RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 Q8NDZ9 215 aa9.86□□□□□ -0.83
CCT4-201ENST00000394440 A0A1B0GV72 72 aa9.85□□□□□ -0.83
CCT4-201ENST00000394440 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
CCT4-201ENST00000394440 ATXN8Q156A1 80 aa9.85□□□□□ -0.83
CCT4-201ENST00000394440 CASC10Q5T4H9 136 aa9.85□□□□□ -0.83
CCT4-201ENST00000394440 UBE2DNLQ8IWF7 75 aa9.84□□□□□ -0.83
CCT4-201ENST00000394440 STARD9Q9P2P6 4700 aa9.84□□□□□ -0.83
CCT4-201ENST00000394440 LST1O00453 97 aa9.84□□□□□ -0.83
CCT4-201ENST00000394440 OCIAD2Q56VL3 154 aa9.84□□□□□ -0.83
CCT4-201ENST00000394440 CLEC2BQ92478 149 aa9.84□□□□□ -0.83
CCT4-201ENST00000394440 USP17L23D6RBM5 183 aa9.82□□□□□ -0.84
CCT4-201ENST00000394440 LINC01620Q4KN68 170 aa9.82□□□□□ -0.84
CCT4-201ENST00000394440 SMIM11BQ8TCY0 68 aa9.82□□□□□ -0.84
CCT4-201ENST00000394440 PRR3P79522 188 aaKnown RBP9.82□□□□□ -0.84
CCT4-201ENST00000394440 SYCNQ0VAF6 134 aa9.82□□□□□ -0.84
CCT4-201ENST00000394440 NDUFC2-KCTD14E9PQ53 114 aa9.8□□□□□ -0.84
CCT4-201ENST00000394440 C9JAW5 83 aa9.8□□□□□ -0.84
CCT4-201ENST00000394440 SLPIP03973 132 aa9.8□□□□□ -0.84
CCT4-201ENST00000394440 OR13C6PQ8NH95 151 aa9.8□□□□□ -0.84
CCT4-201ENST00000394440 LINC01600Q96MT4 127 aa9.8□□□□□ -0.84
CCT4-201ENST00000394440 ETDBQ3ZM63 59 aa9.79□□□□□ -0.84
CCT4-201ENST00000394440 SS18L2Q9UHA2 77 aa9.79□□□□□ -0.84
CCT4-201ENST00000394440 M0QXV9 152 aa9.79□□□□□ -0.84
CCT4-201ENST00000394440 SLC25A20O43772 301 aa9.79□□□□□ -0.84
CCT4-201ENST00000394440 XAGE1AQ9HD64 81 aa9.79□□□□□ -0.84
CCT4-201ENST00000394440 TENM2Q9NT68 2774 aa9.78□□□□□ -0.84
CCT4-201ENST00000394440 NCR3O14931 201 aa9.78□□□□□ -0.84
CCT4-201ENST00000394440 TMEM126AQ9H061 195 aa9.78□□□□□ -0.84
CCT4-201ENST00000394440 CARD19Q96LW7 228 aa9.77□□□□□ -0.85
CCT4-201ENST00000394440 FAM218AQ96MZ4 157 aa9.77□□□□□ -0.85
CCT4-201ENST00000394440 TRBV10-2A0A0K0K1G8 114 aa9.77□□□□□ -0.85
CCT4-201ENST00000394440 Q6ZRP5 223 aa9.77□□□□□ -0.85
CCT4-201ENST00000394440 TLX1NBP0CAT3 122 aa9.76□□□□□ -0.85
CCT4-201ENST00000394440 DNAH10Q8IVF4 4471 aa9.76□□□□□ -0.85
CCT4-201ENST00000394440 WWC2-AS2Q96NR7 200 aa9.76□□□□□ -0.85
CCT4-201ENST00000394440 VPS13DQ5THJ4 4388 aa9.75□□□□□ -0.85
CCT4-201ENST00000394440 LECT2O14960 151 aa9.75□□□□□ -0.85
CCT4-201ENST00000394440 TRACP01848 142 aa9.75□□□□□ -0.85
CCT4-201ENST00000394440 VPREB1P12018 145 aa9.75□□□□□ -0.85
CCT4-201ENST00000394440 ANKRD29Q8N6D5 301 aa9.75□□□□□ -0.85
CCT4-201ENST00000394440 NBDYA0A0U1RRE5 68 aa9.74□□□□□ -0.85
CCT4-201ENST00000394440 K7ERU9 68 aa9.74□□□□□ -0.85
CCT4-201ENST00000394440 IGLV6-57P01721 117 aa9.74□□□□□ -0.85
CCT4-201ENST00000394440 H0YGX0 51 aa9.74□□□□□ -0.85
CCT4-201ENST00000394440 RPL18AQ02543 176 aaKnown RBP9.74□□□□□ -0.85
CCT4-201ENST00000394440 TTC32Q5I0X7 151 aa9.74□□□□□ -0.85
CCT4-201ENST00000394440 TEN1Q86WV5 123 aa9.74□□□□□ -0.85
CCT4-201ENST00000394440 H3BT86 120 aa9.73□□□□□ -0.85
CCT4-201ENST00000394440 GAGE2EQ4V326 116 aa9.73□□□□□ -0.85
CCT4-201ENST00000394440 GAGE2DQ9UEU5 116 aa9.73□□□□□ -0.85
CCT4-201ENST00000394440 C9orf129Q5T035 196 aaKnown RBP9.72□□□□□ -0.85
CCT4-201ENST00000394440 KMT2CQ8NEZ4 4911 aaKnown RBP9.72□□□□□ -0.85
CCT4-201ENST00000394440 S100A7L2Q5SY68 101 aa9.72□□□□□ -0.85
CCT4-201ENST00000394440 A0A087WYN8 130 aa9.7□□□□□ -0.86
CCT4-201ENST00000394440 PSCAO43653 123 aa9.69□□□□□ -0.86
CCT4-201ENST00000394440 TRBV10-3A0A0K0K1G6 114 aa9.68□□□□□ -0.86
CCT4-201ENST00000394440 Q6ZRN7 208 aaPredicted RBP9.68□□□□□ -0.86
CCT4-201ENST00000394440 SMIM20Q8N5G0 67 aa9.68□□□□□ -0.86
CCT4-201ENST00000394440 C6orf99Q4VX62 202 aa9.68□□□□□ -0.86
CCT4-201ENST00000394440 CNBPP62633 177 aaKnown RBP9.67□□□□□ -0.86
CCT4-201ENST00000394440 M0R378 163 aa9.67□□□□□ -0.86
CCT4-201ENST00000394440 PPDPFLQ8WWR9 84 aa9.67□□□□□ -0.86
CCT4-201ENST00000394440 PLA2G2DQ9UNK4 145 aa9.67□□□□□ -0.86
CCT4-201ENST00000394440 LRCOL1A6NCL2 159 aa9.65□□□□□ -0.86
CCT4-201ENST00000394440 A0A1B0GX51 115 aa9.65□□□□□ -0.86
CCT4-201ENST00000394440 SERTAD4-AS1Q5TG53 156 aa9.65□□□□□ -0.86
CCT4-201ENST00000394440 TRAV23DV6A0A075B6W5 121 aa9.64□□□□□ -0.87
CCT4-201ENST00000394440 LOC107984640A0A0U1RRK4 108 aa9.64□□□□□ -0.87
CCT4-201ENST00000394440 C14orf177Q52M58 125 aa9.64□□□□□ -0.87
CCT4-201ENST00000394440 J3QR89 54 aa9.64□□□□□ -0.87
CCT4-201ENST00000394440 C22orf24Q9Y442 160 aa9.64□□□□□ -0.87
CCT4-201ENST00000394440 LINC00167Q96N53 147 aa9.63□□□□□ -0.87
CCT4-201ENST00000394440 RYR3Q15413 4870 aa9.63□□□□□ -0.87
CCT4-201ENST00000394440 IGLV5-37A0A075B6J1 123 aa9.63□□□□□ -0.87
CCT4-201ENST00000394440 DNAL4O96015 105 aa9.62□□□□□ -0.87
CCT4-201ENST00000394440 BAALC-AS2P0C853 105 aa9.62□□□□□ -0.87
CCT4-201ENST00000394440 TEX49A0A1B0GTD5 131 aa9.62□□□□□ -0.87
CCT4-201ENST00000394440 KRTAP7-1Q8IUC3 87 aa9.62□□□□□ -0.87
CCT4-201ENST00000394440 C3orf84H3BNL1 204 aa9.61□□□□□ -0.87
CCT4-201ENST00000394440 GAGE2BQ13066 116 aa9.61□□□□□ -0.87
CCT4-201ENST00000394440 Q6ZR54 194 aa9.61□□□□□ -0.87
CCT4-201ENST00000394440 Q8N814 137 aa9.61□□□□□ -0.87
CCT4-201ENST00000394440 ZNF73O43830 326 aaPredicted RBP9.61□□□□□ -0.87
CCT4-201ENST00000394440 LINC00575Q6W349 94 aa9.61□□□□□ -0.87
CCT4-201ENST00000394440 DIRC1Q969H9 104 aa9.61□□□□□ -0.87
CCT4-201ENST00000394440 SCGB1A1P11684 91 aa9.6□□□□□ -0.87
CCT4-201ENST00000394440 FAM168BA1KXE4 195 aa9.6□□□□□ -0.87
CCT4-201ENST00000394440 M0R2N4 97 aa9.6□□□□□ -0.87
CCT4-201ENST00000394440 NKAPP1Q8N9T2 125 aa9.6□□□□□ -0.87
CCT4-201ENST00000394440 C7orf33Q8WU49 177 aa9.6□□□□□ -0.87
CCT4-201ENST00000394440 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.59□□□□□ -0.87
CCT4-201ENST00000394440 TRBV7-6A0A0J9YX20 115 aa9.59□□□□□ -0.87
CCT4-201ENST00000394440 KMT2AQ03164 3969 aa9.58□□□□□ -0.88
CCT4-201ENST00000394440 A0A096LNI7 61 aa9.57□□□□□ -0.88
CCT4-201ENST00000394440 C16orf90A8MZG2 172 aa9.57□□□□□ -0.88
CCT4-201ENST00000394440 ELOF1P60002 83 aaKnown RBP9.57□□□□□ -0.88
CCT4-201ENST00000394440 KCNQ1DNQ9H478 68 aa9.57□□□□□ -0.88
CCT4-201ENST00000394440 ORMDL1Q9P0S3 153 aa9.56□□□□□ -0.88
CCT4-201ENST00000394440 C9orf163Q8N9P6 203 aa9.56□□□□□ -0.88
CCT4-201ENST00000394440 hADV29S1A0JD25 119 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms