RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ZNF22P17026 224 aaPredicted RBP8.62□□□□□ -1.03
CHMP3-202ENST00000393773 A0A1B0GVG6 124 aa8.61□□□□□ -1.03
CHMP3-202ENST00000393773 SEC61BP60468 96 aaKnown RBP8.61□□□□□ -1.03
CHMP3-202ENST00000393773 ZNF625Q96I27 306 aaPredicted RBP8.61□□□□□ -1.03
CHMP3-202ENST00000393773 ZNF706Q9Y5V0 76 aaPredicted RBP8.61□□□□□ -1.03
CHMP3-202ENST00000393773 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
CHMP3-202ENST00000393773 A0A096LNJ9 63 aa8.58□□□□□ -1.04
CHMP3-202ENST00000393773 SPINK1P00995 79 aa8.58□□□□□ -1.04
CHMP3-202ENST00000393773 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
CHMP3-202ENST00000393773 TRAV9-1A0A075B6T8 112 aa8.56□□□□□ -1.04
CHMP3-202ENST00000393773 PRYO14603 147 aa8.56□□□□□ -1.04
CHMP3-202ENST00000393773 SPRR1AP35321 89 aa8.56□□□□□ -1.04
CHMP3-202ENST00000393773 LINC00483Q53H64 154 aa8.56□□□□□ -1.04
CHMP3-202ENST00000393773 SFTA2Q6UW10 78 aa8.56□□□□□ -1.04
CHMP3-202ENST00000393773 FA2HQ7L5A8 372 aa8.56□□□□□ -1.04
CHMP3-202ENST00000393773 XP32Q5T750 250 aa8.55□□□□□ -1.04
CHMP3-202ENST00000393773 Q8N377 158 aa8.55□□□□□ -1.04
CHMP3-202ENST00000393773 C11orf86A6NJI1 115 aa8.54□□□□□ -1.04
CHMP3-202ENST00000393773 KRTAP4-16G5E9R7 235 aaPredicted RBP8.54□□□□□ -1.04
CHMP3-202ENST00000393773 RPS29P62273 56 aaKnown RBP8.54□□□□□ -1.04
CHMP3-202ENST00000393773 KRTAP19-2Q3LHN2 52 aa8.54□□□□□ -1.04
CHMP3-202ENST00000393773 SMCR5Q8TEV8 140 aa8.54□□□□□ -1.04
CHMP3-202ENST00000393773 SMCO4Q9NRQ5 59 aa8.54□□□□□ -1.04
CHMP3-202ENST00000393773 NDUFA6P56556 154 aa8.53□□□□□ -1.04
CHMP3-202ENST00000393773 LINC00158P58513 81 aa8.52□□□□□ -1.05
CHMP3-202ENST00000393773 FAM19A2Q8N3H0 131 aa8.52□□□□□ -1.05
CHMP3-202ENST00000393773 NDUFA12Q9UI09 145 aa8.52□□□□□ -1.05
CHMP3-202ENST00000393773 MOBPQ13875 183 aa8.51□□□□□ -1.05
CHMP3-202ENST00000393773 URB1-AS1Q96HZ7 61 aa8.51□□□□□ -1.05
CHMP3-202ENST00000393773 KCNQ1DNQ9H478 68 aa8.51□□□□□ -1.05
CHMP3-202ENST00000393773 NCR3O14931 201 aa8.5□□□□□ -1.05
CHMP3-202ENST00000393773 TMEM170BQ5T4T1 132 aa8.5□□□□□ -1.05
CHMP3-202ENST00000393773 A0A0U1RRA0 63 aa8.49□□□□□ -1.05
CHMP3-202ENST00000393773 IGLV9-49A0A0B4J1Y8 123 aa8.48□□□□□ -1.05
CHMP3-202ENST00000393773 ETDCA0A1B0GVM5 59 aa8.48□□□□□ -1.05
CHMP3-202ENST00000393773 HBDP02042 147 aa8.48□□□□□ -1.05
CHMP3-202ENST00000393773 MT1HP80294 61 aa8.48□□□□□ -1.05
CHMP3-202ENST00000393773 BOD1L2Q8IYS8 172 aa8.48□□□□□ -1.05
CHMP3-202ENST00000393773 PMCHL1Q16048 86 aa8.47□□□□□ -1.05
CHMP3-202ENST00000393773 COX19Q49B96 90 aa8.47□□□□□ -1.05
CHMP3-202ENST00000393773 GAGE2AQ6NT46 116 aa8.47□□□□□ -1.05
CHMP3-202ENST00000393773 TRBV10-3A0A0K0K1G6 114 aa8.46□□□□□ -1.06
CHMP3-202ENST00000393773 SLC25A20O43772 301 aa8.46□□□□□ -1.06
CHMP3-202ENST00000393773 ERC2-IT1O76042 136 aa8.46□□□□□ -1.06
CHMP3-202ENST00000393773 SMIM13P0DJ93 91 aa8.46□□□□□ -1.06
CHMP3-202ENST00000393773 FABP9Q0Z7S8 132 aa8.46□□□□□ -1.06
CHMP3-202ENST00000393773 BAGE3Q86Y29 109 aa8.46□□□□□ -1.06
CHMP3-202ENST00000393773 B5MCH6 92 aa8.45□□□□□ -1.06
CHMP3-202ENST00000393773 S100PP25815 95 aa8.45□□□□□ -1.06
CHMP3-202ENST00000393773 SSBP3-AS1Q7Z2R9 100 aa8.45□□□□□ -1.06
CHMP3-202ENST00000393773 MIR7-3HGQ8N6C7 128 aa8.45□□□□□ -1.06
CHMP3-202ENST00000393773 C18orf32Q8TCD1 76 aa8.45□□□□□ -1.06
CHMP3-202ENST00000393773 TMEM223A0PJW6 202 aa8.44□□□□□ -1.06
CHMP3-202ENST00000393773 Q9BRP9 147 aa8.44□□□□□ -1.06
CHMP3-202ENST00000393773 TMEM218A2RU14 115 aa8.42□□□□□ -1.06
CHMP3-202ENST00000393773 LINC00614P0C842 121 aa8.42□□□□□ -1.06
CHMP3-202ENST00000393773 CHTOPQ9Y3Y2 248 aaKnown RBP8.42□□□□□ -1.06
CHMP3-202ENST00000393773 CFC1BP0CG36 223 aa8.41□□□□□ -1.06
CHMP3-202ENST00000393773 MEIG1Q5JSS6 88 aa8.41□□□□□ -1.06
CHMP3-202ENST00000393773 CLLU1Q5K131 121 aa8.41□□□□□ -1.06
CHMP3-202ENST00000393773 SEC11CQ9BY50 192 aa8.41□□□□□ -1.06
CHMP3-202ENST00000393773 ATP6V1G1O75348 118 aa8.4□□□□□ -1.06
CHMP3-202ENST00000393773 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
CHMP3-202ENST00000393773 UQCC3Q6UW78 93 aa8.4□□□□□ -1.06
CHMP3-202ENST00000393773 Q6ZRX8 168 aa8.4□□□□□ -1.06
CHMP3-202ENST00000393773 FLGP20930 4061 aaPredicted RBP8.4□□□□□ -1.07
CHMP3-202ENST00000393773 HERV-K104P63124 156 aa8.38□□□□□ -1.07
CHMP3-202ENST00000393773 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
CHMP3-202ENST00000393773 DDTP30046 118 aa8.37□□□□□ -1.07
CHMP3-202ENST00000393773 KRTAP10-6P60371 365 aaPredicted RBP8.37□□□□□ -1.07
CHMP3-202ENST00000393773 PCOTHQ58A44 107 aa8.37□□□□□ -1.07
CHMP3-202ENST00000393773 S100A12P80511 92 aa8.36□□□□□ -1.07
CHMP3-202ENST00000393773 C9orf153Q5TBE3 101 aa8.36□□□□□ -1.07
CHMP3-202ENST00000393773 IGLV8-61A0A075B6I0 122 aa8.35□□□□□ -1.07
CHMP3-202ENST00000393773 LOC107984156A0A0G2JMH3 177 aa8.35□□□□□ -1.07
CHMP3-202ENST00000393773 TRBV10-2A0A0K0K1G8 114 aa8.35□□□□□ -1.07
CHMP3-202ENST00000393773 ARL17AQ8IVW1 177 aa8.35□□□□□ -1.07
CHMP3-202ENST00000393773 TSPEAR-AS2P59090 65 aa8.34□□□□□ -1.07
CHMP3-202ENST00000393773 TRAPPC1Q9Y5R8 145 aa8.34□□□□□ -1.07
CHMP3-202ENST00000393773 LINC00587B1AMM8 73 aa8.33□□□□□ -1.08
CHMP3-202ENST00000393773 RHEBQ15382 184 aa8.33□□□□□ -1.08
CHMP3-202ENST00000393773 IFI27L1Q96BM0 104 aa8.33□□□□□ -1.08
CHMP3-202ENST00000393773 MAP1LC3CQ9BXW4 147 aa8.33□□□□□ -1.08
CHMP3-202ENST00000393773 MYMXA0A1B0GTQ4 84 aa8.32□□□□□ -1.08
CHMP3-202ENST00000393773 IGLV6-57P01721 117 aa8.32□□□□□ -1.08
CHMP3-202ENST00000393773 SPANXB1Q9NS25 103 aaPredicted RBP8.32□□□□□ -1.08
CHMP3-202ENST00000393773 C10orf91Q5T1B1 145 aa8.31□□□□□ -1.08
CHMP3-202ENST00000393773 ST20-AS1Q8NBB2 130 aa8.31□□□□□ -1.08
CHMP3-202ENST00000393773 RPS10P5Q9NQ39 176 aa8.31□□□□□ -1.08
CHMP3-202ENST00000393773 C9orf92A6NGG3 77 aa8.3□□□□□ -1.08
CHMP3-202ENST00000393773 TRAV23DV6A0A075B6W5 121 aa8.29□□□□□ -1.08
CHMP3-202ENST00000393773 JOSD1Q15040 202 aaPredicted RBP8.28□□□□□ -1.08
CHMP3-202ENST00000393773 LIMD2Q9BT23 127 aa8.28□□□□□ -1.08
CHMP3-202ENST00000393773 NDUFC2O95298 119 aa8.27□□□□□ -1.09
CHMP3-202ENST00000393773 CHCHD1Q96BP2 118 aaKnown RBP8.27□□□□□ -1.09
CHMP3-202ENST00000393773 ZNF73O43830 326 aaPredicted RBP8.26□□□□□ -1.09
CHMP3-202ENST00000393773 S100A7L2Q5SY68 101 aa8.26□□□□□ -1.09
CHMP3-202ENST00000393773 C5orf52A6NGY3 159 aa8.25□□□□□ -1.09
CHMP3-202ENST00000393773 SPRR1BP22528 89 aa8.25□□□□□ -1.09
CHMP3-202ENST00000393773 IFITM2Q01629 132 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms