RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 F8P00451 2351 aa10.15□□□□□ -0.78
VPS9D1-201ENST00000389386 IGLV4-60A0A075B6I1 120 aa10.14□□□□□ -0.79
VPS9D1-201ENST00000389386 C11orf68Q9H3H3 251 aaKnown RBP10.14□□□□□ -0.79
VPS9D1-201ENST00000389386 ATP5EP56381 51 aaPredicted RBP10.14□□□□□ -0.79
VPS9D1-201ENST00000389386 MAP6D1Q9H9H5 199 aa10.14□□□□□ -0.79
VPS9D1-201ENST00000389386 C6orf226Q5I0X4 101 aa10.13□□□□□ -0.79
VPS9D1-201ENST00000389386 TM2D3Q9BRN9 247 aa10.13□□□□□ -0.79
VPS9D1-201ENST00000389386 TRBV7-4A0A0J9YYF1 115 aa10.13□□□□□ -0.79
VPS9D1-201ENST00000389386 ESM1Q9NQ30 184 aa10.13□□□□□ -0.79
VPS9D1-201ENST00000389386 CXCL6P80162 114 aa10.12□□□□□ -0.79
VPS9D1-201ENST00000389386 DNAJC9-AS1A6NH13 148 aa10.12□□□□□ -0.79
VPS9D1-201ENST00000389386 MIFP14174 115 aa10.12□□□□□ -0.79
VPS9D1-201ENST00000389386 C1orf158Q8N1D5 194 aa10.12□□□□□ -0.79
VPS9D1-201ENST00000389386 Q8N3U1 123 aa10.12□□□□□ -0.79
VPS9D1-201ENST00000389386 C6orf223Q8N319 242 aa10.11□□□□□ -0.79
VPS9D1-201ENST00000389386 ZNF561-AS1K7EIQ3 104 aa10.1□□□□□ -0.79
VPS9D1-201ENST00000389386 LOC100131303A0A0U1RQF7 123 aa10.1□□□□□ -0.79
VPS9D1-201ENST00000389386 LINC00575Q6W349 94 aa10.1□□□□□ -0.79
VPS9D1-201ENST00000389386 PMAIP1Q13794 54 aa10.09□□□□□ -0.79
VPS9D1-201ENST00000389386 FAM229BQ4G0N7 80 aa10.09□□□□□ -0.79
VPS9D1-201ENST00000389386 C6orf99Q4VX62 202 aa10.09□□□□□ -0.79
VPS9D1-201ENST00000389386 DYNLRB2Q8TF09 96 aa10.09□□□□□ -0.79
VPS9D1-201ENST00000389386 LAMTOR3Q9UHA4 124 aa10.08□□□□□ -0.8
VPS9D1-201ENST00000389386 INAFM1C9JVW0 142 aa10.07□□□□□ -0.8
VPS9D1-201ENST00000389386 C4orf3Q8WVX3 66 aa10.07□□□□□ -0.8
VPS9D1-201ENST00000389386 LINC00959A0A1B0GUT2 108 aa10.06□□□□□ -0.8
VPS9D1-201ENST00000389386 MPLKIPQ8TAP9 179 aa10.06□□□□□ -0.8
VPS9D1-201ENST00000389386 C9orf66Q5T8R8 295 aa10.06□□□□□ -0.8
VPS9D1-201ENST00000389386 TMEM254Q8TBM7 123 aa10.06□□□□□ -0.8
VPS9D1-201ENST00000389386 TRBV6-8A0A0A6YYG3 113 aa10.05□□□□□ -0.8
VPS9D1-201ENST00000389386 NREPQ16612 68 aa10.05□□□□□ -0.8
VPS9D1-201ENST00000389386 Q8IZM0 81 aa10.05□□□□□ -0.8
VPS9D1-201ENST00000389386 NOP10Q9NPE3 64 aaKnown RBP10.05□□□□□ -0.8
VPS9D1-201ENST00000389386 PDE6GP18545 87 aa10.04□□□□□ -0.8
VPS9D1-201ENST00000389386 DEFB114Q30KQ6 69 aa10.04□□□□□ -0.8
VPS9D1-201ENST00000389386 RETNQ9HD89 108 aa10.04□□□□□ -0.8
VPS9D1-201ENST00000389386 ERC2-IT1O76042 136 aa10.03□□□□□ -0.8
VPS9D1-201ENST00000389386 CYSRT1A8MQ03 144 aa10.03□□□□□ -0.8
VPS9D1-201ENST00000389386 SCXQ7RTU7 201 aa10.03□□□□□ -0.8
VPS9D1-201ENST00000389386 Q8NDZ9 215 aa10.03□□□□□ -0.8
VPS9D1-201ENST00000389386 VWFP04275 2813 aa10.02□□□□□ -0.81
VPS9D1-201ENST00000389386 TENM1Q9UKZ4 2725 aa10.02□□□□□ -0.81
VPS9D1-201ENST00000389386 SPATA3Q8NHX4 192 aa10.01□□□□□ -0.81
VPS9D1-201ENST00000389386 ATRQ13535 2644 aa10.01□□□□□ -0.81
VPS9D1-201ENST00000389386 CCL24O00175 119 aa10.01□□□□□ -0.81
VPS9D1-201ENST00000389386 BPY2O14599 106 aa10.01□□□□□ -0.81
VPS9D1-201ENST00000389386 ODF3L2Q3SX64 289 aa10.01□□□□□ -0.81
VPS9D1-201ENST00000389386 MUC7Q8TAX7 377 aa10.01□□□□□ -0.81
VPS9D1-201ENST00000389386 STHQ8IWL8 128 aa10□□□□□ -0.81
VPS9D1-201ENST00000389386 MAST4O15021 2626 aa10□□□□□ -0.81
VPS9D1-201ENST00000389386 NBEAL2Q6ZNJ1 2754 aa10□□□□□ -0.81
VPS9D1-201ENST00000389386 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
VPS9D1-201ENST00000389386 COX17Q14061 63 aa9.99□□□□□ -0.81
VPS9D1-201ENST00000389386 LINC01006Q8NI28 216 aa9.99□□□□□ -0.81
VPS9D1-201ENST00000389386 WFDC10AQ9H1F0 79 aa9.99□□□□□ -0.81
VPS9D1-201ENST00000389386 ESRGQ1W209 222 aa9.98□□□□□ -0.81
VPS9D1-201ENST00000389386 Q6ZQY7 126 aa9.98□□□□□ -0.81
VPS9D1-201ENST00000389386 TRGV4A0A0C4DH28 118 aa9.98□□□□□ -0.81
VPS9D1-201ENST00000389386 KIAA0087Q14695 138 aa9.98□□□□□ -0.81
VPS9D1-201ENST00000389386 Q6ZTC4 211 aa9.98□□□□□ -0.81
VPS9D1-201ENST00000389386 PLAC8L1A1L4L8 177 aa9.97□□□□□ -0.81
VPS9D1-201ENST00000389386 C9orf116Q5BN46 136 aaPredicted RBP9.97□□□□□ -0.81
VPS9D1-201ENST00000389386 PRR15Q8IV56 129 aa9.97□□□□□ -0.81
VPS9D1-201ENST00000389386 PRYO14603 147 aa9.96□□□□□ -0.81
VPS9D1-201ENST00000389386 FUSP35637 526 aaKnown RBP eCLIP9.96□□□□□ -0.81
VPS9D1-201ENST00000389386 H3BQ85 93 aa9.95□□□□□ -0.82
VPS9D1-201ENST00000389386 Q6ZRU5 148 aa9.95□□□□□ -0.82
VPS9D1-201ENST00000389386 OCR1Q9BZK8 76 aa9.94□□□□□ -0.82
VPS9D1-201ENST00000389386 IGHV4-28A0A0C4DH34 117 aa9.94□□□□□ -0.82
VPS9D1-201ENST00000389386 CD164Q04900 197 aa9.94□□□□□ -0.82
VPS9D1-201ENST00000389386 CLPSL2Q6UWE3 100 aa9.92□□□□□ -0.82
VPS9D1-201ENST00000389386 C16orf74Q96GX8 76 aa9.92□□□□□ -0.82
VPS9D1-201ENST00000389386 IGLV6-57P01721 117 aa9.91□□□□□ -0.82
VPS9D1-201ENST00000389386 GIG44P09565 113 aaPredicted RBP9.91□□□□□ -0.82
VPS9D1-201ENST00000389386 CD164L2Q6UWJ8 174 aa9.91□□□□□ -0.82
VPS9D1-201ENST00000389386 A0A1B0GUV1 79 aa9.91□□□□□ -0.82
VPS9D1-201ENST00000389386 LINC00269Q8N2A0 174 aa9.91□□□□□ -0.82
VPS9D1-201ENST00000389386 Q8N9L7 120 aa9.91□□□□□ -0.82
VPS9D1-201ENST00000389386 IGKV4-1P06312 121 aa9.9□□□□□ -0.82
VPS9D1-201ENST00000389386 HIGD2AQ9BW72 106 aa9.89□□□□□ -0.83
VPS9D1-201ENST00000389386 TRRAPQ9Y4A5 3859 aa9.88□□□□□ -0.83
VPS9D1-201ENST00000389386 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.87□□□□□ -0.83
VPS9D1-201ENST00000389386 KRTAP10-3P60369 221 aa9.86□□□□□ -0.83
VPS9D1-201ENST00000389386 FBN1P35555 2871 aaKnown RBP9.86□□□□□ -0.83
VPS9D1-201ENST00000389386 STAB1Q9NY15 2570 aa9.86□□□□□ -0.83
VPS9D1-201ENST00000389386 hDV103S1A0JD37 113 aa9.86□□□□□ -0.83
VPS9D1-201ENST00000389386 COX7BP24311 80 aa9.86□□□□□ -0.83
VPS9D1-201ENST00000389386 C10orf25Q5T742 122 aa9.84□□□□□ -0.83
VPS9D1-201ENST00000389386 DAD1P61803 113 aa9.84□□□□□ -0.83
VPS9D1-201ENST00000389386 CHCHD10Q8WYQ3 142 aaPredicted RBP9.84□□□□□ -0.83
VPS9D1-201ENST00000389386 Q1T7F1 81 aa9.84□□□□□ -0.84
VPS9D1-201ENST00000389386 UNQ6190/PRO20217Q6UXQ8 127 aa9.83□□□□□ -0.84
VPS9D1-201ENST00000389386 DIRC1Q969H9 104 aa9.83□□□□□ -0.84
VPS9D1-201ENST00000389386 Q6ZRP5 223 aa9.83□□□□□ -0.84
VPS9D1-201ENST00000389386 IGLV10-54A0A075B6I4 117 aa9.82□□□□□ -0.84
VPS9D1-201ENST00000389386 IGLV1-51P01701 117 aa9.82□□□□□ -0.84
VPS9D1-201ENST00000389386 GYPEP15421 78 aa9.82□□□□□ -0.84
VPS9D1-201ENST00000389386 COL6A5A8TX70 2615 aa9.81□□□□□ -0.84
VPS9D1-201ENST00000389386 CSNK1G2-AS1Q8NCQ2 148 aa9.81□□□□□ -0.84
VPS9D1-201ENST00000389386 C19orf73Q9NVV2 129 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms