RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 NXT2Q9NPJ8 142 aaKnown RBP-0.09□□□□□ -2.42
RNU6-42P-201ENST00000384165 CDKN2A-AS1Q9UH64 79 aa-0.09□□□□□ -2.42
RNU6-42P-201ENST00000384165 HSPB8Q9UJY1 196 aa-0.09□□□□□ -2.42
RNU6-42P-201ENST00000384165 ERG28Q9UKR5 140 aa-0.09□□□□□ -2.42
RNU6-42P-201ENST00000384165 EPDR1Q9UM22 224 aa-0.09□□□□□ -2.42
RNU6-42P-201ENST00000384165 ZFP30Q9Y2G7 519 aa-0.09□□□□□ -2.42
RNU6-42P-201ENST00000384165 AK6Q9Y3D8 172 aaKnown RBP-0.09□□□□□ -2.42
RNU6-42P-201ENST00000384165 STRAPQ9Y3F4 350 aaKnown RBP-0.09□□□□□ -2.42
RNU6-42P-201ENST00000384165 SAR1BQ9Y6B6 198 aa-0.09□□□□□ -2.42
RNU6-42P-201ENST00000384165 IGLV4-3A0A075B6K6 122 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 TRAV23DV6A0A075B6W5 121 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 TRBV6-5A0A0K0K1A5 114 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 TRBV27A0A0K0K1C4 114 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 A0A0U1RRA0 63 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 A0A1B0GVX0 72 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 SERTM2A0A1B0GWG4 89 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 TMEM223A0PJW6 202 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 SMIM1B2RUZ4 78 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 C8orf87E5RJ46 101 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 TCAPO15273 167 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 GNAO1P09471 354 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 GIPP09681 153 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 METTL15P1P0C7V9 234 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 TRGC1P0CF51 173 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 MYL9P24844 172 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 PRDX6P30041 224 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 RCVRNP35243 200 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 RPL29P47914 159 aaKnown RBP-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 POLR2KP53803 58 aaKnown RBP-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 LINC00158P58513 81 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 MRPS36P82909 103 aaKnown RBP-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 COX17Q14061 63 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 IL18Q14116 193 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 PMVKQ15126 192 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 Q5BKY6 102 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 PDZD11Q5EBL8 140 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 S100A7L2Q5SY68 101 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 C5orf17Q8NAS9 161 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 GLYATL2Q8WU03 294 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 ANAPC16Q96DE5 110 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 MRPL18Q9H0U6 180 aaKnown RBP-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 CST9LQ9H4G1 147 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 ST20Q9HBF5 79 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 SPANXA1Q9NS26 97 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 TNFSF18Q9UNG2 199 aa-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 UTP11Q9Y3A2 253 aaKnown RBP-0.1□□□□□ -2.43
RNU6-42P-201ENST00000384165 TRAV18A0A075B6X5 111 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 TRAV13-2A0A0B4J235 113 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 TRBV10-2A0A0K0K1G8 114 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 IFITM5A6NNB3 132 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 A8MU10 97 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 H3BUT2 72 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 PEX7O00628 323 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 BIRC5O15392 142 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 ATP5HO75947 161 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 PPP1R17O96001 155 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 TNP1P09430 55 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 H2AFB2P0C5Z0 115 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 SPINK8P0C7L1 97 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 ANXA3P12429 323 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 POLR2IP36954 125 aaKnown RBP-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 IFI27P40305 119 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 AKR1C3P42330 323 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 HERVK_113P63121 156 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 MRPL51Q4U2R6 128 aaKnown RBP-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 OCIAD2Q56VL3 154 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 AKR1C8PQ5T2L2 129 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 TEX261Q6UWH6 196 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 LINC00575Q6W349 94 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 TEX43Q6ZNM6 134 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 RAB37Q96AX2 223 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 FMC1Q96HJ9 113 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 TMEM141Q96I45 108 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 PAIP2Q9BPZ3 127 aaKnown RBP-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 C2orf88Q9BSF0 95 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 KRTAP3-2Q9BYR7 98 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 WDR61Q9GZS3 305 aaKnown RBP-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 PSENENQ9NZ42 101 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 SCP2D1Q9UJQ7 156 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 WDR83OSQ9Y284 106 aa-0.11□□□□□ -2.43
RNU6-42P-201ENST00000384165 LOC389332A0A1B0GUA5 103 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 UBE2L5PA0A1B0GUS4 154 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 C7orf66A4D0T2 115 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 BBIP1A8MTZ0 92 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 HMGB1P1B2RPK0 211 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 GNGT2O14610 69 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 HMGB3O15347 200 aaKnown RBP-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 RGS16O15492 202 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 NDUFS5O43920 106 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 ATP6V1G1O75348 118 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 SCGNO76038 276 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 RAB3DO95716 219 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 UCHL1P09936 223 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 H2AFB1P0C5Y9 115 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 COX7BP24311 80 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 DAPP51397 102 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 ELOF1P60002 83 aaKnown RBP-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 SUMO1P63165 101 aaKnown RBP-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 SEC11AP67812 179 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 FABP5Q01469 135 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms