RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 COX6B2Q6YFQ2 88 aa5.25□□□□□ -1.57
SYNE2-205ENST00000394768 XGP55808 180 aa5.25□□□□□ -1.57
SYNE2-205ENST00000394768 C16orf90A8MZG2 172 aa5.25□□□□□ -1.57
SYNE2-205ENST00000394768 ZNF295-AS1Q8N0V1 137 aa5.24□□□□□ -1.57
SYNE2-205ENST00000394768 POLQO75417 2590 aa5.24□□□□□ -1.57
SYNE2-205ENST00000394768 C11orf21Q9P2W6 132 aa5.24□□□□□ -1.57
SYNE2-205ENST00000394768 Q6ZRU5 148 aa5.23□□□□□ -1.57
SYNE2-205ENST00000394768 C11orf72Q8NBR9 251 aa5.23□□□□□ -1.57
SYNE2-205ENST00000394768 SPINT4Q6UDR6 99 aa5.22□□□□□ -1.57
SYNE2-205ENST00000394768 COL4A3Q01955 1670 aa5.22□□□□□ -1.57
SYNE2-205ENST00000394768 PRO0628Q9UI54 55 aa5.22□□□□□ -1.57
SYNE2-205ENST00000394768 CRIPTQ9P021 101 aa5.22□□□□□ -1.57
SYNE2-205ENST00000394768 KIAA0087Q14695 138 aa5.22□□□□□ -1.57
SYNE2-205ENST00000394768 WWC2-AS2Q96NR7 200 aa5.22□□□□□ -1.57
SYNE2-205ENST00000394768 PRR3P79522 188 aaKnown RBP5.21□□□□□ -1.58
SYNE2-205ENST00000394768 RTL8CO15255 209 aa5.21□□□□□ -1.58
SYNE2-205ENST00000394768 Q6ZRX8 168 aa5.2□□□□□ -1.58
SYNE2-205ENST00000394768 SMR3AQ99954 134 aa5.2□□□□□ -1.58
SYNE2-205ENST00000394768 ELOF1P60002 83 aaKnown RBP5.2□□□□□ -1.58
SYNE2-205ENST00000394768 NBDYA0A0U1RRE5 68 aa5.2□□□□□ -1.58
SYNE2-205ENST00000394768 CEP295Q9C0D2 2601 aa5.2□□□□□ -1.58
SYNE2-205ENST00000394768 DEFB116Q30KQ4 102 aa5.19□□□□□ -1.58
SYNE2-205ENST00000394768 Q6ZPA2 131 aa5.19□□□□□ -1.58
SYNE2-205ENST00000394768 LOC110117498A0A087WWA1 95 aa5.19□□□□□ -1.58
SYNE2-205ENST00000394768 ADAMTSL4-AS1Q5T5F5 129 aa5.19□□□□□ -1.58
SYNE2-205ENST00000394768 SMIM29Q86T20 159 aa5.19□□□□□ -1.58
SYNE2-205ENST00000394768 USP24Q9UPU5 2620 aa5.19□□□□□ -1.58
SYNE2-205ENST00000394768 RPL37AP61513 92 aaKnown RBP5.18□□□□□ -1.58
SYNE2-205ENST00000394768 PRO3102Q9H379 93 aa5.18□□□□□ -1.58
SYNE2-205ENST00000394768 A0A087WVE0 104 aa5.18□□□□□ -1.58
SYNE2-205ENST00000394768 LINC00167Q96N53 147 aa5.18□□□□□ -1.58
SYNE2-205ENST00000394768 AVPP01185 164 aa5.18□□□□□ -1.58
SYNE2-205ENST00000394768 IGLV5-39A0A0G2JS06 123 aa5.18□□□□□ -1.58
SYNE2-205ENST00000394768 RBM12B-AS1Q9P1G2 102 aa5.17□□□□□ -1.58
SYNE2-205ENST00000394768 TRBV7-4A0A0J9YYF1 115 aa5.17□□□□□ -1.58
SYNE2-205ENST00000394768 PRM2P04554 102 aa5.17□□□□□ -1.58
SYNE2-205ENST00000394768 Q96NJ1 140 aa5.17□□□□□ -1.58
SYNE2-205ENST00000394768 WISP2O76076 250 aa5.17□□□□□ -1.58
SYNE2-205ENST00000394768 GVQW2A0A096LPI5 108 aaPredicted RBP5.17□□□□□ -1.58
SYNE2-205ENST00000394768 PCSK5Q92824 1860 aa5.17□□□□□ -1.58
SYNE2-205ENST00000394768 UQCR11O14957 56 aa5.16□□□□□ -1.58
SYNE2-205ENST00000394768 LINC00846Q9NV44 126 aa5.16□□□□□ -1.58
SYNE2-205ENST00000394768 EPM2AB3EWF7 344 aa5.16□□□□□ -1.58
SYNE2-205ENST00000394768 CYP4F30PQ9H0H9 118 aa5.15□□□□□ -1.58
SYNE2-205ENST00000394768 SPATA3Q8NHX4 192 aa5.15□□□□□ -1.58
SYNE2-205ENST00000394768 CRIP3Q6Q6R5 217 aa5.15□□□□□ -1.58
SYNE2-205ENST00000394768 IGHV3OR16-9A0A0B4J2B5 98 aa5.15□□□□□ -1.58
SYNE2-205ENST00000394768 A8MWP4 228 aa5.15□□□□□ -1.58
SYNE2-205ENST00000394768 LINC00476Q8WZB0 136 aa5.15□□□□□ -1.59
SYNE2-205ENST00000394768 RPS28P62857 69 aaKnown RBP5.15□□□□□ -1.59
SYNE2-205ENST00000394768 TSPEAR-AS2P59090 65 aa5.14□□□□□ -1.59
SYNE2-205ENST00000394768 LINC01546A6NGU7 62 aa5.14□□□□□ -1.59
SYNE2-205ENST00000394768 LINC00315P59091 139 aa5.14□□□□□ -1.59
SYNE2-205ENST00000394768 CDIP1Q9H305 208 aa5.14□□□□□ -1.59
SYNE2-205ENST00000394768 ERC2-IT1O76042 136 aa5.14□□□□□ -1.59
SYNE2-205ENST00000394768 SSBP3-AS1Q7Z2R9 100 aa5.14□□□□□ -1.59
SYNE2-205ENST00000394768 IGLV5-45A0A087WSX0 123 aa5.13□□□□□ -1.59
SYNE2-205ENST00000394768 LINC01600Q96MT4 127 aa5.13□□□□□ -1.59
SYNE2-205ENST00000394768 LINC00304Q8N9R0 145 aa5.13□□□□□ -1.59
SYNE2-205ENST00000394768 GAS8-AS1O95177 125 aa5.12□□□□□ -1.59
SYNE2-205ENST00000394768 DNAH10OSP0CZ25 163 aa5.12□□□□□ -1.59
SYNE2-205ENST00000394768 A8MTW9 85 aa5.12□□□□□ -1.59
SYNE2-205ENST00000394768 LINC00336Q6ZUF6 198 aa5.12□□□□□ -1.59
SYNE2-205ENST00000394768 ST20-AS1Q8NBB2 130 aa5.11□□□□□ -1.59
SYNE2-205ENST00000394768 KRTAP10-9P60411 292 aa5.11□□□□□ -1.59
SYNE2-205ENST00000394768 MRPL34Q9BQ48 92 aaKnown RBP5.11□□□□□ -1.59
SYNE2-205ENST00000394768 LUZP6Q538Z0 58 aa5.1□□□□□ -1.59
SYNE2-205ENST00000394768 Q6ZQT0 140 aa5.1□□□□□ -1.59
SYNE2-205ENST00000394768 Q6ZSN1 163 aa5.1□□□□□ -1.59
SYNE2-205ENST00000394768 PHF5AQ7RTV0 110 aaKnown RBP5.09□□□□□ -1.6
SYNE2-205ENST00000394768 COL4A2P08572 1712 aa5.08□□□□□ -1.6
SYNE2-205ENST00000394768 APLNQ9ULZ1 77 aa5.08□□□□□ -1.6
SYNE2-205ENST00000394768 Q9UF83 564 aa5.08□□□□□ -1.6
SYNE2-205ENST00000394768 CDSNQ15517 529 aa5.08□□□□□ -1.6
SYNE2-205ENST00000394768 LINC00483Q53H64 154 aa5.07□□□□□ -1.6
SYNE2-205ENST00000394768 LINC00588Q9Y4M8 146 aa5.07□□□□□ -1.6
SYNE2-205ENST00000394768 FAM19A4Q96LR4 140 aa5.07□□□□□ -1.6
SYNE2-205ENST00000394768 IGLV8-61A0A075B6I0 122 aa5.06□□□□□ -1.6
SYNE2-205ENST00000394768 CHTF8P0CG12 524 aa5.06□□□□□ -1.6
SYNE2-205ENST00000394768 CDC42SE1Q9NRR8 79 aa5.06□□□□□ -1.6
SYNE2-205ENST00000394768 IGLV6-57P01721 117 aa5.06□□□□□ -1.6
SYNE2-205ENST00000394768 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
SYNE2-205ENST00000394768 Q8NAQ8 132 aa5.05□□□□□ -1.6
SYNE2-205ENST00000394768 ZNF861PO60384 105 aa5.04□□□□□ -1.6
SYNE2-205ENST00000394768 EPG5Q9HCE0 2579 aa5.04□□□□□ -1.6
SYNE2-205ENST00000394768 C9orf163Q8N9P6 203 aa5.04□□□□□ -1.6
SYNE2-205ENST00000394768 IGLV5-37A0A075B6J1 123 aa5.04□□□□□ -1.6
SYNE2-205ENST00000394768 COA5Q86WW8 74 aa5.04□□□□□ -1.6
SYNE2-205ENST00000394768 URB1-AS1Q96HZ7 61 aa5.04□□□□□ -1.6
SYNE2-205ENST00000394768 A0A1B0GVX0 72 aa5.03□□□□□ -1.6
SYNE2-205ENST00000394768 KCNQ1DNQ9H478 68 aa5.02□□□□□ -1.61
SYNE2-205ENST00000394768 A0A096LNJ9 63 aa5.02□□□□□ -1.61
SYNE2-205ENST00000394768 OBSCN-AS1Q96MR7 158 aa5.01□□□□□ -1.61
SYNE2-205ENST00000394768 LINC01554Q52M75 96 aa5.01□□□□□ -1.61
SYNE2-205ENST00000394768 KRTAP24-1Q3LI83 254 aa5□□□□□ -1.61
SYNE2-205ENST00000394768 PRR15Q8IV56 129 aa5□□□□□ -1.61
SYNE2-205ENST00000394768 LINC00310P59036 64 aa5□□□□□ -1.61
SYNE2-205ENST00000394768 CR1P17927 2039 aa5□□□□□ -1.61
SYNE2-205ENST00000394768 C9orf129Q5T035 196 aaKnown RBP5□□□□□ -1.61
SYNE2-205ENST00000394768 MGAM2Q2M2H8 2515 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms