RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 KRTAP19-2Q3LHN2 52 aa11.85□□□□□ -0.51
CNEP1R1-201ENST00000389134 CST9LQ9H4G1 147 aa11.85□□□□□ -0.51
CNEP1R1-201ENST00000389134 RPS29P62273 56 aaKnown RBP11.84□□□□□ -0.51
CNEP1R1-201ENST00000389134 Q8NDZ9 215 aa11.84□□□□□ -0.51
CNEP1R1-201ENST00000389134 LINC01549A6NIU2 74 aa11.83□□□□□ -0.52
CNEP1R1-201ENST00000389134 Q8N377 158 aa11.82□□□□□ -0.52
CNEP1R1-201ENST00000389134 PMVKQ15126 192 aa11.81□□□□□ -0.52
CNEP1R1-201ENST00000389134 IGLV5-39A0A0G2JS06 123 aa11.8□□□□□ -0.52
CNEP1R1-201ENST00000389134 SLC25A20O43772 301 aa11.8□□□□□ -0.52
CNEP1R1-201ENST00000389134 LORP23490 312 aaPredicted RBP11.78□□□□□ -0.52
CNEP1R1-201ENST00000389134 SMCR5Q8TEV8 140 aa11.78□□□□□ -0.52
CNEP1R1-201ENST00000389134 LINC00483Q53H64 154 aa11.77□□□□□ -0.53
CNEP1R1-201ENST00000389134 ANAPC16Q96DE5 110 aa11.77□□□□□ -0.53
CNEP1R1-201ENST00000389134 SSBP3-AS1Q7Z2R9 100 aa11.76□□□□□ -0.53
CNEP1R1-201ENST00000389134 ZNF625Q96I27 306 aaPredicted RBP11.76□□□□□ -0.53
CNEP1R1-201ENST00000389134 PRYO14603 147 aa11.75□□□□□ -0.53
CNEP1R1-201ENST00000389134 MT-ND4LP03901 98 aa11.75□□□□□ -0.53
CNEP1R1-201ENST00000389134 KRTAP10-6P60371 365 aaPredicted RBP11.75□□□□□ -0.53
CNEP1R1-201ENST00000389134 MOBPQ13875 183 aa11.74□□□□□ -0.53
CNEP1R1-201ENST00000389134 SFTA2Q6UW10 78 aa11.74□□□□□ -0.53
CNEP1R1-201ENST00000389134 IGLC3P0DOY3 106 aa11.73□□□□□ -0.53
CNEP1R1-201ENST00000389134 KIAA1644Q3SXP7 199 aa11.73□□□□□ -0.53
CNEP1R1-201ENST00000389134 LINC01546A6NGU7 62 aa11.72□□□□□ -0.53
CNEP1R1-201ENST00000389134 SPRR1AP35321 89 aa11.72□□□□□ -0.53
CNEP1R1-201ENST00000389134 GAGE2AQ6NT46 116 aa11.72□□□□□ -0.53
CNEP1R1-201ENST00000389134 IGLV9-49A0A0B4J1Y8 123 aa11.71□□□□□ -0.53
CNEP1R1-201ENST00000389134 ETDCA0A1B0GVM5 59 aa11.7□□□□□ -0.54
CNEP1R1-201ENST00000389134 ZNF22P17026 224 aaPredicted RBP11.7□□□□□ -0.54
CNEP1R1-201ENST00000389134 IGLV8-61A0A075B6I0 122 aa11.69□□□□□ -0.54
CNEP1R1-201ENST00000389134 LINC00158P58513 81 aa11.69□□□□□ -0.54
CNEP1R1-201ENST00000389134 KCNQ1DNQ9H478 68 aa11.69□□□□□ -0.54
CNEP1R1-201ENST00000389134 KRTAP4-16G5E9R7 235 aaPredicted RBP11.68□□□□□ -0.54
CNEP1R1-201ENST00000389134 PCOTHQ58A44 107 aa11.68□□□□□ -0.54
CNEP1R1-201ENST00000389134 hCG_2014768A0A024R1R8 64 aa11.65□□□□□ -0.54
CNEP1R1-201ENST00000389134 NDUFA6P56556 154 aa11.65□□□□□ -0.54
CNEP1R1-201ENST00000389134 M0R2T5 61 aa11.63□□□□□ -0.55
CNEP1R1-201ENST00000389134 FA2HQ7L5A8 372 aa11.62□□□□□ -0.55
CNEP1R1-201ENST00000389134 SMCO4Q9NRQ5 59 aa11.62□□□□□ -0.55
CNEP1R1-201ENST00000389134 A0A0U1RRA0 63 aa11.61□□□□□ -0.55
CNEP1R1-201ENST00000389134 KRTAP9-7A8MTY7 169 aa11.61□□□□□ -0.55
CNEP1R1-201ENST00000389134 BOD1L2Q8IYS8 172 aa11.61□□□□□ -0.55
CNEP1R1-201ENST00000389134 NCR3O14931 201 aa11.6□□□□□ -0.55
CNEP1R1-201ENST00000389134 ATP6V1G1O75348 118 aa11.6□□□□□ -0.55
CNEP1R1-201ENST00000389134 S100A12P80511 92 aa11.6□□□□□ -0.55
CNEP1R1-201ENST00000389134 FLGP20930 4061 aaPredicted RBP11.6□□□□□ -0.55
CNEP1R1-201ENST00000389134 B5MCH6 92 aa11.59□□□□□ -0.55
CNEP1R1-201ENST00000389134 ERC2-IT1O76042 136 aa11.59□□□□□ -0.55
CNEP1R1-201ENST00000389134 TMEM170BQ5T4T1 132 aa11.59□□□□□ -0.55
CNEP1R1-201ENST00000389134 TRBV10-3A0A0K0K1G6 114 aa11.58□□□□□ -0.56
CNEP1R1-201ENST00000389134 TRAV9-1A0A075B6T8 112 aa11.57□□□□□ -0.56
CNEP1R1-201ENST00000389134 C11orf86A6NJI1 115 aa11.56□□□□□ -0.56
CNEP1R1-201ENST00000389134 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.55□□□□□ -0.56
CNEP1R1-201ENST00000389134 C9orf153Q5TBE3 101 aa11.55□□□□□ -0.56
CNEP1R1-201ENST00000389134 SMIM13P0DJ93 91 aa11.54□□□□□ -0.56
CNEP1R1-201ENST00000389134 Q9BRP9 147 aa11.53□□□□□ -0.56
CNEP1R1-201ENST00000389134 C9orf92A6NGG3 77 aa11.52□□□□□ -0.57
CNEP1R1-201ENST00000389134 MIR7-3HGQ8N6C7 128 aa11.52□□□□□ -0.57
CNEP1R1-201ENST00000389134 A0A096LNJ9 63 aa11.51□□□□□ -0.57
CNEP1R1-201ENST00000389134 MEIG1Q5JSS6 88 aa11.51□□□□□ -0.57
CNEP1R1-201ENST00000389134 BAGE3Q86Y29 109 aa11.51□□□□□ -0.57
CNEP1R1-201ENST00000389134 Q6ZRX8 168 aa11.5□□□□□ -0.57
CNEP1R1-201ENST00000389134 COX6B2Q6YFQ2 88 aa11.49□□□□□ -0.57
CNEP1R1-201ENST00000389134 LIMD2Q9BT23 127 aa11.49□□□□□ -0.57
CNEP1R1-201ENST00000389134 LINC00587B1AMM8 73 aa11.47□□□□□ -0.57
CNEP1R1-201ENST00000389134 HBDP02042 147 aa11.47□□□□□ -0.57
CNEP1R1-201ENST00000389134 TMEM223A0PJW6 202 aa11.46□□□□□ -0.57
CNEP1R1-201ENST00000389134 DDTP30046 118 aa11.46□□□□□ -0.57
CNEP1R1-201ENST00000389134 HERV-K104P63124 156 aa11.46□□□□□ -0.57
CNEP1R1-201ENST00000389134 FABP9Q0Z7S8 132 aa11.46□□□□□ -0.57
CNEP1R1-201ENST00000389134 COX19Q49B96 90 aa11.46□□□□□ -0.57
CNEP1R1-201ENST00000389134 JOSD1Q15040 202 aaPredicted RBP11.44□□□□□ -0.58
CNEP1R1-201ENST00000389134 CHTOPQ9Y3Y2 248 aaKnown RBP11.44□□□□□ -0.58
CNEP1R1-201ENST00000389134 TRBV10-2A0A0K0K1G8 114 aa11.43□□□□□ -0.58
CNEP1R1-201ENST00000389134 IGLV6-57P01721 117 aa11.43□□□□□ -0.58
CNEP1R1-201ENST00000389134 LINC00614P0C842 121 aa11.43□□□□□ -0.58
CNEP1R1-201ENST00000389134 MAP1LC3CQ9BXW4 147 aa11.43□□□□□ -0.58
CNEP1R1-201ENST00000389134 S100PP25815 95 aa11.42□□□□□ -0.58
CNEP1R1-201ENST00000389134 URB1-AS1Q96HZ7 61 aa11.41□□□□□ -0.58
CNEP1R1-201ENST00000389134 C5orf52A6NGY3 159 aa11.4□□□□□ -0.58
CNEP1R1-201ENST00000389134 PMCHL1Q16048 86 aa11.4□□□□□ -0.58
CNEP1R1-201ENST00000389134 LOC107984156A0A0G2JMH3 177 aa11.39□□□□□ -0.59
CNEP1R1-201ENST00000389134 HRCT1Q6UXD1 115 aa11.39□□□□□ -0.59
CNEP1R1-201ENST00000389134 ARL17AQ8IVW1 177 aa11.39□□□□□ -0.59
CNEP1R1-201ENST00000389134 SEC11CQ9BY50 192 aa11.38□□□□□ -0.59
CNEP1R1-201ENST00000389134 ST20-AS1Q8NBB2 130 aa11.37□□□□□ -0.59
CNEP1R1-201ENST00000389134 MYMXA0A1B0GTQ4 84 aa11.36□□□□□ -0.59
CNEP1R1-201ENST00000389134 C18orf32Q8TCD1 76 aa11.36□□□□□ -0.59
CNEP1R1-201ENST00000389134 SPANXB1Q9NS25 103 aaPredicted RBP11.36□□□□□ -0.59
CNEP1R1-201ENST00000389134 S100A7L2Q5SY68 101 aa11.35□□□□□ -0.59
CNEP1R1-201ENST00000389134 TRAV12-1A0A0B4J245 112 aa11.34□□□□□ -0.59
CNEP1R1-201ENST00000389134 SLC25A34Q6PIV7 304 aa11.34□□□□□ -0.59
CNEP1R1-201ENST00000389134 TRAV23DV6A0A075B6W5 121 aa11.33□□□□□ -0.6
CNEP1R1-201ENST00000389134 RPL37P61927 97 aaKnown RBP11.33□□□□□ -0.6
CNEP1R1-201ENST00000389134 SSPOA2VEC9 5147 aa11.32□□□□□ -0.6
CNEP1R1-201ENST00000389134 SPRR1BP22528 89 aa11.31□□□□□ -0.6
CNEP1R1-201ENST00000389134 ZNF73O43830 326 aaPredicted RBP11.3□□□□□ -0.6
CNEP1R1-201ENST00000389134 MIEN1Q9BRT3 115 aa11.3□□□□□ -0.6
CNEP1R1-201ENST00000389134 USH2AO75445 5202 aa11.3□□□□□ -0.6
CNEP1R1-201ENST00000389134 NDUFC2O95298 119 aa11.29□□□□□ -0.6
CNEP1R1-201ENST00000389134 CD164Q04900 197 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms