RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 PAPPA-AS1Q5QFB9 102 aa5.36□□□□□ -1.55
IFT88-203ENST00000389373 MRPL18Q9H0U6 180 aaKnown RBP5.36□□□□□ -1.55
IFT88-203ENST00000389373 GEMIN7Q9H840 131 aaKnown RBP5.36□□□□□ -1.55
IFT88-203ENST00000389373 CDKN2A-AS1Q9UH64 79 aa5.36□□□□□ -1.55
IFT88-203ENST00000389373 SPINK1P00995 79 aa5.35□□□□□ -1.55
IFT88-203ENST00000389373 FABP9Q0Z7S8 132 aa5.35□□□□□ -1.55
IFT88-203ENST00000389373 KIAA1644Q3SXP7 199 aa5.35□□□□□ -1.55
IFT88-203ENST00000389373 AMELXQ99217 191 aa5.35□□□□□ -1.55
IFT88-203ENST00000389373 SMCO4Q9NRQ5 59 aa5.35□□□□□ -1.55
IFT88-203ENST00000389373 HERVK_113P63121 156 aa5.34□□□□□ -1.55
IFT88-203ENST00000389373 C2orf66Q6UXQ4 117 aa5.34□□□□□ -1.55
IFT88-203ENST00000389373 FA2HQ7L5A8 372 aa5.34□□□□□ -1.55
IFT88-203ENST00000389373 FAM19A3Q7Z5A8 133 aa5.34□□□□□ -1.55
IFT88-203ENST00000389373 COX7B2Q8TF08 81 aa5.34□□□□□ -1.55
IFT88-203ENST00000389373 SPRR4Q96PI1 79 aa5.34□□□□□ -1.55
IFT88-203ENST00000389373 TRAPPC1Q9Y5R8 145 aa5.34□□□□□ -1.55
IFT88-203ENST00000389373 IGLV8-61A0A075B6I0 122 aa5.33□□□□□ -1.56
IFT88-203ENST00000389373 IGIPA6NJ69 53 aa5.33□□□□□ -1.56
IFT88-203ENST00000389373 M0R378 163 aa5.33□□□□□ -1.56
IFT88-203ENST00000389373 SEC11AP67812 179 aa5.33□□□□□ -1.56
IFT88-203ENST00000389373 PFN2P35080 140 aa5.32□□□□□ -1.56
IFT88-203ENST00000389373 PCOTHQ58A44 107 aa5.32□□□□□ -1.56
IFT88-203ENST00000389373 TIMM17AQ99595 171 aa5.32□□□□□ -1.56
IFT88-203ENST00000389373 SMIM1B2RUZ4 78 aa5.31□□□□□ -1.56
IFT88-203ENST00000389373 ERASQ7Z444 233 aa5.31□□□□□ -1.56
IFT88-203ENST00000389373 SLC7A5P1Q8MH63 180 aa5.31□□□□□ -1.56
IFT88-203ENST00000389373 TOMM6Q96B49 74 aa5.31□□□□□ -1.56
IFT88-203ENST00000389373 ZNF706Q9Y5V0 76 aaPredicted RBP5.31□□□□□ -1.56
IFT88-203ENST00000389373 LINC01546A6NGU7 62 aa5.3□□□□□ -1.56
IFT88-203ENST00000389373 VPREB1P12018 145 aa5.3□□□□□ -1.56
IFT88-203ENST00000389373 PDZD11Q5EBL8 140 aa5.3□□□□□ -1.56
IFT88-203ENST00000389373 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
IFT88-203ENST00000389373 Q8N377 158 aa5.3□□□□□ -1.56
IFT88-203ENST00000389373 FAM19A2Q8N3H0 131 aa5.3□□□□□ -1.56
IFT88-203ENST00000389373 SCGB3A1Q96QR1 104 aa5.3□□□□□ -1.56
IFT88-203ENST00000389373 SPINK8P0C7L1 97 aa5.29□□□□□ -1.56
IFT88-203ENST00000389373 RPL24P83731 157 aaKnown RBP5.29□□□□□ -1.56
IFT88-203ENST00000389373 IGLV9-49A0A0B4J1Y8 123 aa5.28□□□□□ -1.56
IFT88-203ENST00000389373 SLC25A20O43772 301 aa5.28□□□□□ -1.56
IFT88-203ENST00000389373 ATP5LO75964 103 aa5.28□□□□□ -1.56
IFT88-203ENST00000389373 LINC00614P0C842 121 aa5.28□□□□□ -1.56
IFT88-203ENST00000389373 C18orf32Q8TCD1 76 aa5.28□□□□□ -1.56
IFT88-203ENST00000389373 YPEL4Q96NS1 127 aa5.28□□□□□ -1.56
IFT88-203ENST00000389373 HBDP02042 147 aa5.27□□□□□ -1.57
IFT88-203ENST00000389373 MOBPQ13875 183 aa5.27□□□□□ -1.57
IFT88-203ENST00000389373 COX6B2Q6YFQ2 88 aa5.27□□□□□ -1.57
IFT88-203ENST00000389373 SMCR5Q8TEV8 140 aa5.27□□□□□ -1.57
IFT88-203ENST00000389373 SND1-IT1Q9HBX3 110 aa5.27□□□□□ -1.57
IFT88-203ENST00000389373 PMVKQ15126 192 aa5.26□□□□□ -1.57
IFT88-203ENST00000389373 GAGE2AQ6NT46 116 aa5.26□□□□□ -1.57
IFT88-203ENST00000389373 CHCHD1Q96BP2 118 aaKnown RBP5.26□□□□□ -1.57
IFT88-203ENST00000389373 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
IFT88-203ENST00000389373 IGLV5-45A0A087WSX0 123 aa5.25□□□□□ -1.57
IFT88-203ENST00000389373 TINCRA0A1B0GVN0 87 aa5.25□□□□□ -1.57
IFT88-203ENST00000389373 C9orf92A6NGG3 77 aa5.25□□□□□ -1.57
IFT88-203ENST00000389373 A6NJY4 79 aa5.25□□□□□ -1.57
IFT88-203ENST00000389373 BAGE3Q86Y29 109 aa5.25□□□□□ -1.57
IFT88-203ENST00000389373 Q8NDZ9 215 aa5.25□□□□□ -1.57
IFT88-203ENST00000389373 ZNF625Q96I27 306 aaPredicted RBP5.25□□□□□ -1.57
IFT88-203ENST00000389373 CST9LQ9H4G1 147 aa5.25□□□□□ -1.57
IFT88-203ENST00000389373 H3BRM9 83 aa5.24□□□□□ -1.57
IFT88-203ENST00000389373 HSBP1O75506 76 aa5.24□□□□□ -1.57
IFT88-203ENST00000389373 TRGC2P03986 189 aa5.24□□□□□ -1.57
IFT88-203ENST00000389373 RPS29P62273 56 aaKnown RBP5.24□□□□□ -1.57
IFT88-203ENST00000389373 SSBP3-AS1Q7Z2R9 100 aa5.24□□□□□ -1.57
IFT88-203ENST00000389373 ERG28Q9UKR5 140 aa5.24□□□□□ -1.57
IFT88-203ENST00000389373 NDUFA6P56556 154 aa5.23□□□□□ -1.57
IFT88-203ENST00000389373 PMCHL1Q16048 86 aa5.22□□□□□ -1.57
IFT88-203ENST00000389373 URB1-AS1Q96HZ7 61 aa5.22□□□□□ -1.57
IFT88-203ENST00000389373 A0A096LNJ9 63 aa5.21□□□□□ -1.58
IFT88-203ENST00000389373 ETDCA0A1B0GVM5 59 aa5.21□□□□□ -1.58
IFT88-203ENST00000389373 COLCA2A8K830 154 aa5.21□□□□□ -1.58
IFT88-203ENST00000389373 IGLC3P0DOY3 106 aa5.2□□□□□ -1.58
IFT88-203ENST00000389373 LINC00483Q53H64 154 aa5.2□□□□□ -1.58
IFT88-203ENST00000389373 C9orf153Q5TBE3 101 aa5.2□□□□□ -1.58
IFT88-203ENST00000389373 IFI27L1Q96BM0 104 aa5.2□□□□□ -1.58
IFT88-203ENST00000389373 HSPB8Q9UJY1 196 aa5.2□□□□□ -1.58
IFT88-203ENST00000389373 TRAV12-1A0A0B4J245 112 aa5.19□□□□□ -1.58
IFT88-203ENST00000389373 IGLV5-39A0A0G2JS06 123 aa5.19□□□□□ -1.58
IFT88-203ENST00000389373 A0A0U1RRA0 63 aa5.19□□□□□ -1.58
IFT88-203ENST00000389373 PRYO14603 147 aa5.19□□□□□ -1.58
IFT88-203ENST00000389373 LINC00158P58513 81 aa5.19□□□□□ -1.58
IFT88-203ENST00000389373 COX17Q14061 63 aa5.19□□□□□ -1.58
IFT88-203ENST00000389373 SFTA2Q6UW10 78 aa5.19□□□□□ -1.58
IFT88-203ENST00000389373 NCR3O14931 201 aa5.18□□□□□ -1.58
IFT88-203ENST00000389373 SERF1AO75920 110 aa5.18□□□□□ -1.58
IFT88-203ENST00000389373 ERC2-IT1O76042 136 aa5.18□□□□□ -1.58
IFT88-203ENST00000389373 LEPROTL1O95214 131 aa5.18□□□□□ -1.58
IFT88-203ENST00000389373 TMEM170BQ5T4T1 132 aa5.18□□□□□ -1.58
IFT88-203ENST00000389373 CHTOPQ9Y3Y2 248 aaKnown RBP5.18□□□□□ -1.58
IFT88-203ENST00000389373 KRTAP4-16G5E9R7 235 aaPredicted RBP5.17□□□□□ -1.58
IFT88-203ENST00000389373 S100A1P23297 94 aa5.17□□□□□ -1.58
IFT88-203ENST00000389373 HRCT1Q6UXD1 115 aa5.17□□□□□ -1.58
IFT88-203ENST00000389373 IGLV6-57P01721 117 aa5.16□□□□□ -1.58
IFT88-203ENST00000389373 ZNF22P17026 224 aaPredicted RBP5.16□□□□□ -1.58
IFT88-203ENST00000389373 Q6Q795 121 aa5.16□□□□□ -1.58
IFT88-203ENST00000389373 C11orf86A6NJI1 115 aa5.15□□□□□ -1.59
IFT88-203ENST00000389373 H0Y8G0 127 aa5.15□□□□□ -1.59
IFT88-203ENST00000389373 ATP6V1G1O75348 118 aa5.15□□□□□ -1.59
IFT88-203ENST00000389373 PLNP26678 52 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms