RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 TRBV10-2A0A0K0K1G8 114 aa8.32□□□□□ -1.08
USP44-202ENST00000393091 A0A1W2PNN7 141 aa8.32□□□□□ -1.08
USP44-202ENST00000393091 MEIG1Q5JSS6 88 aa8.32□□□□□ -1.08
USP44-202ENST00000393091 ADAMTSL4-AS1Q5T5F5 129 aa8.32□□□□□ -1.08
USP44-202ENST00000393091 CHTF8P0CG12 524 aa8.32□□□□□ -1.08
USP44-202ENST00000393091 GAGE2BQ13066 116 aa8.31□□□□□ -1.08
USP44-202ENST00000393091 MIR7-3HGQ8N6C7 128 aa8.31□□□□□ -1.08
USP44-202ENST00000393091 LINC00158P58513 81 aa8.3□□□□□ -1.08
USP44-202ENST00000393091 KRTAP10-4P60372 401 aaPredicted RBP8.3□□□□□ -1.08
USP44-202ENST00000393091 RPL24P83731 157 aaKnown RBP8.3□□□□□ -1.08
USP44-202ENST00000393091 TAL2Q16559 108 aa8.3□□□□□ -1.08
USP44-202ENST00000393091 TTTY13Q9BZ97 58 aa8.3□□□□□ -1.08
USP44-202ENST00000393091 PFN2P35080 140 aa8.29□□□□□ -1.08
USP44-202ENST00000393091 LINC00308Q8TCZ7 52 aa8.29□□□□□ -1.08
USP44-202ENST00000393091 SERTAD4-AS1Q5TG53 156 aa8.29□□□□□ -1.08
USP44-202ENST00000393091 C2orf91Q6ZV80 131 aa8.29□□□□□ -1.08
USP44-202ENST00000393091 LBHQ53QV2 105 aaPredicted RBP8.28□□□□□ -1.08
USP44-202ENST00000393091 SOSTDC1Q6X4U4 206 aa8.28□□□□□ -1.08
USP44-202ENST00000393091 GAGE2EQ4V326 116 aa8.28□□□□□ -1.08
USP44-202ENST00000393091 SLC25A34Q6PIV7 304 aa8.28□□□□□ -1.08
USP44-202ENST00000393091 Q8NDZ9 215 aa8.28□□□□□ -1.08
USP44-202ENST00000393091 GAGE2DQ9UEU5 116 aa8.28□□□□□ -1.08
USP44-202ENST00000393091 HERC2O95714 4834 aa8.28□□□□□ -1.08
USP44-202ENST00000393091 PAM16Q9Y3D7 125 aa8.28□□□□□ -1.08
USP44-202ENST00000393091 S100A12P80511 92 aa8.27□□□□□ -1.09
USP44-202ENST00000393091 C22orf24Q9Y442 160 aa8.27□□□□□ -1.09
USP44-202ENST00000393091 IGKV2-24A0A0C4DH68 120 aa8.26□□□□□ -1.09
USP44-202ENST00000393091 FAM168BA1KXE4 195 aa8.26□□□□□ -1.09
USP44-202ENST00000393091 Q8N1X5 172 aa8.26□□□□□ -1.09
USP44-202ENST00000393091 M0R378 163 aa8.26□□□□□ -1.09
USP44-202ENST00000393091 XAGE1AQ9HD64 81 aa8.26□□□□□ -1.09
USP44-202ENST00000393091 MRPL55Q7Z7F7 128 aaKnown RBP8.25□□□□□ -1.09
USP44-202ENST00000393091 IGLV1-50A0A075B6I6 118 aa8.24□□□□□ -1.09
USP44-202ENST00000393091 SCGB1D4Q6XE38 83 aa8.24□□□□□ -1.09
USP44-202ENST00000393091 M0QXV9 152 aa8.24□□□□□ -1.09
USP44-202ENST00000393091 UQCR10Q9UDW1 63 aa8.24□□□□□ -1.09
USP44-202ENST00000393091 IGLV6-57P01721 117 aa8.24□□□□□ -1.09
USP44-202ENST00000393091 EIF4EBP3O60516 100 aaPredicted RBP8.23□□□□□ -1.09
USP44-202ENST00000393091 SPRR1AP35321 89 aa8.23□□□□□ -1.09
USP44-202ENST00000393091 LINC00518Q8N0U6 118 aa8.22□□□□□ -1.09
USP44-202ENST00000393091 C7orf33Q8WU49 177 aa8.22□□□□□ -1.09
USP44-202ENST00000393091 KRTAP17-1Q9BYP8 105 aa8.22□□□□□ -1.09
USP44-202ENST00000393091 KCNQ1DNQ9H478 68 aa8.22□□□□□ -1.09
USP44-202ENST00000393091 C14orf144Q96I85 54 aa8.22□□□□□ -1.09
USP44-202ENST00000393091 MIEN1Q9BRT3 115 aa8.22□□□□□ -1.09
USP44-202ENST00000393091 CBY1Q9Y3M2 126 aa8.22□□□□□ -1.09
USP44-202ENST00000393091 LINC00167Q96N53 147 aa8.22□□□□□ -1.09
USP44-202ENST00000393091 PRR3P79522 188 aaKnown RBP8.21□□□□□ -1.09
USP44-202ENST00000393091 FAM19A5Q7Z5A7 132 aaPredicted RBP8.21□□□□□ -1.09
USP44-202ENST00000393091 IGKV2-28A0A075B6P5 120 aa8.21□□□□□ -1.1
USP44-202ENST00000393091 H0Y9J4 135 aa8.21□□□□□ -1.1
USP44-202ENST00000393091 IGKV2D-28P01615 120 aa8.21□□□□□ -1.1
USP44-202ENST00000393091 PRYO14603 147 aa8.2□□□□□ -1.1
USP44-202ENST00000393091 PHF5AQ7RTV0 110 aaKnown RBP8.2□□□□□ -1.1
USP44-202ENST00000393091 MUSTN1Q8IVN3 82 aa8.2□□□□□ -1.1
USP44-202ENST00000393091 LINC00528Q8N1L1 170 aa8.2□□□□□ -1.1
USP44-202ENST00000393091 DAND5Q8N907 189 aa8.2□□□□□ -1.1
USP44-202ENST00000393091 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
USP44-202ENST00000393091 KIAA1109Q2LD37 5005 aa8.19□□□□□ -1.1
USP44-202ENST00000393091 KRTAP4-16G5E9R7 235 aaPredicted RBP8.19□□□□□ -1.1
USP44-202ENST00000393091 KRTAP13-1Q8IUC0 172 aa8.19□□□□□ -1.1
USP44-202ENST00000393091 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
USP44-202ENST00000393091 PLA2G1BP04054 148 aaKnown RBP8.18□□□□□ -1.1
USP44-202ENST00000393091 TRBV7-6A0A0J9YX20 115 aa8.18□□□□□ -1.1
USP44-202ENST00000393091 HSD52Q0P140 79 aa8.18□□□□□ -1.1
USP44-202ENST00000393091 SRSF9Q13242 221 aaKnown RBP eCLIP8.18□□□□□ -1.1
USP44-202ENST00000393091 LINC00337Q8N6G1 96 aa8.18□□□□□ -1.1
USP44-202ENST00000393091 C12orf57Q99622 126 aa8.18□□□□□ -1.1
USP44-202ENST00000393091 CEND1Q8N111 149 aa8.17□□□□□ -1.1
USP44-202ENST00000393091 A0A0U1RRA0 63 aa8.17□□□□□ -1.1
USP44-202ENST00000393091 A0A1B0GWB2 263 aa8.17□□□□□ -1.1
USP44-202ENST00000393091 FAM229AH3BQW9 127 aa8.17□□□□□ -1.1
USP44-202ENST00000393091 RPL37AP61513 92 aaKnown RBP8.16□□□□□ -1.1
USP44-202ENST00000393091 PSORS1C2Q9UIG4 136 aa8.16□□□□□ -1.1
USP44-202ENST00000393091 A0A0B4J2C4 111 aa8.16□□□□□ -1.1
USP44-202ENST00000393091 DPH3Q96FX2 82 aa8.16□□□□□ -1.1
USP44-202ENST00000393091 TRAV13-2A0A0B4J235 113 aa8.15□□□□□ -1.1
USP44-202ENST00000393091 BCE1O60756 84 aa8.15□□□□□ -1.1
USP44-202ENST00000393091 TMEM126AQ9H061 195 aa8.15□□□□□ -1.11
USP44-202ENST00000393091 HIST1H4GQ99525 98 aa8.14□□□□□ -1.11
USP44-202ENST00000393091 Q5VSD8 79 aa8.14□□□□□ -1.11
USP44-202ENST00000393091 DDTP30046 118 aa8.14□□□□□ -1.11
USP44-202ENST00000393091 REG3GQ6UW15 175 aa8.13□□□□□ -1.11
USP44-202ENST00000393091 TRBV10-3A0A0K0K1G6 114 aa8.13□□□□□ -1.11
USP44-202ENST00000393091 A4D1N5 150 aa8.12□□□□□ -1.11
USP44-202ENST00000393091 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
USP44-202ENST00000393091 NCR3O14931 201 aa8.12□□□□□ -1.11
USP44-202ENST00000393091 SPINK6Q6UWN8 80 aa8.12□□□□□ -1.11
USP44-202ENST00000393091 FAT1Q14517 4588 aa8.12□□□□□ -1.11
USP44-202ENST00000393091 TSTD3H0UI37 97 aa8.12□□□□□ -1.11
USP44-202ENST00000393091 TMEM238LA0A1B0GVL6 79 aa8.11□□□□□ -1.11
USP44-202ENST00000393091 A6NJY4 79 aa8.11□□□□□ -1.11
USP44-202ENST00000393091 HAMPP81172 84 aa8.11□□□□□ -1.11
USP44-202ENST00000393091 CFC1BP0CG36 223 aa8.1□□□□□ -1.11
USP44-202ENST00000393091 CFC1P0CG37 223 aa8.1□□□□□ -1.11
USP44-202ENST00000393091 TRAV23DV6A0A075B6W5 121 aa8.1□□□□□ -1.11
USP44-202ENST00000393091 HNRNPA3P51991 378 aaKnown RBP8.1□□□□□ -1.11
USP44-202ENST00000393091 NPC2P61916 151 aa8.1□□□□□ -1.11
USP44-202ENST00000393091 UBE2BP63146 152 aa8.1□□□□□ -1.11
USP44-202ENST00000393091 B5MCH6 92 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms