RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 FAM236CP0DP71 79 aa10.37□□□□□ -0.75
SHTN1-204ENST00000392903 UBL5Q9BZL1 73 aa10.37□□□□□ -0.75
SHTN1-204ENST00000392903 X6R8D5 127 aa10.37□□□□□ -0.75
SHTN1-204ENST00000392903 BCE1O60756 84 aa10.36□□□□□ -0.75
SHTN1-204ENST00000392903 A0A096LPF7 62 aa10.35□□□□□ -0.75
SHTN1-204ENST00000392903 DEFB135Q30KP9 77 aa10.35□□□□□ -0.75
SHTN1-204ENST00000392903 C9orf66Q5T8R8 295 aa10.35□□□□□ -0.75
SHTN1-204ENST00000392903 GYPEP15421 78 aa10.34□□□□□ -0.75
SHTN1-204ENST00000392903 NANOS2P60321 138 aaKnown RBP10.34□□□□□ -0.75
SHTN1-204ENST00000392903 SERP1Q9Y6X1 66 aa10.34□□□□□ -0.75
SHTN1-204ENST00000392903 TRAV7A0A075B6U4 112 aa10.33□□□□□ -0.76
SHTN1-204ENST00000392903 H7BZZ5 65 aa10.33□□□□□ -0.76
SHTN1-204ENST00000392903 C6orf226Q5I0X4 101 aa10.33□□□□□ -0.76
SHTN1-204ENST00000392903 F8P00451 2351 aa10.31□□□□□ -0.76
SHTN1-204ENST00000392903 KLKP1Q107X0 134 aa10.3□□□□□ -0.76
SHTN1-204ENST00000392903 LINC00612Q8N6U2 182 aa10.3□□□□□ -0.76
SHTN1-204ENST00000392903 LINC00959A0A1B0GUT2 108 aa10.29□□□□□ -0.76
SHTN1-204ENST00000392903 Q6ZQT0 140 aa10.28□□□□□ -0.76
SHTN1-204ENST00000392903 Q8IZM0 81 aa10.28□□□□□ -0.76
SHTN1-204ENST00000392903 C11orf68Q9H3H3 251 aaKnown RBP10.28□□□□□ -0.76
SHTN1-204ENST00000392903 PRO0255Q9UI72 69 aa10.28□□□□□ -0.76
SHTN1-204ENST00000392903 CLPSL2Q6UWE3 100 aa10.27□□□□□ -0.76
SHTN1-204ENST00000392903 PRO0628Q9UI54 55 aa10.27□□□□□ -0.76
SHTN1-204ENST00000392903 LOC110117498A0A087WWA1 95 aa10.27□□□□□ -0.77
SHTN1-204ENST00000392903 IGHV4-28A0A0C4DH34 117 aa10.26□□□□□ -0.77
SHTN1-204ENST00000392903 PRR3P79522 188 aaKnown RBP10.26□□□□□ -0.77
SHTN1-204ENST00000392903 PKD1L1Q8TDX9 2849 aa10.26□□□□□ -0.77
SHTN1-204ENST00000392903 RBM3P98179 157 aaKnown RBP10.25□□□□□ -0.77
SHTN1-204ENST00000392903 LINC01547P58512 204 aaPredicted RBP10.25□□□□□ -0.77
SHTN1-204ENST00000392903 STAB1Q9NY15 2570 aa10.24□□□□□ -0.77
SHTN1-204ENST00000392903 APOC4P55056 127 aa10.24□□□□□ -0.77
SHTN1-204ENST00000392903 ZNF561-AS1K7EIQ3 104 aa10.24□□□□□ -0.77
SHTN1-204ENST00000392903 LINC00336Q6ZUF6 198 aa10.24□□□□□ -0.77
SHTN1-204ENST00000392903 CELA1Q9UNI1 258 aa10.24□□□□□ -0.77
SHTN1-204ENST00000392903 LYRM9A8MSI8 78 aa10.23□□□□□ -0.77
SHTN1-204ENST00000392903 COX17Q14061 63 aa10.23□□□□□ -0.77
SHTN1-204ENST00000392903 LINC00575Q6W349 94 aa10.23□□□□□ -0.77
SHTN1-204ENST00000392903 DAD1P61803 113 aa10.23□□□□□ -0.77
SHTN1-204ENST00000392903 C6orf99Q4VX62 202 aa10.23□□□□□ -0.77
SHTN1-204ENST00000392903 C6orf223Q8N319 242 aa10.23□□□□□ -0.77
SHTN1-204ENST00000392903 Q8N3U1 123 aa10.23□□□□□ -0.77
SHTN1-204ENST00000392903 HTN3P15516 51 aa10.22□□□□□ -0.77
SHTN1-204ENST00000392903 SMIM26A0A096LP01 95 aa10.22□□□□□ -0.77
SHTN1-204ENST00000392903 Q6ZVQ6 151 aa10.22□□□□□ -0.77
SHTN1-204ENST00000392903 TRAV10A0A0B4J240 114 aa10.21□□□□□ -0.77
SHTN1-204ENST00000392903 CXCL6P80162 114 aa10.21□□□□□ -0.77
SHTN1-204ENST00000392903 IGHV4-30-4P0DP06 118 aa10.21□□□□□ -0.78
SHTN1-204ENST00000392903 HAMPP81172 84 aa10.2□□□□□ -0.78
SHTN1-204ENST00000392903 Q8NAQ8 132 aa10.2□□□□□ -0.78
SHTN1-204ENST00000392903 A0A1B0GUV1 79 aa10.19□□□□□ -0.78
SHTN1-204ENST00000392903 FP248Q71RG6 208 aaPredicted RBP10.19□□□□□ -0.78
SHTN1-204ENST00000392903 LINC00269Q8N2A0 174 aa10.19□□□□□ -0.78
SHTN1-204ENST00000392903 SNURFQ9Y675 71 aa10.19□□□□□ -0.78
SHTN1-204ENST00000392903 F8WEM9 126 aa10.19□□□□□ -0.78
SHTN1-204ENST00000392903 M0R2N4 97 aa10.19□□□□□ -0.78
SHTN1-204ENST00000392903 RMI2Q96E14 147 aa10.19□□□□□ -0.78
SHTN1-204ENST00000392903 IGLV10-54A0A075B6I4 117 aa10.18□□□□□ -0.78
SHTN1-204ENST00000392903 NDUFC1O43677 76 aa10.18□□□□□ -0.78
SHTN1-204ENST00000392903 PDE6GP18545 87 aa10.18□□□□□ -0.78
SHTN1-204ENST00000392903 LAMTOR3Q9UHA4 124 aa10.18□□□□□ -0.78
SHTN1-204ENST00000392903 KIAA0087Q14695 138 aa10.18□□□□□ -0.78
SHTN1-204ENST00000392903 OXLD1Q5BKU9 147 aa10.18□□□□□ -0.78
SHTN1-204ENST00000392903 FBN1P35555 2871 aaKnown RBP10.18□□□□□ -0.78
SHTN1-204ENST00000392903 MAST4O15021 2626 aa10.17□□□□□ -0.78
SHTN1-204ENST00000392903 ANGP03950 147 aaKnown RBP10.16□□□□□ -0.78
SHTN1-204ENST00000392903 MIFP14174 115 aa10.16□□□□□ -0.78
SHTN1-204ENST00000392903 Q8NDZ9 215 aa10.16□□□□□ -0.78
SHTN1-204ENST00000392903 ATP5EP56381 51 aaPredicted RBP10.16□□□□□ -0.78
SHTN1-204ENST00000392903 H3BQ85 93 aa10.15□□□□□ -0.78
SHTN1-204ENST00000392903 SPART-AS1P0CW21 52 aa10.15□□□□□ -0.78
SHTN1-204ENST00000392903 TRBV7-4A0A0J9YYF1 115 aa10.14□□□□□ -0.79
SHTN1-204ENST00000392903 TRBV7-6A0A0J9YX20 115 aa10.13□□□□□ -0.79
SHTN1-204ENST00000392903 REG3AQ06141 175 aa10.13□□□□□ -0.79
SHTN1-204ENST00000392903 NOTCH1P46531 2555 aa10.12□□□□□ -0.79
SHTN1-204ENST00000392903 C9orf116Q5BN46 136 aaPredicted RBP10.12□□□□□ -0.79
SHTN1-204ENST00000392903 CD164L2Q6UWJ8 174 aa10.12□□□□□ -0.79
SHTN1-204ENST00000392903 TM2D3Q9BRN9 247 aa10.12□□□□□ -0.79
SHTN1-204ENST00000392903 TENM3Q9P273 2699 aa10.12□□□□□ -0.79
SHTN1-204ENST00000392903 CHCHD10Q8WYQ3 142 aaPredicted RBP10.12□□□□□ -0.79
SHTN1-204ENST00000392903 MUC7Q8TAX7 377 aa10.11□□□□□ -0.79
SHTN1-204ENST00000392903 RETNQ9HD89 108 aa10.11□□□□□ -0.79
SHTN1-204ENST00000392903 Q6ZQY7 126 aa10.11□□□□□ -0.79
SHTN1-204ENST00000392903 C1orf43Q9BWL3 253 aa10.11□□□□□ -0.79
SHTN1-204ENST00000392903 ANK2Q01484 3957 aa10.11□□□□□ -0.79
SHTN1-204ENST00000392903 IGLV6-57P01721 117 aa10.1□□□□□ -0.79
SHTN1-204ENST00000392903 KRTAP10-11P60412 298 aa10.1□□□□□ -0.79
SHTN1-204ENST00000392903 ERC2-IT1O76042 136 aa10.08□□□□□ -0.8
SHTN1-204ENST00000392903 LINC00474Q9P2X8 69 aa10.08□□□□□ -0.8
SHTN1-204ENST00000392903 COL6A5A8TX70 2615 aa10.07□□□□□ -0.8
SHTN1-204ENST00000392903 NREPQ16612 68 aa10.07□□□□□ -0.8
SHTN1-204ENST00000392903 KRTAP24-1Q3LI83 254 aa10.07□□□□□ -0.8
SHTN1-204ENST00000392903 KLK12Q9UKR0 248 aa10.06□□□□□ -0.8
SHTN1-204ENST00000392903 TMEM254Q8TBM7 123 aa10.06□□□□□ -0.8
SHTN1-204ENST00000392903 LELP1Q5T871 98 aa10.05□□□□□ -0.8
SHTN1-204ENST00000392903 SCXQ7RTU7 201 aa10.05□□□□□ -0.8
SHTN1-204ENST00000392903 BPY2O14599 106 aa10.04□□□□□ -0.8
SHTN1-204ENST00000392903 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.04□□□□□ -0.8
SHTN1-204ENST00000392903 PKIGQ9Y2B9 76 aa10.04□□□□□ -0.8
SHTN1-204ENST00000392903 A0A0J9YWU9 116 aa10.02□□□□□ -0.81
SHTN1-204ENST00000392903 C10orf25Q5T742 122 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms