RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 COX17Q14061 63 aa10.32□□□□□ -0.76
RPUSD3-201ENST00000383820 IGLC3P0DOY3 106 aa10.31□□□□□ -0.76
RPUSD3-201ENST00000383820 SND1-IT1Q9HBX3 110 aa10.31□□□□□ -0.76
RPUSD3-201ENST00000383820 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
RPUSD3-201ENST00000383820 URB1-AS1Q96HZ7 61 aa10.3□□□□□ -0.76
RPUSD3-201ENST00000383820 ERG28Q9UKR5 140 aa10.3□□□□□ -0.76
RPUSD3-201ENST00000383820 MUC17Q685J3 4493 aa10.29□□□□□ -0.76
RPUSD3-201ENST00000383820 TMEM238C9JI98 176 aa10.29□□□□□ -0.76
RPUSD3-201ENST00000383820 M0R378 163 aa10.29□□□□□ -0.76
RPUSD3-201ENST00000383820 A0A096LNJ9 63 aa10.28□□□□□ -0.76
RPUSD3-201ENST00000383820 YPEL4Q96NS1 127 aa10.28□□□□□ -0.76
RPUSD3-201ENST00000383820 ZNF22P17026 224 aaPredicted RBP10.27□□□□□ -0.77
RPUSD3-201ENST00000383820 SPAG11AQ6PDA7 123 aa10.27□□□□□ -0.77
RPUSD3-201ENST00000383820 SFTA2Q6UW10 78 aa10.27□□□□□ -0.77
RPUSD3-201ENST00000383820 PPDPFQ9H3Y8 114 aa10.26□□□□□ -0.77
RPUSD3-201ENST00000383820 BAGE3Q86Y29 109 aa10.25□□□□□ -0.77
RPUSD3-201ENST00000383820 C3orf22Q8N5N4 141 aa10.25□□□□□ -0.77
RPUSD3-201ENST00000383820 TRGC2P03986 189 aa10.23□□□□□ -0.77
RPUSD3-201ENST00000383820 FP248Q71RG6 208 aaPredicted RBP10.23□□□□□ -0.77
RPUSD3-201ENST00000383820 Q8NDZ9 215 aa10.23□□□□□ -0.77
RPUSD3-201ENST00000383820 CHCHD1Q96BP2 118 aaKnown RBP10.23□□□□□ -0.77
RPUSD3-201ENST00000383820 HIGD2AQ9BW72 106 aa10.23□□□□□ -0.77
RPUSD3-201ENST00000383820 HSBP1O75506 76 aa10.22□□□□□ -0.77
RPUSD3-201ENST00000383820 TMEM170BQ5T4T1 132 aa10.22□□□□□ -0.77
RPUSD3-201ENST00000383820 ZNF625Q96I27 306 aaPredicted RBP10.22□□□□□ -0.77
RPUSD3-201ENST00000383820 SPRR4Q96PI1 79 aa10.21□□□□□ -0.77
RPUSD3-201ENST00000383820 H0Y8G0 127 aa10.2□□□□□ -0.78
RPUSD3-201ENST00000383820 IFI27L1Q96BM0 104 aa10.2□□□□□ -0.78
RPUSD3-201ENST00000383820 CHTOPQ9Y3Y2 248 aaKnown RBP10.2□□□□□ -0.78
RPUSD3-201ENST00000383820 ZNF706Q9Y5V0 76 aaPredicted RBP10.2□□□□□ -0.78
RPUSD3-201ENST00000383820 C11orf86A6NJI1 115 aa10.19□□□□□ -0.78
RPUSD3-201ENST00000383820 C4orf48Q5BLP8 95 aa10.19□□□□□ -0.78
RPUSD3-201ENST00000383820 FAM19A2Q8N3H0 131 aa10.19□□□□□ -0.78
RPUSD3-201ENST00000383820 KRTAP9-6A0A140TA67 174 aa10.18□□□□□ -0.78
RPUSD3-201ENST00000383820 LINC00158P58513 81 aa10.16□□□□□ -0.78
RPUSD3-201ENST00000383820 SERF1AO75920 110 aa10.15□□□□□ -0.78
RPUSD3-201ENST00000383820 LINC00337Q8N6G1 96 aa10.15□□□□□ -0.78
RPUSD3-201ENST00000383820 PRYO14603 147 aa10.14□□□□□ -0.79
RPUSD3-201ENST00000383820 KRTAP13-3Q3SY46 172 aa10.14□□□□□ -0.79
RPUSD3-201ENST00000383820 Q8NBF4 154 aa10.13□□□□□ -0.79
RPUSD3-201ENST00000383820 TRAV12-1A0A0B4J245 112 aa10.12□□□□□ -0.79
RPUSD3-201ENST00000383820 COLCA2A8K830 154 aa10.12□□□□□ -0.79
RPUSD3-201ENST00000383820 LEPROTL1O95214 131 aa10.12□□□□□ -0.79
RPUSD3-201ENST00000383820 SPINK1P00995 79 aa10.12□□□□□ -0.79
RPUSD3-201ENST00000383820 SPRR1AP35321 89 aa10.12□□□□□ -0.79
RPUSD3-201ENST00000383820 ASB16-AS1Q495Z4 193 aa10.12□□□□□ -0.79
RPUSD3-201ENST00000383820 FABP4P15090 132 aa10.11□□□□□ -0.79
RPUSD3-201ENST00000383820 KCNQ1DNQ9H478 68 aa10.11□□□□□ -0.79
RPUSD3-201ENST00000383820 A0A0U1RRA0 63 aa10.1□□□□□ -0.79
RPUSD3-201ENST00000383820 TMEM223A0PJW6 202 aa10.1□□□□□ -0.79
RPUSD3-201ENST00000383820 ATP6V1G1O75348 118 aa10.1□□□□□ -0.79
RPUSD3-201ENST00000383820 DAND5Q8N907 189 aa10.1□□□□□ -0.79
RPUSD3-201ENST00000383820 SMCR5Q8TEV8 140 aa10.1□□□□□ -0.79
RPUSD3-201ENST00000383820 BOD1L2Q8IYS8 172 aa10.09□□□□□ -0.79
RPUSD3-201ENST00000383820 HSPB8Q9UJY1 196 aa10.09□□□□□ -0.79
RPUSD3-201ENST00000383820 ETDCA0A1B0GVM5 59 aa10.08□□□□□ -0.8
RPUSD3-201ENST00000383820 KRTAP4-16G5E9R7 235 aaPredicted RBP10.08□□□□□ -0.8
RPUSD3-201ENST00000383820 LINC00310P59036 64 aa10.08□□□□□ -0.8
RPUSD3-201ENST00000383820 LINC00483Q53H64 154 aa10.08□□□□□ -0.8
RPUSD3-201ENST00000383820 SMIM13P0DJ93 91 aa10.07□□□□□ -0.8
RPUSD3-201ENST00000383820 HERV-K104P63124 156 aa10.07□□□□□ -0.8
RPUSD3-201ENST00000383820 LINC00587B1AMM8 73 aa10.06□□□□□ -0.8
RPUSD3-201ENST00000383820 SEC61BP60468 96 aaKnown RBP10.06□□□□□ -0.8
RPUSD3-201ENST00000383820 RPS29P62273 56 aaKnown RBP10.06□□□□□ -0.8
RPUSD3-201ENST00000383820 MEIG1Q5JSS6 88 aa10.06□□□□□ -0.8
RPUSD3-201ENST00000383820 MIR7-3HGQ8N6C7 128 aa10.06□□□□□ -0.8
RPUSD3-201ENST00000383820 NCR3O14931 201 aa10.05□□□□□ -0.8
RPUSD3-201ENST00000383820 LINC01547P58512 204 aaPredicted RBP10.05□□□□□ -0.8
RPUSD3-201ENST00000383820 S100A12P80511 92 aa10.05□□□□□ -0.8
RPUSD3-201ENST00000383820 NDUFA12Q9UI09 145 aa10.05□□□□□ -0.8
RPUSD3-201ENST00000383820 PMCHL2Q9BQD1 86 aa10.04□□□□□ -0.8
RPUSD3-201ENST00000383820 TRBV10-3A0A0K0K1G6 114 aa10.03□□□□□ -0.8
RPUSD3-201ENST00000383820 SSBP3-AS1Q7Z2R9 100 aa10.03□□□□□ -0.8
RPUSD3-201ENST00000383820 PLNP26678 52 aa10.02□□□□□ -0.81
RPUSD3-201ENST00000383820 MAP1LC3CQ9BXW4 147 aa10.02□□□□□ -0.81
RPUSD3-201ENST00000383820 DPM2O94777 84 aa10.01□□□□□ -0.81
RPUSD3-201ENST00000383820 HERVK_113P61574 105 aa10.01□□□□□ -0.81
RPUSD3-201ENST00000383820 GAGE2AQ6NT46 116 aa10.01□□□□□ -0.81
RPUSD3-201ENST00000383820 B5MCH6 92 aa10□□□□□ -0.81
RPUSD3-201ENST00000383820 Q8N377 158 aa10□□□□□ -0.81
RPUSD3-201ENST00000383820 KRTAP4-1Q9BYQ7 146 aa10□□□□□ -0.81
RPUSD3-201ENST00000383820 LOC107984156A0A0G2JMH3 177 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 MYMXA0A1B0GTQ4 84 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 HIST1H2BKO60814 126 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 IGKCP01834 107 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 HIST1H2BJP06899 126 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 HIST1H2BOP23527 126 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 HIST1H2BBP33778 126 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 HIST1H2BDP58876 126 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 HIST1H2BCP62807 126 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 MOBPQ13875 183 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 HIST2H2BEQ16778 126 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 ARL17AQ8IVW1 177 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 HIST1H2BHQ93079 126 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 HIST1H2BNQ99877 126 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 HIST1H2BMQ99879 126 aa9.99□□□□□ -0.81
RPUSD3-201ENST00000383820 IGLV9-49A0A0B4J1Y8 123 aa9.98□□□□□ -0.81
RPUSD3-201ENST00000383820 SLC25A20O43772 301 aa9.98□□□□□ -0.81
RPUSD3-201ENST00000383820 TRBV10-2A0A0K0K1G8 114 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms