 Q8NDZ9 215 aa12.57□□□□□ -0.4
LMNB1-202ENST00000395354 SLC25A20O43772 301 aa12.56□□□□□ -0.4
LMNB1-202ENST00000395354 OCIAD2Q56VL3 154 aa12.56□□□□□ -0.4
LMNB1-202ENST00000395354 RYR2Q92736 4967 aa12.55□□□□□ -0.4
LMNB1-202ENST00000395354 NCR3O14931 201 aa12.55□□□□□ -0.4
LMNB1-202ENST00000395354 TRACP01848 142 aa12.55□□□□□ -0.4
LMNB1-202ENST00000395354 XAGE1AQ9HD64 81 aa12.55□□□□□ -0.4
LMNB1-202ENST00000395354 SLPIP03973 132 aa12.54□□□□□ -0.4
LMNB1-202ENST00000395354 S100A7L2Q5SY68 101 aa12.54□□□□□ -0.4
LMNB1-202ENST00000395354 Q6ZRP5 223 aa12.54□□□□□ -0.4
LMNB1-202ENST00000395354 ETDBQ3ZM63 59 aa12.53□□□□□ -0.4
LMNB1-202ENST00000395354 H3BT86 120 aa12.52□□□□□ -0.4
LMNB1-202ENST00000395354 K7ERU9 68 aa12.52□□□□□ -0.4
LMNB1-202ENST00000395354 IGLV6-57P01721 117 aa12.52□□□□□ -0.4
LMNB1-202ENST00000395354 DNAH2Q9P225 4427 aa12.52□□□□□ -0.41
LMNB1-202ENST00000395354 VPREB1P12018 145 aa12.52□□□□□ -0.41
LMNB1-202ENST00000395354 C14orf177Q52M58 125 aa12.52□□□□□ -0.41
LMNB1-202ENST00000395354 ANKRD29Q8N6D5 301 aa12.52□□□□□ -0.41
LMNB1-202ENST00000395354 GAGE2EQ4V326 116 aa12.51□□□□□ -0.41
LMNB1-202ENST00000395354 GAGE2DQ9UEU5 116 aa12.51□□□□□ -0.41
LMNB1-202ENST00000395354 RPL18AQ02543 176 aaKnown RBP12.5□□□□□ -0.41
LMNB1-202ENST00000395354 TNP2Q05952 138 aa12.5□□□□□ -0.41
LMNB1-202ENST00000395354 TEN1Q86WV5 123 aa12.5□□□□□ -0.41
LMNB1-202ENST00000395354 LRCOL1A6NCL2 159 aa12.49□□□□□ -0.41
LMNB1-202ENST00000395354 LECT2O14960 151 aa12.49□□□□□ -0.41
LMNB1-202ENST00000395354 FAM218AQ96MZ4 157 aa12.49□□□□□ -0.41
LMNB1-202ENST00000395354 M0R378 163 aa12.48□□□□□ -0.41
LMNB1-202ENST00000395354 LINC00336Q6ZUF6 198 aa12.48□□□□□ -0.41
LMNB1-202ENST00000395354 PLA2G2DQ9UNK4 145 aa12.48□□□□□ -0.41
LMNB1-202ENST00000395354 A0A087WTM6 91 aa12.47□□□□□ -0.41
LMNB1-202ENST00000395354 CNBPP62633 177 aaKnown RBP12.47□□□□□ -0.41
LMNB1-202ENST00000395354 CBY1Q9Y3M2 126 aa12.47□□□□□ -0.41
LMNB1-202ENST00000395354 A0A1B0GX51 115 aa12.47□□□□□ -0.41
LMNB1-202ENST00000395354 C9orf129Q5T035 196 aaKnown RBP12.47□□□□□ -0.41
LMNB1-202ENST00000395354 DNAH10Q8IVF4 4471 aa12.47□□□□□ -0.41
LMNB1-202ENST00000395354 LOC107984640A0A0U1RRK4 108 aa12.46□□□□□ -0.42
LMNB1-202ENST00000395354 J3QR89 54 aa12.45□□□□□ -0.42
LMNB1-202ENST00000395354 RYR3Q15413 4870 aa12.45□□□□□ -0.42
LMNB1-202ENST00000395354 PPDPFLQ8WWR9 84 aa12.44□□□□□ -0.42
LMNB1-202ENST00000395354 TRBV10-3A0A0K0K1G6 114 aa12.43□□□□□ -0.42
LMNB1-202ENST00000395354 A0A087WYN8 130 aa12.43□□□□□ -0.42
LMNB1-202ENST00000395354 C6orf99Q4VX62 202 aa12.43□□□□□ -0.42
LMNB1-202ENST00000395354 IGLV5-37A0A075B6J1 123 aa12.42□□□□□ -0.42
LMNB1-202ENST00000395354 TRAV23DV6A0A075B6W5 121 aa12.42□□□□□ -0.42
LMNB1-202ENST00000395354 DNAL4O96015 105 aa12.42□□□□□ -0.42
LMNB1-202ENST00000395354 Q8N814 137 aa12.41□□□□□ -0.42
LMNB1-202ENST00000395354 DNAH17Q9UFH2 4485 aa12.41□□□□□ -0.42
LMNB1-202ENST00000395354 FRAS1Q86XX4 4008 aa12.4□□□□□ -0.42
LMNB1-202ENST00000395354 SNCGO76070 127 aa12.4□□□□□ -0.42
LMNB1-202ENST00000395354 TRBV7-6A0A0J9YX20 115 aa12.39□□□□□ -0.43
LMNB1-202ENST00000395354 NKAPP1Q8N9T2 125 aa12.39□□□□□ -0.43
LMNB1-202ENST00000395354 BAALC-AS2P0C853 105 aa12.39□□□□□ -0.43
LMNB1-202ENST00000395354 DIRC1Q969H9 104 aa12.39□□□□□ -0.43
LMNB1-202ENST00000395354 LINC00167Q96N53 147 aa12.39□□□□□ -0.43
LMNB1-202ENST00000395354 PKIGQ9Y2B9 76 aa12.39□□□□□ -0.43
LMNB1-202ENST00000395354 GAGE2BQ13066 116 aa12.38□□□□□ -0.43
LMNB1-202ENST00000395354 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.37□□□□□ -0.43
LMNB1-202ENST00000395354 ZNF73O43830 326 aaPredicted RBP12.37□□□□□ -0.43
LMNB1-202ENST00000395354 SERTAD4-AS1Q5TG53 156 aa12.37□□□□□ -0.43
LMNB1-202ENST00000395354 LINC00575Q6W349 94 aa12.36□□□□□ -0.43
LMNB1-202ENST00000395354 FAT2Q9NYQ8 4349 aa12.35□□□□□ -0.43
LMNB1-202ENST00000395354 C16orf90A8MZG2 172 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms